Protein–RNA interactions for Protein: Q9BXA9

SALL3, Sal-like protein 3, humanhuman

Predictions only

Length 1,300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SALL3Q9BXA9 CR769775.2-201ENST00000417850 891 ntTSL 3 BASIC4.8□□□□□ -1.64
SALL3Q9BXA9 AC004552.1-201ENST00000419089 348 ntBASIC4.8□□□□□ -1.64
SALL3Q9BXA9 AL159174.1-202ENST00000425588 442 ntTSL 3 BASIC4.8□□□□□ -1.64
SALL3Q9BXA9 AC087857.1-201ENST00000425894 467 ntTSL 3 BASIC4.8□□□□□ -1.64
SALL3Q9BXA9 RPS20P1-201ENST00000434853 354 ntBASIC4.8□□□□□ -1.64
SALL3Q9BXA9 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC4.8□□□□□ -1.64
SALL3Q9BXA9 AP001432.1-201ENST00000440629 520 ntTSL 2 BASIC4.8□□□□□ -1.64
SALL3Q9BXA9 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC4.8□□□□□ -1.64
SALL3Q9BXA9 PAXBP1P1-201ENST00000449315 447 ntBASIC4.8□□□□□ -1.64
SALL3Q9BXA9 RNU6-1218P-201ENST00000458990 108 ntBASIC4.8□□□□□ -1.64
SALL3Q9BXA9 RPS26P3-201ENST00000470205 348 ntBASIC4.8□□□□□ -1.64
SALL3Q9BXA9 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
SALL3Q9BXA9 AC090543.2-201ENST00000483963 348 ntBASIC4.8□□□□□ -1.64
SALL3Q9BXA9 AC004057.1-201ENST00000485827 348 ntBASIC4.8□□□□□ -1.64
SALL3Q9BXA9 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC4.8□□□□□ -1.64
SALL3Q9BXA9 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC4.8□□□□□ -1.64
SALL3Q9BXA9 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC4.8□□□□□ -1.64
SALL3Q9BXA9 AC093281.2-201ENST00000510153 597 ntBASIC4.8□□□□□ -1.64
SALL3Q9BXA9 RN7SKP298-201ENST00000515950 94 ntBASIC4.8□□□□□ -1.64
SALL3Q9BXA9 AC027031.1-201ENST00000517318 489 ntTSL 3 BASIC4.8□□□□□ -1.64
SALL3Q9BXA9 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC4.8□□□□□ -1.64
SALL3Q9BXA9 AC022784.3-202ENST00000517816 826 ntTSL 3 BASIC4.8□□□□□ -1.64
SALL3Q9BXA9 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC4.8□□□□□ -1.64
SALL3Q9BXA9 AP002812.3-201ENST00000527012 551 ntTSL 5 BASIC4.8□□□□□ -1.64
SALL3Q9BXA9 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC4.8□□□□□ -1.64
SALL3Q9BXA9 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC4.8□□□□□ -1.64
SALL3Q9BXA9 MFAP5-212ENST00000543369 972 ntTSL 3 BASIC4.8□□□□□ -1.64
SALL3Q9BXA9 AL355096.1-201ENST00000553561 447 ntTSL 3 BASIC4.8□□□□□ -1.64
SALL3Q9BXA9 GTF2IP8-201ENST00000560687 584 ntBASIC4.8□□□□□ -1.64
SALL3Q9BXA9 AC090877.1-201ENST00000561418 344 ntBASIC4.8□□□□□ -1.64
SALL3Q9BXA9 PCMTD1P2-201ENST00000565017 355 ntBASIC4.8□□□□□ -1.64
SALL3Q9BXA9 MIR4528-201ENST00000577763 90 ntBASIC4.8□□□□□ -1.64
SALL3Q9BXA9 AC090371.2-203ENST00000578782 473 ntTSL 3 BASIC4.8□□□□□ -1.64
SALL3Q9BXA9 BPTFP1-201ENST00000579209 492 ntBASIC4.8□□□□□ -1.64
SALL3Q9BXA9 AC012065.4-201ENST00000602445 679 ntBASIC4.8□□□□□ -1.64
SALL3Q9BXA9 AL159169.3-201ENST00000608871 561 ntBASIC4.8□□□□□ -1.64
SALL3Q9BXA9 AC091304.9-201ENST00000612091 226 ntBASIC4.8□□□□□ -1.64
SALL3Q9BXA9 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
SALL3Q9BXA9 AC034229.5-201ENST00000624258 185 ntBASIC4.8□□□□□ -1.64
SALL3Q9BXA9 AC068724.3-201ENST00000625906 87 ntBASIC4.8□□□□□ -1.64
SALL3Q9BXA9 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
SALL3Q9BXA9 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC4.8□□□□□ -1.64
SALL3Q9BXA9 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC4.8□□□□□ -1.64
SALL3Q9BXA9 TEX21P-201ENST00000447107 1476 ntBASIC4.8□□□□□ -1.64
SALL3Q9BXA9 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
SALL3Q9BXA9 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
SALL3Q9BXA9 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
SALL3Q9BXA9 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC4.8□□□□□ -1.64
SALL3Q9BXA9 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC4.8□□□□□ -1.64
SALL3Q9BXA9 AL079343.1-201ENST00000572358 1771 ntBASIC4.8□□□□□ -1.64
SALL3Q9BXA9 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC4.8□□□□□ -1.64
SALL3Q9BXA9 AP000542.2-201ENST00000623199 6179 ntBASIC4.8□□□□□ -1.64
SALL3Q9BXA9 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
SALL3Q9BXA9 MAPK10-372ENST00000641954 3413 ntBASIC4.79□□□□□ -1.64
SALL3Q9BXA9 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC4.79□□□□□ -1.64
SALL3Q9BXA9 SPATA31D2P-201ENST00000429999 4388 ntBASIC4.79□□□□□ -1.64
SALL3Q9BXA9 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
SALL3Q9BXA9 AC011155.1-201ENST00000316512 456 ntBASIC4.79□□□□□ -1.64
SALL3Q9BXA9 OR2AP1-201ENST00000321688 930 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
SALL3Q9BXA9 RNU6-98P-201ENST00000384173 107 ntBASIC4.79□□□□□ -1.64
SALL3Q9BXA9 Y_RNA.582-201ENST00000391023 95 ntBASIC4.79□□□□□ -1.64
SALL3Q9BXA9 AGR3-202ENST00000402239 563 ntTSL 2 BASIC4.79□□□□□ -1.64
SALL3Q9BXA9 AL391219.1-201ENST00000422570 483 ntBASIC4.79□□□□□ -1.64
SALL3Q9BXA9 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC4.79□□□□□ -1.64
SALL3Q9BXA9 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC4.79□□□□□ -1.64
SALL3Q9BXA9 LINC00484-204ENST00000439438 454 ntTSL 3 BASIC4.79□□□□□ -1.64
SALL3Q9BXA9 AC112653.1-201ENST00000443851 386 ntBASIC4.79□□□□□ -1.64
SALL3Q9BXA9 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC4.79□□□□□ -1.64
SALL3Q9BXA9 YWHAQP9-201ENST00000445891 512 ntBASIC4.79□□□□□ -1.64
SALL3Q9BXA9 UBE2V1P7-201ENST00000446395 340 ntBASIC4.79□□□□□ -1.64
SALL3Q9BXA9 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC4.79□□□□□ -1.64
SALL3Q9BXA9 APOOP2-201ENST00000461561 539 ntBASIC4.79□□□□□ -1.64
SALL3Q9BXA9 RPS4XP15-201ENST00000489210 795 ntBASIC4.79□□□□□ -1.64
SALL3Q9BXA9 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC4.79□□□□□ -1.64
SALL3Q9BXA9 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC4.79□□□□□ -1.64
SALL3Q9BXA9 COMMD10-206ENST00000515539 869 ntTSL 3 BASIC4.79□□□□□ -1.64
SALL3Q9BXA9 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC4.79□□□□□ -1.64
SALL3Q9BXA9 RN7SKP21-201ENST00000516503 220 ntBASIC4.79□□□□□ -1.64
SALL3Q9BXA9 SCARNA14-201ENST00000516903 136 ntBASIC4.79□□□□□ -1.64
SALL3Q9BXA9 AC008802.1-201ENST00000519121 791 ntBASIC4.79□□□□□ -1.64
SALL3Q9BXA9 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC4.79□□□□□ -1.64
SALL3Q9BXA9 ARL1-211ENST00000551828 776 ntTSL 5 BASIC4.79□□□□□ -1.64
SALL3Q9BXA9 POLR2KP1-201ENST00000553226 168 ntBASIC4.79□□□□□ -1.64
SALL3Q9BXA9 AL360157.1-201ENST00000565962 87 ntBASIC4.79□□□□□ -1.64
SALL3Q9BXA9 AC018552.3-201ENST00000567416 561 ntBASIC4.79□□□□□ -1.64
SALL3Q9BXA9 AC090403.1-205ENST00000580883 516 ntTSL 2 BASIC4.79□□□□□ -1.64
SALL3Q9BXA9 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC4.79□□□□□ -1.64
SALL3Q9BXA9 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
SALL3Q9BXA9 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC4.79□□□□□ -1.64
SALL3Q9BXA9 AC020914.6-201ENST00000594327 272 ntBASIC4.79□□□□□ -1.64
SALL3Q9BXA9 AC015871.2-201ENST00000603605 948 ntBASIC4.79□□□□□ -1.64
SALL3Q9BXA9 AL356596.1-201ENST00000624230 379 ntBASIC4.79□□□□□ -1.64
SALL3Q9BXA9 AC015726.3-201ENST00000624501 418 ntBASIC4.79□□□□□ -1.64
SALL3Q9BXA9 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC4.79□□□□□ -1.64
SALL3Q9BXA9 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
SALL3Q9BXA9 AC009229.4-201ENST00000623854 1947 ntBASIC4.79□□□□□ -1.64
SALL3Q9BXA9 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
SALL3Q9BXA9 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
SALL3Q9BXA9 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
SALL3Q9BXA9 MTND5P26-201ENST00000426018 1752 ntBASIC4.78□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 100.3 ms