Protein–RNA interactions for Protein: Q9H9Y6

POLR1B, DNA-directed RNA polymerase I subunit RPA2, humanhuman

Predictions only

Length 1,135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1BQ9H9Y6 CLIC4P2-201ENST00000601934 717 ntBASIC4.03□□□□□ -1.76
POLR1BQ9H9Y6 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC4.03□□□□□ -1.76
POLR1BQ9H9Y6 AC025946.2-201ENST00000603398 234 ntBASIC4.03□□□□□ -1.76
POLR1BQ9H9Y6 RNU6-88P-201ENST00000606801 100 ntBASIC4.03□□□□□ -1.76
POLR1BQ9H9Y6 AL357080.1-201ENST00000617394 239 ntBASIC4.03□□□□□ -1.76
POLR1BQ9H9Y6 AC244100.1-202ENST00000621554 382 ntBASIC4.03□□□□□ -1.76
POLR1BQ9H9Y6 AC120349.3-201ENST00000624377 529 ntBASIC4.03□□□□□ -1.76
POLR1BQ9H9Y6 AC019226.2-201ENST00000625973 424 ntBASIC4.03□□□□□ -1.76
POLR1BQ9H9Y6 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
POLR1BQ9H9Y6 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
POLR1BQ9H9Y6 MTND2P41-201ENST00000637599 773 ntBASIC4.03□□□□□ -1.76
POLR1BQ9H9Y6 AC103706.2-201ENST00000638080 240 ntBASIC4.03□□□□□ -1.76
POLR1BQ9H9Y6 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC4.03□□□□□ -1.76
POLR1BQ9H9Y6 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC4.03□□□□□ -1.76
POLR1BQ9H9Y6 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC4.03□□□□□ -1.76
POLR1BQ9H9Y6 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
POLR1BQ9H9Y6 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
POLR1BQ9H9Y6 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC4.02□□□□□ -1.77
POLR1BQ9H9Y6 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC4.02□□□□□ -1.77
POLR1BQ9H9Y6 OR11H4-201ENST00000315409 1082 ntBASIC4.02□□□□□ -1.77
POLR1BQ9H9Y6 Y_RNA.333-201ENST00000365274 102 ntBASIC4.02□□□□□ -1.77
POLR1BQ9H9Y6 U3.29-201ENST00000391296 212 ntBASIC4.02□□□□□ -1.77
POLR1BQ9H9Y6 RN7SKP56-201ENST00000410513 331 ntBASIC4.02□□□□□ -1.77
POLR1BQ9H9Y6 PIGPP2-201ENST00000411569 458 ntBASIC4.02□□□□□ -1.77
POLR1BQ9H9Y6 TPMTP2-201ENST00000414372 726 ntBASIC4.02□□□□□ -1.77
POLR1BQ9H9Y6 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC4.02□□□□□ -1.77
POLR1BQ9H9Y6 GLRXP1-201ENST00000423261 334 ntBASIC4.02□□□□□ -1.77
POLR1BQ9H9Y6 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
POLR1BQ9H9Y6 LAMTOR3P1-201ENST00000428620 370 ntBASIC4.02□□□□□ -1.77
POLR1BQ9H9Y6 AL445584.1-201ENST00000431451 330 ntBASIC4.02□□□□□ -1.77
POLR1BQ9H9Y6 GOT2P5-201ENST00000433995 546 ntBASIC4.02□□□□□ -1.77
POLR1BQ9H9Y6 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC4.02□□□□□ -1.77
POLR1BQ9H9Y6 SNRPEP7-201ENST00000438350 220 ntBASIC4.02□□□□□ -1.77
POLR1BQ9H9Y6 RPL23AP89-201ENST00000439324 255 ntBASIC4.02□□□□□ -1.77
POLR1BQ9H9Y6 HSPE1P28-201ENST00000443139 211 ntBASIC4.02□□□□□ -1.77
POLR1BQ9H9Y6 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC4.02□□□□□ -1.77
POLR1BQ9H9Y6 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC4.02□□□□□ -1.77
POLR1BQ9H9Y6 SNRPGP5-201ENST00000456003 220 ntBASIC4.02□□□□□ -1.77
POLR1BQ9H9Y6 RPL7P15-201ENST00000461190 712 ntBASIC4.02□□□□□ -1.77
POLR1BQ9H9Y6 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
POLR1BQ9H9Y6 AC006517.1-201ENST00000480485 328 ntBASIC4.02□□□□□ -1.77
POLR1BQ9H9Y6 FAM172BP-201ENST00000487497 1089 ntBASIC4.02□□□□□ -1.77
POLR1BQ9H9Y6 AC093752.2-201ENST00000506942 573 ntTSL 5 BASIC4.02□□□□□ -1.77
POLR1BQ9H9Y6 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC4.02□□□□□ -1.77
POLR1BQ9H9Y6 AC090193.1-201ENST00000518633 543 ntTSL 4 BASIC4.02□□□□□ -1.77
POLR1BQ9H9Y6 IGKV2-23-201ENST00000518729 323 ntBASIC4.02□□□□□ -1.77
POLR1BQ9H9Y6 AC022861.1-201ENST00000522981 663 ntBASIC4.02□□□□□ -1.77
POLR1BQ9H9Y6 NAP1L1P1-201ENST00000524793 1063 ntBASIC4.02□□□□□ -1.77
POLR1BQ9H9Y6 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
POLR1BQ9H9Y6 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC4.02□□□□□ -1.77
POLR1BQ9H9Y6 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC4.02□□□□□ -1.77
POLR1BQ9H9Y6 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC4.02□□□□□ -1.77
POLR1BQ9H9Y6 AC020914.6-201ENST00000594327 272 ntBASIC4.02□□□□□ -1.77
POLR1BQ9H9Y6 AC006539.2-201ENST00000601729 572 ntBASIC4.02□□□□□ -1.77
POLR1BQ9H9Y6 AC106791.2-201ENST00000604680 391 ntBASIC4.02□□□□□ -1.77
POLR1BQ9H9Y6 AC018638.7-201ENST00000605836 1114 ntBASIC4.02□□□□□ -1.77
POLR1BQ9H9Y6 AL360219.1-201ENST00000610230 366 ntBASIC4.02□□□□□ -1.77
POLR1BQ9H9Y6 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC4.02□□□□□ -1.77
POLR1BQ9H9Y6 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC4.02□□□□□ -1.77
POLR1BQ9H9Y6 AC004009.2-201ENST00000623016 728 ntBASIC4.02□□□□□ -1.77
POLR1BQ9H9Y6 CCT7-217ENST00000626868 249 ntTSL 5 BASIC4.02□□□□□ -1.77
POLR1BQ9H9Y6 TEX41-265ENST00000627785 704 ntTSL 5 BASIC4.02□□□□□ -1.77
POLR1BQ9H9Y6 TTN-AS1-267ENST00000628826 662 ntTSL 5 BASIC4.02□□□□□ -1.77
POLR1BQ9H9Y6 AC097655.1-201ENST00000635075 318 ntBASIC4.02□□□□□ -1.77
POLR1BQ9H9Y6 OR11H4-203ENST00000641525 1082 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
POLR1BQ9H9Y6 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
POLR1BQ9H9Y6 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC4.02□□□□□ -1.77
POLR1BQ9H9Y6 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
POLR1BQ9H9Y6 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC4.01□□□□□ -1.77
POLR1BQ9H9Y6 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC4.01□□□□□ -1.77
POLR1BQ9H9Y6 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC4.01□□□□□ -1.77
POLR1BQ9H9Y6 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC4.01□□□□□ -1.77
POLR1BQ9H9Y6 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC4.01□□□□□ -1.77
POLR1BQ9H9Y6 OR5H2-201ENST00000355273 945 ntBASIC4.01□□□□□ -1.77
POLR1BQ9H9Y6 RNU6-462P-201ENST00000362659 105 ntBASIC4.01□□□□□ -1.77
POLR1BQ9H9Y6 RNU6-1200P-201ENST00000384162 107 ntBASIC4.01□□□□□ -1.77
POLR1BQ9H9Y6 AL590084.2-201ENST00000401481 382 ntBASIC4.01□□□□□ -1.77
POLR1BQ9H9Y6 AL590704.1-201ENST00000402856 794 ntBASIC4.01□□□□□ -1.77
POLR1BQ9H9Y6 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC4.01□□□□□ -1.77
POLR1BQ9H9Y6 AC004543.1-201ENST00000418764 369 ntTSL 5 BASIC4.01□□□□□ -1.77
POLR1BQ9H9Y6 ZYG11AP1-201ENST00000430329 837 ntBASIC4.01□□□□□ -1.77
POLR1BQ9H9Y6 MRPS18BP2-201ENST00000434310 759 ntBASIC4.01□□□□□ -1.77
POLR1BQ9H9Y6 AL445259.1-202ENST00000434768 379 ntTSL 3 BASIC4.01□□□□□ -1.77
POLR1BQ9H9Y6 RPL7P28-201ENST00000437739 740 ntBASIC4.01□□□□□ -1.77
POLR1BQ9H9Y6 AF228730.2-201ENST00000438784 848 ntBASIC4.01□□□□□ -1.77
POLR1BQ9H9Y6 MTND5P2-201ENST00000442927 1142 ntBASIC4.01□□□□□ -1.77
POLR1BQ9H9Y6 AL157359.1-201ENST00000449840 424 ntTSL 3 BASIC4.01□□□□□ -1.77
POLR1BQ9H9Y6 RNU7-136P-201ENST00000458819 69 ntBASIC4.01□□□□□ -1.77
POLR1BQ9H9Y6 RPS3AP22-201ENST00000488297 769 ntBASIC4.01□□□□□ -1.77
POLR1BQ9H9Y6 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC4.01□□□□□ -1.77
POLR1BQ9H9Y6 AC104685.1-201ENST00000502445 371 ntBASIC4.01□□□□□ -1.77
POLR1BQ9H9Y6 LINC02198-201ENST00000504280 810 ntTSL 3 BASIC4.01□□□□□ -1.77
POLR1BQ9H9Y6 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC4.01□□□□□ -1.77
POLR1BQ9H9Y6 EEF1B2P4-201ENST00000551398 348 ntBASIC4.01□□□□□ -1.77
POLR1BQ9H9Y6 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC4.01□□□□□ -1.77
POLR1BQ9H9Y6 AC007424.1-203ENST00000554613 687 ntBASIC4.01□□□□□ -1.77
POLR1BQ9H9Y6 AC106028.2-201ENST00000555325 464 ntTSL 4 BASIC4.01□□□□□ -1.77
POLR1BQ9H9Y6 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC4.01□□□□□ -1.77
POLR1BQ9H9Y6 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC4.01□□□□□ -1.77
POLR1BQ9H9Y6 AC008751.2-201ENST00000597885 980 ntBASIC4.01□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 104.1 ms