Protein–RNA interactions for Protein: Q9H9C1

VIPAS39, Spermatogenesis-defective protein 39 homolog, humanhuman

Predictions only

Length 493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39Q9H9C1 AC113368.1-201ENST00000603736 382 ntBASIC3.53□□□□□ -1.84
VIPAS39Q9H9C1 THRA1/BTR-203ENST00000604191 571 ntTSL 4 BASIC3.53□□□□□ -1.84
VIPAS39Q9H9C1 AC008083.4-201ENST00000615076 444 ntBASIC3.53□□□□□ -1.84
VIPAS39Q9H9C1 AC069209.1-201ENST00000619282 651 ntBASIC3.53□□□□□ -1.84
VIPAS39Q9H9C1 AC068787.1-201ENST00000623908 691 ntBASIC3.53□□□□□ -1.84
VIPAS39Q9H9C1 LINC01002-236ENST00000634022 378 ntTSL 5 BASIC3.53□□□□□ -1.84
VIPAS39Q9H9C1 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC3.53□□□□□ -1.84
VIPAS39Q9H9C1 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
VIPAS39Q9H9C1 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC3.53□□□□□ -1.85
VIPAS39Q9H9C1 SEPT7P7-201ENST00000420492 1301 ntBASIC3.52□□□□□ -1.85
VIPAS39Q9H9C1 MTCO1P24-201ENST00000515438 1558 ntBASIC3.52□□□□□ -1.85
VIPAS39Q9H9C1 MTND5P3-201ENST00000438536 1800 ntBASIC3.52□□□□□ -1.85
VIPAS39Q9H9C1 SPINT4-201ENST00000279058 512 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
VIPAS39Q9H9C1 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
VIPAS39Q9H9C1 PSG11-201ENST00000306322 990 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
VIPAS39Q9H9C1 NAMPT-202ENST00000354289 1213 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
VIPAS39Q9H9C1 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC3.52□□□□□ -1.85
VIPAS39Q9H9C1 DYNLT3P1-201ENST00000378574 347 ntBASIC3.52□□□□□ -1.85
VIPAS39Q9H9C1 ARF4P3-201ENST00000397387 509 ntBASIC3.52□□□□□ -1.85
VIPAS39Q9H9C1 EIF5P1-201ENST00000400019 1231 ntBASIC3.52□□□□□ -1.85
VIPAS39Q9H9C1 AL590084.1-201ENST00000407885 387 ntBASIC3.52□□□□□ -1.85
VIPAS39Q9H9C1 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC3.52□□□□□ -1.85
VIPAS39Q9H9C1 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC3.52□□□□□ -1.85
VIPAS39Q9H9C1 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC3.52□□□□□ -1.85
VIPAS39Q9H9C1 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
VIPAS39Q9H9C1 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
VIPAS39Q9H9C1 PABPC1P3-201ENST00000469174 459 ntBASIC3.52□□□□□ -1.85
VIPAS39Q9H9C1 AC105137.1-201ENST00000484355 562 ntBASIC3.52□□□□□ -1.85
VIPAS39Q9H9C1 AC069444.1-201ENST00000489428 266 ntTSL 3 BASIC3.52□□□□□ -1.85
VIPAS39Q9H9C1 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC3.52□□□□□ -1.85
VIPAS39Q9H9C1 AC091951.3-201ENST00000504093 246 ntBASIC3.52□□□□□ -1.85
VIPAS39Q9H9C1 AC093767.1-201ENST00000504523 156 ntBASIC3.52□□□□□ -1.85
VIPAS39Q9H9C1 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC3.52□□□□□ -1.85
VIPAS39Q9H9C1 AC093730.1-201ENST00000508825 448 ntTSL 3 BASIC3.52□□□□□ -1.85
VIPAS39Q9H9C1 AC008700.1-201ENST00000512571 654 ntTSL 3 BASIC3.52□□□□□ -1.85
VIPAS39Q9H9C1 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
VIPAS39Q9H9C1 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC3.52□□□□□ -1.85
VIPAS39Q9H9C1 AC015771.1-201ENST00000527283 554 ntTSL 4 BASIC3.52□□□□□ -1.85
VIPAS39Q9H9C1 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC3.52□□□□□ -1.85
VIPAS39Q9H9C1 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC3.52□□□□□ -1.85
VIPAS39Q9H9C1 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC3.52□□□□□ -1.85
VIPAS39Q9H9C1 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC3.52□□□□□ -1.85
VIPAS39Q9H9C1 MIR4277-201ENST00000578298 84 ntBASIC3.52□□□□□ -1.85
VIPAS39Q9H9C1 MIR4506-201ENST00000584693 77 ntBASIC3.52□□□□□ -1.85
VIPAS39Q9H9C1 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC3.52□□□□□ -1.85
VIPAS39Q9H9C1 AL136295.6-201ENST00000610486 658 ntBASIC3.52□□□□□ -1.85
VIPAS39Q9H9C1 AC107075.1-201ENST00000613695 314 ntBASIC3.52□□□□□ -1.85
VIPAS39Q9H9C1 AC231759.1-201ENST00000616455 597 ntBASIC3.52□□□□□ -1.85
VIPAS39Q9H9C1 U73479.1-201ENST00000618062 168 ntBASIC3.52□□□□□ -1.85
VIPAS39Q9H9C1 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC3.52□□□□□ -1.85
VIPAS39Q9H9C1 AC091046.2-201ENST00000620775 665 ntBASIC3.52□□□□□ -1.85
VIPAS39Q9H9C1 ZNF734P-201ENST00000419494 1534 ntBASIC3.52□□□□□ -1.85
VIPAS39Q9H9C1 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
VIPAS39Q9H9C1 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC3.52□□□□□ -1.85
VIPAS39Q9H9C1 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.52□□□□□ -1.85
VIPAS39Q9H9C1 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
VIPAS39Q9H9C1 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC3.51□□□□□ -1.85
VIPAS39Q9H9C1 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC3.51□□□□□ -1.85
VIPAS39Q9H9C1 OFD1P5Y-201ENST00000447585 2590 ntBASIC3.51□□□□□ -1.85
VIPAS39Q9H9C1 Y_RNA.192-201ENST00000363977 102 ntBASIC3.51□□□□□ -1.85
VIPAS39Q9H9C1 RNU6-213P-201ENST00000384051 104 ntBASIC3.51□□□□□ -1.85
VIPAS39Q9H9C1 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
VIPAS39Q9H9C1 AL450338.1-201ENST00000407987 512 ntBASIC3.51□□□□□ -1.85
VIPAS39Q9H9C1 MIR1250-201ENST00000408098 113 ntBASIC3.51□□□□□ -1.85
VIPAS39Q9H9C1 RPL26P29-201ENST00000415623 438 ntBASIC3.51□□□□□ -1.85
VIPAS39Q9H9C1 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
VIPAS39Q9H9C1 RPS27AP12-201ENST00000429552 465 ntBASIC3.51□□□□□ -1.85
VIPAS39Q9H9C1 OR2B8P-201ENST00000432841 938 ntBASIC3.51□□□□□ -1.85
VIPAS39Q9H9C1 AP000855.1-201ENST00000433210 636 ntTSL 2 BASIC3.51□□□□□ -1.85
VIPAS39Q9H9C1 HSD52-202ENST00000436225 772 ntTSL 3 BASIC3.51□□□□□ -1.85
VIPAS39Q9H9C1 HMGN2P21-201ENST00000447764 270 ntBASIC3.51□□□□□ -1.85
VIPAS39Q9H9C1 Z99127.3-201ENST00000448158 395 ntBASIC3.51□□□□□ -1.85
VIPAS39Q9H9C1 SNRPGP3-201ENST00000469405 227 ntBASIC3.51□□□□□ -1.85
VIPAS39Q9H9C1 ST13P14-201ENST00000474095 734 ntBASIC3.51□□□□□ -1.85
VIPAS39Q9H9C1 AC078785.3-201ENST00000476607 425 ntBASIC3.51□□□□□ -1.85
VIPAS39Q9H9C1 TAF8-207ENST00000482432 556 ntTSL 2 BASIC3.51□□□□□ -1.85
VIPAS39Q9H9C1 AC010273.1-201ENST00000504129 946 ntTSL 5 BASIC3.51□□□□□ -1.85
VIPAS39Q9H9C1 AC020699.1-201ENST00000505161 445 ntBASIC3.51□□□□□ -1.85
VIPAS39Q9H9C1 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC3.51□□□□□ -1.85
VIPAS39Q9H9C1 LINC02272-202ENST00000511399 607 ntTSL 2 BASIC3.51□□□□□ -1.85
VIPAS39Q9H9C1 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC3.51□□□□□ -1.85
VIPAS39Q9H9C1 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC3.51□□□□□ -1.85
VIPAS39Q9H9C1 CA1-215ENST00000522389 551 ntTSL 3 BASIC3.51□□□□□ -1.85
VIPAS39Q9H9C1 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
VIPAS39Q9H9C1 MYL12A-202ENST00000536605 899 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
VIPAS39Q9H9C1 AC005832.3-201ENST00000537929 631 ntBASIC3.51□□□□□ -1.85
VIPAS39Q9H9C1 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC3.51□□□□□ -1.85
VIPAS39Q9H9C1 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC3.51□□□□□ -1.85
VIPAS39Q9H9C1 AC055876.1-202ENST00000567053 138 ntBASIC3.51□□□□□ -1.85
VIPAS39Q9H9C1 MYL12A-209ENST00000580887 899 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
VIPAS39Q9H9C1 AC006116.9-201ENST00000591630 649 ntTSL 5 BASIC3.51□□□□□ -1.85
VIPAS39Q9H9C1 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC3.51□□□□□ -1.85
VIPAS39Q9H9C1 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC3.51□□□□□ -1.85
VIPAS39Q9H9C1 BNIP3P26-201ENST00000600827 554 ntBASIC3.51□□□□□ -1.85
VIPAS39Q9H9C1 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC3.51□□□□□ -1.85
VIPAS39Q9H9C1 DUXAP3-201ENST00000603616 594 ntBASIC3.51□□□□□ -1.85
VIPAS39Q9H9C1 AC131235.4-201ENST00000609288 620 ntBASIC3.51□□□□□ -1.85
VIPAS39Q9H9C1 AC009318.4-201ENST00000620496 486 ntBASIC3.51□□□□□ -1.85
VIPAS39Q9H9C1 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC3.51□□□□□ -1.85
VIPAS39Q9H9C1 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 145.7 ms