Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 RNU6-914P-201ENST00000516749 109 ntBASIC5.98□□□□□ -1.45
USB1Q9BQ65 IGKV2-19-201ENST00000518132 283 ntBASIC5.98□□□□□ -1.45
USB1Q9BQ65 AC010186.2-204ENST00000537668 439 ntBASIC5.98□□□□□ -1.45
USB1Q9BQ65 AC007458.1-201ENST00000542812 373 ntBASIC5.98□□□□□ -1.45
USB1Q9BQ65 AL049836.2-201ENST00000553318 513 ntTSL 5 BASIC5.98□□□□□ -1.45
USB1Q9BQ65 AL358913.1-201ENST00000554342 121 ntBASIC5.98□□□□□ -1.45
USB1Q9BQ65 AL359219.2-201ENST00000555184 348 ntBASIC5.98□□□□□ -1.45
USB1Q9BQ65 LINC02284-202ENST00000560924 566 ntTSL 4 BASIC5.98□□□□□ -1.45
USB1Q9BQ65 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC5.98□□□□□ -1.45
USB1Q9BQ65 AL590032.1-201ENST00000604920 252 ntBASIC5.98□□□□□ -1.45
USB1Q9BQ65 AC072026.1-201ENST00000605023 201 ntBASIC5.98□□□□□ -1.45
USB1Q9BQ65 AC073657.2-201ENST00000605661 303 ntBASIC5.98□□□□□ -1.45
USB1Q9BQ65 AC244517.6-202ENST00000623884 566 ntAPPRIS P1 TSL 4 BASIC5.98□□□□□ -1.45
USB1Q9BQ65 TPRG1-204ENST00000433971 2296 ntAPPRIS P1 TSL 2 BASIC5.98□□□□□ -1.45
USB1Q9BQ65 TANC2-202ENST00000424789 11721 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
USB1Q9BQ65 DTNA-228ENST00000597674 1732 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
USB1Q9BQ65 C16orf87-202ENST00000394806 6640 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
USB1Q9BQ65 STK31-205ENST00000433467 3085 ntTSL 2 BASIC5.98□□□□□ -1.45
USB1Q9BQ65 ZNF254-206ENST00000611359 3982 ntTSL 3 BASIC5.98□□□□□ -1.45
USB1Q9BQ65 CPED1-201ENST00000310396 5340 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
USB1Q9BQ65 SMG1P5-202ENST00000529428 4219 ntBASIC5.98□□□□□ -1.45
USB1Q9BQ65 SMG1P2-201ENST00000566127 4221 ntBASIC5.98□□□□□ -1.45
USB1Q9BQ65 LINC01876-209ENST00000638047 1983 ntTSL 5 BASIC5.98□□□□□ -1.45
USB1Q9BQ65 TGFBR3-202ENST00000370399 4550 ntAPPRIS ALT1 TSL 1 (best) BASIC5.98□□□□□ -1.45
USB1Q9BQ65 RTN4-203ENST00000357376 4110 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
USB1Q9BQ65 GHR-211ENST00000618088 4491 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
USB1Q9BQ65 CEP85L-204ENST00000392500 1872 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
USB1Q9BQ65 RAPH1-207ENST00000423104 1860 ntAPPRIS ALT2 TSL 5 BASIC5.98□□□□□ -1.45
USB1Q9BQ65 PDE8B-208ENST00000505283 3474 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
USB1Q9BQ65 LYVE1-201ENST00000256178 3273 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
USB1Q9BQ65 BUB1-202ENST00000409311 3287 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
USB1Q9BQ65 MARCH7-201ENST00000259050 5922 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
USB1Q9BQ65 HMGCS2-204ENST00000544913 1925 ntTSL 2 BASIC5.97□□□□□ -1.45
USB1Q9BQ65 NCOR1-205ENST00000395857 9501 ntTSL 5 BASIC5.97□□□□□ -1.45
USB1Q9BQ65 TTC3-201ENST00000354749 9084 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
USB1Q9BQ65 PSMC6-201ENST00000445930 2188 ntAPPRIS P2 TSL 1 (best) BASIC5.97□□□□□ -1.45
USB1Q9BQ65 AC025809.2-201ENST00000625085 1802 ntBASIC5.97□□□□□ -1.45
USB1Q9BQ65 LINC02197-201ENST00000502659 2767 ntTSL 2 BASIC5.97□□□□□ -1.45
USB1Q9BQ65 PHC3-214ENST00000494943 5030 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
USB1Q9BQ65 ALB-209ENST00000503124 1741 ntTSL 5 BASIC5.97□□□□□ -1.45
USB1Q9BQ65 AC020743.2-201ENST00000639870 1370 ntTSL 5 BASIC5.97□□□□□ -1.45
USB1Q9BQ65 LRRC37B-201ENST00000327564 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC5.97□□□□□ -1.45
USB1Q9BQ65 AL391684.1-202ENST00000641293 1636 ntBASIC5.97□□□□□ -1.45
USB1Q9BQ65 BCL2L14-213ENST00000589718 1850 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
USB1Q9BQ65 DICER1-202ENST00000393063 10220 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
USB1Q9BQ65 NBPF26-202ENST00000611287 2701 ntTSL 5 BASIC5.97□□□□□ -1.45
USB1Q9BQ65 NBPF12-204ENST00000613714 2701 ntTSL 5 BASIC5.97□□□□□ -1.45
USB1Q9BQ65 TMEM31-201ENST00000319560 728 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
USB1Q9BQ65 RNU6-1020P-201ENST00000363684 107 ntBASIC5.97□□□□□ -1.45
USB1Q9BQ65 MT-TC-201ENST00000387405 66 ntBASIC5.97□□□□□ -1.45
USB1Q9BQ65 TRBV6-7-201ENST00000390373 344 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
USB1Q9BQ65 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
USB1Q9BQ65 CYB5AP4-201ENST00000396692 399 ntBASIC5.97□□□□□ -1.45
USB1Q9BQ65 AC013442.1-201ENST00000397347 228 ntBASIC5.97□□□□□ -1.45
USB1Q9BQ65 CYCSP17-201ENST00000407870 315 ntBASIC5.97□□□□□ -1.45
USB1Q9BQ65 Y_RNA.626-201ENST00000411288 95 ntBASIC5.97□□□□□ -1.45
USB1Q9BQ65 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC5.97□□□□□ -1.45
USB1Q9BQ65 CYP4F30P-202ENST00000420048 405 ntBASIC5.97□□□□□ -1.45
USB1Q9BQ65 TMEM167AP1-201ENST00000423409 219 ntBASIC5.97□□□□□ -1.45
USB1Q9BQ65 AL591043.1-201ENST00000432461 424 ntBASIC5.97□□□□□ -1.45
USB1Q9BQ65 AC007389.2-201ENST00000434630 306 ntBASIC5.97□□□□□ -1.45
USB1Q9BQ65 AC004938.1-201ENST00000438468 308 ntBASIC5.97□□□□□ -1.45
USB1Q9BQ65 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC5.97□□□□□ -1.45
USB1Q9BQ65 AC091021.1-201ENST00000468051 388 ntBASIC5.97□□□□□ -1.45
USB1Q9BQ65 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC5.97□□□□□ -1.45
USB1Q9BQ65 RN7SL143P-201ENST00000496780 297 ntBASIC5.97□□□□□ -1.45
USB1Q9BQ65 RPS27AP13-201ENST00000498403 237 ntBASIC5.97□□□□□ -1.45
USB1Q9BQ65 Y_RNA.662-201ENST00000516028 97 ntBASIC5.97□□□□□ -1.45
USB1Q9BQ65 RN7SKP147-201ENST00000517154 244 ntBASIC5.97□□□□□ -1.45
USB1Q9BQ65 AC006065.4-203ENST00000541065 526 ntTSL 2 BASIC5.97□□□□□ -1.45
USB1Q9BQ65 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC5.97□□□□□ -1.45
USB1Q9BQ65 AL133371.1-201ENST00000555481 764 ntTSL 2 BASIC5.97□□□□□ -1.45
USB1Q9BQ65 OR4H12P-201ENST00000556269 907 ntBASIC5.97□□□□□ -1.45
USB1Q9BQ65 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC5.97□□□□□ -1.45
USB1Q9BQ65 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC5.97□□□□□ -1.45
USB1Q9BQ65 AC040963.1-201ENST00000591900 564 ntTSL 4 BASIC5.97□□□□□ -1.45
USB1Q9BQ65 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC5.97□□□□□ -1.45
USB1Q9BQ65 AC123786.2-201ENST00000603459 275 ntBASIC5.97□□□□□ -1.45
USB1Q9BQ65 AC098826.3-201ENST00000603823 466 ntBASIC5.97□□□□□ -1.45
USB1Q9BQ65 Y_RNA.772-201ENST00000606692 102 ntBASIC5.97□□□□□ -1.45
USB1Q9BQ65 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC5.97□□□□□ -1.45
USB1Q9BQ65 AC211486.4-201ENST00000621495 113 ntBASIC5.97□□□□□ -1.45
USB1Q9BQ65 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC5.97□□□□□ -1.45
USB1Q9BQ65 AL596275.2-204ENST00000641628 552 ntBASIC5.97□□□□□ -1.45
USB1Q9BQ65 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
USB1Q9BQ65 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC5.97□□□□□ -1.45
USB1Q9BQ65 LINC00326-202ENST00000457339 2515 ntTSL 5 BASIC5.97□□□□□ -1.45
USB1Q9BQ65 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC5.97□□□□□ -1.45
USB1Q9BQ65 THRB-203ENST00000396671 7506 ntAPPRIS P2 TSL 5 BASIC5.97□□□□□ -1.45
USB1Q9BQ65 ZSCAN12-202ENST00000396827 3909 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
USB1Q9BQ65 ARHGAP29-201ENST00000260526 6087 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
USB1Q9BQ65 ARHGAP5-210ENST00000556611 4824 ntAPPRIS ALT1 TSL 5 BASIC5.97□□□□□ -1.45
USB1Q9BQ65 AC092070.2-203ENST00000598377 3644 ntBASIC5.97□□□□□ -1.45
USB1Q9BQ65 FBXO43-201ENST00000428847 2886 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.45
USB1Q9BQ65 WDR35-201ENST00000281405 6918 ntAPPRIS P3 TSL 1 (best) BASIC5.96□□□□□ -1.45
USB1Q9BQ65 AC245407.1-201ENST00000621489 2538 ntTSL 2 BASIC5.96□□□□□ -1.45
USB1Q9BQ65 CAPN6-201ENST00000324068 3568 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.45
USB1Q9BQ65 AL355306.2-202ENST00000634380 2281 ntTSL 5 BASIC5.96□□□□□ -1.45
USB1Q9BQ65 SH3D19-201ENST00000304527 5273 ntAPPRIS P3 TSL 2 BASIC5.96□□□□□ -1.45
USB1Q9BQ65 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC5.96□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 75.2 ms