Protein–RNA interactions for Protein: Q99742

NPAS1, Neuronal PAS domain-containing protein 1, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS1Q99742 Y_RNA.234-201ENST00000364409 97 ntBASIC4.06□□□□□ -1.76
NPAS1Q99742 Y_RNA.517-201ENST00000384551 106 ntBASIC4.06□□□□□ -1.76
NPAS1Q99742 OR6C69P-201ENST00000394268 893 ntBASIC4.06□□□□□ -1.76
NPAS1Q99742 HMGN1P14-201ENST00000412459 517 ntBASIC4.06□□□□□ -1.76
NPAS1Q99742 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
NPAS1Q99742 TMSB10P2-201ENST00000416049 131 ntBASIC4.06□□□□□ -1.76
NPAS1Q99742 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
NPAS1Q99742 UBE2V1P13-201ENST00000436983 439 ntBASIC4.06□□□□□ -1.76
NPAS1Q99742 SDCBP-205ENST00000447267 772 ntTSL 3 BASIC4.06□□□□□ -1.76
NPAS1Q99742 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC4.06□□□□□ -1.76
NPAS1Q99742 NDUFS5P3-201ENST00000450668 321 ntBASIC4.06□□□□□ -1.76
NPAS1Q99742 RPS27AP17-201ENST00000463344 455 ntBASIC4.06□□□□□ -1.76
NPAS1Q99742 AC013356.1-201ENST00000489027 564 ntBASIC4.06□□□□□ -1.76
NPAS1Q99742 LAMTOR3P2-201ENST00000504479 232 ntBASIC4.06□□□□□ -1.76
NPAS1Q99742 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC4.06□□□□□ -1.76
NPAS1Q99742 AC105914.2-201ENST00000507525 233 ntTSL 3 BASIC4.06□□□□□ -1.76
NPAS1Q99742 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC4.06□□□□□ -1.76
NPAS1Q99742 PAICSP4-201ENST00000517543 1253 ntBASIC4.06□□□□□ -1.76
NPAS1Q99742 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC4.06□□□□□ -1.76
NPAS1Q99742 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC4.06□□□□□ -1.76
NPAS1Q99742 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC4.06□□□□□ -1.76
NPAS1Q99742 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC4.06□□□□□ -1.76
NPAS1Q99742 DNAL1-206ENST00000554871 632 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
NPAS1Q99742 ZNF519P3-201ENST00000557158 1032 ntBASIC4.06□□□□□ -1.76
NPAS1Q99742 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC4.06□□□□□ -1.76
NPAS1Q99742 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC4.06□□□□□ -1.76
NPAS1Q99742 AC091178.1-203ENST00000584586 279 ntBASIC4.06□□□□□ -1.76
NPAS1Q99742 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC4.06□□□□□ -1.76
NPAS1Q99742 AC068790.6-201ENST00000602558 258 ntBASIC4.06□□□□□ -1.76
NPAS1Q99742 AC112191.3-201ENST00000604371 277 ntBASIC4.06□□□□□ -1.76
NPAS1Q99742 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC4.06□□□□□ -1.76
NPAS1Q99742 IGHV3-29-201ENST00000604817 344 ntBASIC4.06□□□□□ -1.76
NPAS1Q99742 AL160290.3-201ENST00000604869 165 ntBASIC4.06□□□□□ -1.76
NPAS1Q99742 AC004853.1-201ENST00000604902 698 ntBASIC4.06□□□□□ -1.76
NPAS1Q99742 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
NPAS1Q99742 BCRP9-201ENST00000605312 388 ntBASIC4.06□□□□□ -1.76
NPAS1Q99742 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC4.06□□□□□ -1.76
NPAS1Q99742 AC006566.1-201ENST00000608943 513 ntBASIC4.06□□□□□ -1.76
NPAS1Q99742 AC012409.3-201ENST00000611343 981 ntBASIC4.06□□□□□ -1.76
NPAS1Q99742 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC4.06□□□□□ -1.76
NPAS1Q99742 AL590099.1-201ENST00000615276 138 ntBASIC4.06□□□□□ -1.76
NPAS1Q99742 AC006065.6-201ENST00000625201 545 ntBASIC4.06□□□□□ -1.76
NPAS1Q99742 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
NPAS1Q99742 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC4.06□□□□□ -1.76
NPAS1Q99742 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC4.06□□□□□ -1.76
NPAS1Q99742 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC4.06□□□□□ -1.76
NPAS1Q99742 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC4.06□□□□□ -1.76
NPAS1Q99742 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
NPAS1Q99742 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC4.06□□□□□ -1.76
NPAS1Q99742 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC4.06□□□□□ -1.76
NPAS1Q99742 CCT4P2-201ENST00000233836 1548 ntBASIC4.05□□□□□ -1.76
NPAS1Q99742 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
NPAS1Q99742 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
NPAS1Q99742 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
NPAS1Q99742 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC4.05□□□□□ -1.76
NPAS1Q99742 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
NPAS1Q99742 OR51F2-201ENST00000322110 993 ntAPPRIS ALT2 BASIC4.05□□□□□ -1.76
NPAS1Q99742 RNU1-32P-201ENST00000363937 159 ntBASIC4.05□□□□□ -1.76
NPAS1Q99742 SNORD74.4-201ENST00000364129 80 ntBASIC4.05□□□□□ -1.76
NPAS1Q99742 RNU6-1119P-201ENST00000384349 108 ntBASIC4.05□□□□□ -1.76
NPAS1Q99742 AC136624.1-201ENST00000400791 413 ntBASIC4.05□□□□□ -1.76
NPAS1Q99742 MIR921-201ENST00000401133 56 ntBASIC4.05□□□□□ -1.76
NPAS1Q99742 RNA5SP56-201ENST00000410277 118 ntBASIC4.05□□□□□ -1.76
NPAS1Q99742 AL359704.1-201ENST00000411586 781 ntBASIC4.05□□□□□ -1.76
NPAS1Q99742 AIMP1P1-201ENST00000418670 937 ntBASIC4.05□□□□□ -1.76
NPAS1Q99742 B3GALNT1P1-201ENST00000420569 975 ntBASIC4.05□□□□□ -1.76
NPAS1Q99742 RWDD4P2-201ENST00000426392 563 ntBASIC4.05□□□□□ -1.76
NPAS1Q99742 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC4.05□□□□□ -1.76
NPAS1Q99742 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC4.05□□□□□ -1.76
NPAS1Q99742 RPEP2-201ENST00000432149 701 ntBASIC4.05□□□□□ -1.76
NPAS1Q99742 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC4.05□□□□□ -1.76
NPAS1Q99742 ATP5C1P1-201ENST00000441945 895 ntBASIC4.05□□□□□ -1.76
NPAS1Q99742 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC4.05□□□□□ -1.76
NPAS1Q99742 AL592447.1-201ENST00000447592 540 ntBASIC4.05□□□□□ -1.76
NPAS1Q99742 AC012671.1-201ENST00000451912 203 ntBASIC4.05□□□□□ -1.76
NPAS1Q99742 AC098824.1-201ENST00000453565 980 ntBASIC4.05□□□□□ -1.76
NPAS1Q99742 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
NPAS1Q99742 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
NPAS1Q99742 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
NPAS1Q99742 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC4.05□□□□□ -1.76
NPAS1Q99742 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC4.05□□□□□ -1.76
NPAS1Q99742 NDUFB4P2-201ENST00000509515 391 ntBASIC4.05□□□□□ -1.76
NPAS1Q99742 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC4.05□□□□□ -1.76
NPAS1Q99742 AC108064.1-201ENST00000513791 460 ntBASIC4.05□□□□□ -1.76
NPAS1Q99742 IGLVIV-65-201ENST00000517313 360 ntBASIC4.05□□□□□ -1.76
NPAS1Q99742 AC008694.2-201ENST00000517591 306 ntBASIC4.05□□□□□ -1.76
NPAS1Q99742 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC4.05□□□□□ -1.76
NPAS1Q99742 MTCYBP20-201ENST00000524239 1129 ntBASIC4.05□□□□□ -1.76
NPAS1Q99742 DEFB109D-201ENST00000529497 240 ntBASIC4.05□□□□□ -1.76
NPAS1Q99742 AP002963.1-201ENST00000530590 184 ntBASIC4.05□□□□□ -1.76
NPAS1Q99742 AC022878.1-201ENST00000530684 149 ntBASIC4.05□□□□□ -1.76
NPAS1Q99742 EEF1B2P4-201ENST00000551398 348 ntBASIC4.05□□□□□ -1.76
NPAS1Q99742 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC4.05□□□□□ -1.76
NPAS1Q99742 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC4.05□□□□□ -1.76
NPAS1Q99742 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC4.05□□□□□ -1.76
NPAS1Q99742 AC087683.1-201ENST00000591187 441 ntBASIC4.05□□□□□ -1.76
NPAS1Q99742 AL359999.1-201ENST00000604513 294 ntBASIC4.05□□□□□ -1.76
NPAS1Q99742 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC4.05□□□□□ -1.76
NPAS1Q99742 OR2M2-202ENST00000641211 1229 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
NPAS1Q99742 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC4.05□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 100.4 ms