Protein–RNA interactions for Protein: Q99715

COL12A1, Collagen alpha-1(XII) chain, humanhuman

Predictions only

Length 3,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1Q99715 AL445646.1-201ENST00000431784 216 ntBASIC2.09□□□□□ -2.08
COL12A1Q99715 LINC01378-202ENST00000437514 783 ntTSL 3 BASIC2.09□□□□□ -2.08
COL12A1Q99715 RPS3AP4-201ENST00000555161 764 ntBASIC2.09□□□□□ -2.08
COL12A1Q99715 SUB1P3-201ENST00000564581 315 ntBASIC2.09□□□□□ -2.08
COL12A1Q99715 AP001542.2-201ENST00000593141 364 ntBASIC2.09□□□□□ -2.08
COL12A1Q99715 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC2.09□□□□□ -2.08
COL12A1Q99715 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC2.09□□□□□ -2.08
COL12A1Q99715 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
COL12A1Q99715 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.08□□□□□ -2.08
COL12A1Q99715 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC2.08□□□□□ -2.08
COL12A1Q99715 RN7SKP140-201ENST00000411196 284 ntBASIC2.08□□□□□ -2.08
COL12A1Q99715 PANCR-202ENST00000513690 448 ntTSL 2 BASIC2.08□□□□□ -2.08
COL12A1Q99715 REXO2-218ENST00000544827 880 ntTSL 3 BASIC2.08□□□□□ -2.08
COL12A1Q99715 AC126177.3-201ENST00000551839 688 ntBASIC2.08□□□□□ -2.08
COL12A1Q99715 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
COL12A1Q99715 Z73965.1-201ENST00000623412 2297 ntBASIC2.08□□□□□ -2.08
COL12A1Q99715 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
COL12A1Q99715 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.08□□□□□ -2.08
COL12A1Q99715 MTND5P19-201ENST00000424872 1794 ntBASIC2.08□□□□□ -2.08
COL12A1Q99715 Y_RNA.178-201ENST00000363832 102 ntBASIC2.08□□□□□ -2.08
COL12A1Q99715 RNU6-457P-201ENST00000363999 107 ntBASIC2.08□□□□□ -2.08
COL12A1Q99715 OR51F1-201ENST00000380383 960 ntAPPRIS P5 BASIC2.08□□□□□ -2.08
COL12A1Q99715 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
COL12A1Q99715 AL591416.1-201ENST00000404015 867 ntBASIC2.08□□□□□ -2.08
COL12A1Q99715 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC2.08□□□□□ -2.08
COL12A1Q99715 AC093422.2-201ENST00000452599 686 ntTSL 2 BASIC2.08□□□□□ -2.08
COL12A1Q99715 SNORA64.4-201ENST00000516632 81 ntBASIC2.08□□□□□ -2.08
COL12A1Q99715 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC2.08□□□□□ -2.08
COL12A1Q99715 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC2.08□□□□□ -2.08
COL12A1Q99715 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC2.08□□□□□ -2.08
COL12A1Q99715 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
COL12A1Q99715 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
COL12A1Q99715 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC2.07□□□□□ -2.08
COL12A1Q99715 ZFAND6-223ENST00000616533 1653 ntAPPRIS P1 TSL 5 BASIC2.07□□□□□ -2.08
COL12A1Q99715 MRRF-203ENST00000373723 1176 ntTSL 3 BASIC2.07□□□□□ -2.08
COL12A1Q99715 HMGB1P10-201ENST00000395823 563 ntBASIC2.07□□□□□ -2.08
COL12A1Q99715 RNU2-2P-201ENST00000410396 191 ntBASIC2.07□□□□□ -2.08
COL12A1Q99715 AL355306.2-209ENST00000437803 357 ntTSL 2 BASIC2.07□□□□□ -2.08
COL12A1Q99715 MIR2114-201ENST00000516645 80 ntBASIC2.07□□□□□ -2.08
COL12A1Q99715 OR8L1P-201ENST00000534005 955 ntBASIC2.07□□□□□ -2.08
COL12A1Q99715 U2.15-201ENST00000611544 191 ntBASIC2.07□□□□□ -2.08
COL12A1Q99715 U2.16-201ENST00000613119 191 ntBASIC2.07□□□□□ -2.08
COL12A1Q99715 U2.12-201ENST00000613778 191 ntBASIC2.07□□□□□ -2.08
COL12A1Q99715 U2.20-201ENST00000613956 192 ntBASIC2.07□□□□□ -2.08
COL12A1Q99715 U2.9-201ENST00000615427 191 ntBASIC2.07□□□□□ -2.08
COL12A1Q99715 U2.11-201ENST00000616345 191 ntBASIC2.07□□□□□ -2.08
COL12A1Q99715 U2.2-201ENST00000616535 191 ntBASIC2.07□□□□□ -2.08
COL12A1Q99715 U2.3-201ENST00000617785 191 ntBASIC2.07□□□□□ -2.08
COL12A1Q99715 U2.19-201ENST00000618602 191 ntBASIC2.07□□□□□ -2.08
COL12A1Q99715 RNU2-1-201ENST00000618664 191 ntBASIC2.07□□□□□ -2.08
COL12A1Q99715 U2.6-201ENST00000619225 191 ntBASIC2.07□□□□□ -2.08
COL12A1Q99715 U2.5-201ENST00000619465 191 ntBASIC2.07□□□□□ -2.08
COL12A1Q99715 U2.10-201ENST00000620268 191 ntBASIC2.07□□□□□ -2.08
COL12A1Q99715 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC2.07□□□□□ -2.08
COL12A1Q99715 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
COL12A1Q99715 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
COL12A1Q99715 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC2.07□□□□□ -2.08
COL12A1Q99715 RNU6-707P-201ENST00000364647 95 ntBASIC2.07□□□□□ -2.08
COL12A1Q99715 OR5K3-201ENST00000383695 966 ntAPPRIS P1 BASIC2.07□□□□□ -2.08
COL12A1Q99715 AC104389.3-201ENST00000445629 235 ntBASIC2.07□□□□□ -2.08
COL12A1Q99715 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC2.07□□□□□ -2.08
COL12A1Q99715 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC2.07□□□□□ -2.08
COL12A1Q99715 RAC1P5-201ENST00000512182 576 ntBASIC2.07□□□□□ -2.08
COL12A1Q99715 AC245166.1-201ENST00000521012 253 ntBASIC2.07□□□□□ -2.08
COL12A1Q99715 SNRPGP18-201ENST00000553000 214 ntBASIC2.07□□□□□ -2.08
COL12A1Q99715 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC2.07□□□□□ -2.08
COL12A1Q99715 AL049840.6-202ENST00000603373 279 ntBASIC2.07□□□□□ -2.08
COL12A1Q99715 AL591516.1-201ENST00000611326 274 ntBASIC2.07□□□□□ -2.08
COL12A1Q99715 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC2.07□□□□□ -2.08
COL12A1Q99715 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC2.07□□□□□ -2.08
COL12A1Q99715 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
COL12A1Q99715 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
COL12A1Q99715 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC2.07□□□□□ -2.08
COL12A1Q99715 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC2.07□□□□□ -2.08
COL12A1Q99715 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC2.07□□□□□ -2.08
COL12A1Q99715 RPL7P54-201ENST00000438336 674 ntBASIC2.06□□□□□ -2.08
COL12A1Q99715 AL450263.2-201ENST00000439400 589 ntBASIC2.06□□□□□ -2.08
COL12A1Q99715 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC2.06□□□□□ -2.08
COL12A1Q99715 AP004372.1-201ENST00000604842 844 ntBASIC2.06□□□□□ -2.08
COL12A1Q99715 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC2.06□□□□□ -2.08
COL12A1Q99715 ATP13A5-205ENST00000620313 709 ntTSL 5 BASIC2.06□□□□□ -2.08
COL12A1Q99715 AC095038.3-201ENST00000634439 195 ntBASIC2.06□□□□□ -2.08
COL12A1Q99715 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
COL12A1Q99715 KLRC2-201ENST00000381901 1211 ntAPPRIS ALT2 TSL 5 BASIC2.06□□□□□ -2.08
COL12A1Q99715 LUZP4P1-201ENST00000415420 344 ntBASIC2.06□□□□□ -2.08
COL12A1Q99715 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC2.06□□□□□ -2.08
COL12A1Q99715 FGF7P3-201ENST00000454645 303 ntBASIC2.06□□□□□ -2.08
COL12A1Q99715 AC105918.1-201ENST00000474399 838 ntBASIC2.06□□□□□ -2.08
COL12A1Q99715 KLRC2-206ENST00000619500 883 ntTSL 5 BASIC2.06□□□□□ -2.08
COL12A1Q99715 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC2.06□□□□□ -2.08
COL12A1Q99715 AC025125.1-201ENST00000624743 1922 ntBASIC2.06□□□□□ -2.08
COL12A1Q99715 AC093831.2-201ENST00000624393 3427 ntBASIC2.06□□□□□ -2.08
COL12A1Q99715 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
COL12A1Q99715 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC2.06□□□□□ -2.08
COL12A1Q99715 RPL9P7-201ENST00000330965 580 ntBASIC2.06□□□□□ -2.08
COL12A1Q99715 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC2.06□□□□□ -2.08
COL12A1Q99715 AC002378.1-201ENST00000432360 298 ntTSL 3 BASIC2.06□□□□□ -2.08
COL12A1Q99715 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC2.06□□□□□ -2.08
COL12A1Q99715 SPATA2P1-201ENST00000431223 2055 ntBASIC2.06□□□□□ -2.08
COL12A1Q99715 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC2.06□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 95.6 ms