Protein–RNA interactions for Protein: Q9HAW0

BRF2, Transcription factor IIIB 50 kDa subunit, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2Q9HAW0 RPS29P33-201ENST00000456717 146 ntBASIC3.97□□□□□ -1.77
BRF2Q9HAW0 AC010285.1-201ENST00000470580 392 ntBASIC3.97□□□□□ -1.77
BRF2Q9HAW0 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC3.97□□□□□ -1.77
BRF2Q9HAW0 RN7SL271P-201ENST00000487601 295 ntBASIC3.97□□□□□ -1.77
BRF2Q9HAW0 AC106872.3-201ENST00000495104 446 ntBASIC3.97□□□□□ -1.77
BRF2Q9HAW0 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC3.97□□□□□ -1.77
BRF2Q9HAW0 AC093534.1-201ENST00000504977 132 ntBASIC3.97□□□□□ -1.77
BRF2Q9HAW0 AC005178.1-201ENST00000508392 440 ntBASIC3.97□□□□□ -1.77
BRF2Q9HAW0 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC3.97□□□□□ -1.77
BRF2Q9HAW0 MEF2C-AS1-208ENST00000512585 741 ntTSL 5 BASIC3.97□□□□□ -1.77
BRF2Q9HAW0 RNU6-1095P-201ENST00000516148 108 ntBASIC3.97□□□□□ -1.77
BRF2Q9HAW0 Y_RNA.688-201ENST00000516565 95 ntBASIC3.97□□□□□ -1.77
BRF2Q9HAW0 IGKV2-38-201ENST00000517443 247 ntBASIC3.97□□□□□ -1.77
BRF2Q9HAW0 OR5AP1P-201ENST00000529730 940 ntBASIC3.97□□□□□ -1.77
BRF2Q9HAW0 OR5D17P-201ENST00000531492 978 ntBASIC3.97□□□□□ -1.77
BRF2Q9HAW0 CR383656.7-201ENST00000548164 174 ntBASIC3.97□□□□□ -1.77
BRF2Q9HAW0 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC3.97□□□□□ -1.77
BRF2Q9HAW0 AC126177.3-201ENST00000551839 688 ntBASIC3.97□□□□□ -1.77
BRF2Q9HAW0 AC026888.1-201ENST00000553348 559 ntTSL 4 BASIC3.97□□□□□ -1.77
BRF2Q9HAW0 LINC00520-201ENST00000554186 831 ntTSL 5 BASIC3.97□□□□□ -1.77
BRF2Q9HAW0 TVP23BP1-201ENST00000557500 617 ntBASIC3.97□□□□□ -1.77
BRF2Q9HAW0 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC3.97□□□□□ -1.77
BRF2Q9HAW0 AC141257.3-201ENST00000572906 215 ntBASIC3.97□□□□□ -1.77
BRF2Q9HAW0 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC3.97□□□□□ -1.77
BRF2Q9HAW0 VN1R79P-201ENST00000593540 513 ntBASIC3.97□□□□□ -1.77
BRF2Q9HAW0 AL049634.3-201ENST00000604968 457 ntBASIC3.97□□□□□ -1.77
BRF2Q9HAW0 AC006023.2-201ENST00000609916 167 ntBASIC3.97□□□□□ -1.77
BRF2Q9HAW0 AL356266.1-201ENST00000623311 483 ntBASIC3.97□□□□□ -1.77
BRF2Q9HAW0 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
BRF2Q9HAW0 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
BRF2Q9HAW0 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
BRF2Q9HAW0 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
BRF2Q9HAW0 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC3.97□□□□□ -1.77
BRF2Q9HAW0 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
BRF2Q9HAW0 LCA5L-201ENST00000288350 2416 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.77
BRF2Q9HAW0 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC3.96□□□□□ -1.78
BRF2Q9HAW0 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
BRF2Q9HAW0 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
BRF2Q9HAW0 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.78
BRF2Q9HAW0 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
BRF2Q9HAW0 RNU5F-7P-201ENST00000363696 115 ntBASIC3.96□□□□□ -1.78
BRF2Q9HAW0 Y_RNA.234-201ENST00000364409 97 ntBASIC3.96□□□□□ -1.78
BRF2Q9HAW0 RNU6-359P-201ENST00000365466 108 ntBASIC3.96□□□□□ -1.78
BRF2Q9HAW0 TRGV8-201ENST00000390343 468 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
BRF2Q9HAW0 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
BRF2Q9HAW0 AC007066.1-201ENST00000392902 381 ntBASIC3.96□□□□□ -1.78
BRF2Q9HAW0 JKAMPP1-201ENST00000413804 919 ntBASIC3.96□□□□□ -1.78
BRF2Q9HAW0 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC3.96□□□□□ -1.78
BRF2Q9HAW0 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC3.96□□□□□ -1.78
BRF2Q9HAW0 LSM1P1-201ENST00000438629 273 ntBASIC3.96□□□□□ -1.78
BRF2Q9HAW0 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC3.96□□□□□ -1.78
BRF2Q9HAW0 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC3.96□□□□□ -1.78
BRF2Q9HAW0 snoU13.24-201ENST00000458998 104 ntBASIC3.96□□□□□ -1.78
BRF2Q9HAW0 RPS4XP15-201ENST00000489210 795 ntBASIC3.96□□□□□ -1.78
BRF2Q9HAW0 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC3.96□□□□□ -1.78
BRF2Q9HAW0 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
BRF2Q9HAW0 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC3.96□□□□□ -1.78
BRF2Q9HAW0 MTCO1P49-201ENST00000523429 802 ntBASIC3.96□□□□□ -1.78
BRF2Q9HAW0 AC087276.1-201ENST00000529659 480 ntBASIC3.96□□□□□ -1.78
BRF2Q9HAW0 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC3.96□□□□□ -1.78
BRF2Q9HAW0 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC3.96□□□□□ -1.78
BRF2Q9HAW0 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC3.96□□□□□ -1.78
BRF2Q9HAW0 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC3.96□□□□□ -1.78
BRF2Q9HAW0 LINC01491-202ENST00000558792 439 ntTSL 3 BASIC3.96□□□□□ -1.78
BRF2Q9HAW0 APOOP5-203ENST00000565921 410 ntTSL 3 BASIC3.96□□□□□ -1.78
BRF2Q9HAW0 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC3.96□□□□□ -1.78
BRF2Q9HAW0 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC3.96□□□□□ -1.78
BRF2Q9HAW0 AC022655.2-201ENST00000577280 318 ntBASIC3.96□□□□□ -1.78
BRF2Q9HAW0 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC3.96□□□□□ -1.78
BRF2Q9HAW0 AC007687.1-201ENST00000602704 304 ntBASIC3.96□□□□□ -1.78
BRF2Q9HAW0 MTCYBP22-201ENST00000603788 447 ntBASIC3.96□□□□□ -1.78
BRF2Q9HAW0 AC012603.1-201ENST00000606424 528 ntBASIC3.96□□□□□ -1.78
BRF2Q9HAW0 AC107214.2-201ENST00000608204 634 ntBASIC3.96□□□□□ -1.78
BRF2Q9HAW0 AC026422.1-201ENST00000623961 452 ntBASIC3.96□□□□□ -1.78
BRF2Q9HAW0 CGA-204ENST00000627148 1010 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
BRF2Q9HAW0 AC092192.1-201ENST00000633154 1018 ntBASIC3.96□□□□□ -1.78
BRF2Q9HAW0 LINC01709-202ENST00000635702 1204 ntTSL 5 BASIC3.96□□□□□ -1.78
BRF2Q9HAW0 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC3.96□□□□□ -1.78
BRF2Q9HAW0 MTND4P16-201ENST00000466108 1367 ntBASIC3.96□□□□□ -1.78
BRF2Q9HAW0 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
BRF2Q9HAW0 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
BRF2Q9HAW0 AC092447.10-201ENST00000620607 1652 ntBASIC3.96□□□□□ -1.78
BRF2Q9HAW0 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC3.96□□□□□ -1.78
BRF2Q9HAW0 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.78
BRF2Q9HAW0 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.78
BRF2Q9HAW0 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
BRF2Q9HAW0 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
BRF2Q9HAW0 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC3.95□□□□□ -1.78
BRF2Q9HAW0 AC068254.2-201ENST00000623938 3577 ntBASIC3.95□□□□□ -1.78
BRF2Q9HAW0 AC008725.1-201ENST00000605123 2263 ntBASIC3.95□□□□□ -1.78
BRF2Q9HAW0 MARK2P15-201ENST00000432204 2186 ntBASIC3.95□□□□□ -1.78
BRF2Q9HAW0 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC3.95□□□□□ -1.78
BRF2Q9HAW0 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC3.95□□□□□ -1.78
BRF2Q9HAW0 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC3.95□□□□□ -1.78
BRF2Q9HAW0 AC007685.1-201ENST00000329806 452 ntBASIC3.95□□□□□ -1.78
BRF2Q9HAW0 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
BRF2Q9HAW0 RNU6-500P-201ENST00000362349 107 ntBASIC3.95□□□□□ -1.78
BRF2Q9HAW0 RNU6-777P-201ENST00000364265 104 ntBASIC3.95□□□□□ -1.78
BRF2Q9HAW0 SNORD3H-201ENST00000384486 214 ntBASIC3.95□□□□□ -1.78
BRF2Q9HAW0 AL031577.2-201ENST00000404133 280 ntBASIC3.95□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 81.8 ms