Protein–RNA interactions for Protein: Q9H4P4

RNF41, E3 ubiquitin-protein ligase NRDP1, humanhuman

Predicted RBP Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF41Q9H4P4 AC244505.3-201ENST00000454598 187 ntBASIC3.64□□□□□ -1.83
RNF41Q9H4P4 AC010890.1-201ENST00000454699 469 ntTSL 4 BASIC3.64□□□□□ -1.83
RNF41Q9H4P4 RPL27AP5-201ENST00000469428 449 ntBASIC3.64□□□□□ -1.83
RNF41Q9H4P4 MTATP6P22-201ENST00000507369 598 ntBASIC3.64□□□□□ -1.83
RNF41Q9H4P4 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC3.64□□□□□ -1.83
RNF41Q9H4P4 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC3.64□□□□□ -1.83
RNF41Q9H4P4 ZKSCAN7P1-201ENST00000543668 673 ntBASIC3.64□□□□□ -1.83
RNF41Q9H4P4 LINC02399-201ENST00000547094 400 ntTSL 2 BASIC3.64□□□□□ -1.83
RNF41Q9H4P4 AC087897.1-201ENST00000550134 156 ntBASIC3.64□□□□□ -1.83
RNF41Q9H4P4 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC3.64□□□□□ -1.83
RNF41Q9H4P4 AC067852.4-201ENST00000590314 478 ntBASIC3.64□□□□□ -1.83
RNF41Q9H4P4 AC006539.2-201ENST00000601729 572 ntBASIC3.64□□□□□ -1.83
RNF41Q9H4P4 AL022067.1-201ENST00000602426 454 ntBASIC3.64□□□□□ -1.83
RNF41Q9H4P4 AL161756.2-201ENST00000604597 246 ntBASIC3.64□□□□□ -1.83
RNF41Q9H4P4 AL392112.1-201ENST00000605115 829 ntBASIC3.64□□□□□ -1.83
RNF41Q9H4P4 AP004247.3-201ENST00000608682 624 ntBASIC3.64□□□□□ -1.83
RNF41Q9H4P4 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.64□□□□□ -1.83
RNF41Q9H4P4 IL21-202ENST00000611104 707 ntAPPRIS ALT2 TSL 1 (best) BASIC3.64□□□□□ -1.83
RNF41Q9H4P4 RNU6-1192P-201ENST00000612197 107 ntBASIC3.64□□□□□ -1.83
RNF41Q9H4P4 RNU6-489P-201ENST00000618289 107 ntBASIC3.64□□□□□ -1.83
RNF41Q9H4P4 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
RNF41Q9H4P4 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
RNF41Q9H4P4 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC3.63□□□□□ -1.83
RNF41Q9H4P4 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC3.63□□□□□ -1.83
RNF41Q9H4P4 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
RNF41Q9H4P4 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
RNF41Q9H4P4 RNU5E-10P-201ENST00000363506 118 ntBASIC3.63□□□□□ -1.83
RNF41Q9H4P4 RNU6-619P-201ENST00000365146 108 ntBASIC3.63□□□□□ -1.83
RNF41Q9H4P4 SNORA51.12-201ENST00000384448 134 ntBASIC3.63□□□□□ -1.83
RNF41Q9H4P4 SNORD67-201ENST00000390833 111 ntBASIC3.63□□□□□ -1.83
RNF41Q9H4P4 AGR3-202ENST00000402239 563 ntTSL 2 BASIC3.63□□□□□ -1.83
RNF41Q9H4P4 PRRC2CP1-201ENST00000404428 159 ntBASIC3.63□□□□□ -1.83
RNF41Q9H4P4 RNU2-21P-201ENST00000410368 188 ntBASIC3.63□□□□□ -1.83
RNF41Q9H4P4 RN7SKP220-201ENST00000410611 288 ntBASIC3.63□□□□□ -1.83
RNF41Q9H4P4 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC3.63□□□□□ -1.83
RNF41Q9H4P4 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC3.63□□□□□ -1.83
RNF41Q9H4P4 TRAPPC2P9-201ENST00000434556 343 ntBASIC3.63□□□□□ -1.83
RNF41Q9H4P4 TXNP1-201ENST00000441872 371 ntBASIC3.63□□□□□ -1.83
RNF41Q9H4P4 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC3.63□□□□□ -1.83
RNF41Q9H4P4 AC024597.1-201ENST00000442753 706 ntTSL 5 BASIC3.63□□□□□ -1.83
RNF41Q9H4P4 HMGB1P48-201ENST00000446155 598 ntBASIC3.63□□□□□ -1.83
RNF41Q9H4P4 AF129075.1-201ENST00000457162 794 ntTSL 3 BASIC3.63□□□□□ -1.83
RNF41Q9H4P4 AP001992.1-205ENST00000462248 379 ntBASIC3.63□□□□□ -1.83
RNF41Q9H4P4 RPL5P24-201ENST00000463742 885 ntBASIC3.63□□□□□ -1.83
RNF41Q9H4P4 RPL23AP14-201ENST00000468281 468 ntBASIC3.63□□□□□ -1.83
RNF41Q9H4P4 XACT-201ENST00000468762 497 ntTSL 5 BASIC3.63□□□□□ -1.83
RNF41Q9H4P4 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC3.63□□□□□ -1.83
RNF41Q9H4P4 TAF8-207ENST00000482432 556 ntTSL 2 BASIC3.63□□□□□ -1.83
RNF41Q9H4P4 PRELID3BP6-201ENST00000503839 571 ntBASIC3.63□□□□□ -1.83
RNF41Q9H4P4 GYPA-204ENST00000504786 357 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
RNF41Q9H4P4 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC3.63□□□□□ -1.83
RNF41Q9H4P4 AC008885.1-201ENST00000514930 301 ntBASIC3.63□□□□□ -1.83
RNF41Q9H4P4 SNORA19.3-201ENST00000516165 130 ntBASIC3.63□□□□□ -1.83
RNF41Q9H4P4 AP002404.1-201ENST00000532005 451 ntBASIC3.63□□□□□ -1.83
RNF41Q9H4P4 AL845331.3-202ENST00000562856 261 ntBASIC3.63□□□□□ -1.83
RNF41Q9H4P4 LINC01539-206ENST00000593282 678 ntTSL 4 BASIC3.63□□□□□ -1.83
RNF41Q9H4P4 AC008687.2-201ENST00000597865 520 ntBASIC3.63□□□□□ -1.83
RNF41Q9H4P4 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC3.63□□□□□ -1.83
RNF41Q9H4P4 AC069431.2-201ENST00000604149 1099 ntBASIC3.63□□□□□ -1.83
RNF41Q9H4P4 AC010608.3-201ENST00000625048 527 ntBASIC3.63□□□□□ -1.83
RNF41Q9H4P4 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.63□□□□□ -1.83
RNF41Q9H4P4 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC3.63□□□□□ -1.83
RNF41Q9H4P4 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC3.63□□□□□ -1.83
RNF41Q9H4P4 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.63□□□□□ -1.83
RNF41Q9H4P4 AC111188.2-201ENST00000529697 1387 ntBASIC3.63□□□□□ -1.83
RNF41Q9H4P4 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
RNF41Q9H4P4 ZNF826P-207ENST00000622273 1910 ntBASIC3.62□□□□□ -1.83
RNF41Q9H4P4 OR1L1-201ENST00000309623 933 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
RNF41Q9H4P4 UBE2Q2P1-202ENST00000354771 883 ntBASIC3.62□□□□□ -1.83
RNF41Q9H4P4 MIR22-201ENST00000362190 85 ntBASIC3.62□□□□□ -1.83
RNF41Q9H4P4 MIR422A-201ENST00000362286 90 ntBASIC3.62□□□□□ -1.83
RNF41Q9H4P4 OR1L1-202ENST00000373686 1083 ntBASIC3.62□□□□□ -1.83
RNF41Q9H4P4 RFX3-203ENST00000381984 364 ntTSL 3 BASIC3.62□□□□□ -1.83
RNF41Q9H4P4 RNU6-1293P-201ENST00000384077 107 ntBASIC3.62□□□□□ -1.83
RNF41Q9H4P4 VN1R51P-201ENST00000411675 945 ntBASIC3.62□□□□□ -1.83
RNF41Q9H4P4 OR51A3P-201ENST00000413596 924 ntBASIC3.62□□□□□ -1.83
RNF41Q9H4P4 PRELID3BP11-201ENST00000414230 479 ntBASIC3.62□□□□□ -1.83
RNF41Q9H4P4 RPS7P9-201ENST00000414704 586 ntBASIC3.62□□□□□ -1.83
RNF41Q9H4P4 SFR1P2-201ENST00000421841 730 ntBASIC3.62□□□□□ -1.83
RNF41Q9H4P4 AC011242.1-201ENST00000433596 1158 ntBASIC3.62□□□□□ -1.83
RNF41Q9H4P4 AC023347.2-201ENST00000433994 462 ntBASIC3.62□□□□□ -1.83
RNF41Q9H4P4 RPL23AP22-201ENST00000437556 453 ntBASIC3.62□□□□□ -1.83
RNF41Q9H4P4 PTGES3P1-201ENST00000439531 483 ntBASIC3.62□□□□□ -1.83
RNF41Q9H4P4 AL592437.1-201ENST00000443781 492 ntBASIC3.62□□□□□ -1.83
RNF41Q9H4P4 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC3.62□□□□□ -1.83
RNF41Q9H4P4 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC3.62□□□□□ -1.83
RNF41Q9H4P4 AC087385.1-201ENST00000475062 312 ntBASIC3.62□□□□□ -1.83
RNF41Q9H4P4 AC068724.1-201ENST00000487100 792 ntBASIC3.62□□□□□ -1.83
RNF41Q9H4P4 AC090071.1-201ENST00000507713 644 ntBASIC3.62□□□□□ -1.83
RNF41Q9H4P4 RNA5SP309-201ENST00000516670 106 ntBASIC3.62□□□□□ -1.83
RNF41Q9H4P4 RN7SKP272-201ENST00000516988 232 ntBASIC3.62□□□□□ -1.83
RNF41Q9H4P4 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC3.62□□□□□ -1.83
RNF41Q9H4P4 AC010376.1-201ENST00000522101 334 ntBASIC3.62□□□□□ -1.83
RNF41Q9H4P4 AC022790.1-201ENST00000522872 204 ntBASIC3.62□□□□□ -1.83
RNF41Q9H4P4 AF279873.1-201ENST00000523393 313 ntBASIC3.62□□□□□ -1.83
RNF41Q9H4P4 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC3.62□□□□□ -1.83
RNF41Q9H4P4 LINC02384-206ENST00000541707 904 ntTSL 3 BASIC3.62□□□□□ -1.83
RNF41Q9H4P4 NIFKP8-201ENST00000560500 874 ntBASIC3.62□□□□□ -1.83
RNF41Q9H4P4 AC037471.2-201ENST00000564941 598 ntBASIC3.62□□□□□ -1.83
RNF41Q9H4P4 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC3.62□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 113.3 ms