Protein–RNA interactions for Protein: Q99626

CDX2, Homeobox protein CDX-2, humanhuman

Predicted RBP Predictions only

Length 313 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX2Q99626 BNIP3P8-201ENST00000597863 560 ntBASIC3.11□□□□□ -1.91
CDX2Q99626 SUMO2P14-201ENST00000604488 293 ntBASIC3.11□□□□□ -1.91
CDX2Q99626 AP003117.2-201ENST00000606010 545 ntBASIC3.11□□□□□ -1.91
CDX2Q99626 AC003001.2-201ENST00000616294 831 ntBASIC3.11□□□□□ -1.91
CDX2Q99626 AL356490.1-201ENST00000623079 479 ntBASIC3.11□□□□□ -1.91
CDX2Q99626 AC090617.9-201ENST00000623751 147 ntBASIC3.11□□□□□ -1.91
CDX2Q99626 AL512643.1-201ENST00000635735 524 ntBASIC3.11□□□□□ -1.91
CDX2Q99626 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC3.11□□□□□ -1.91
CDX2Q99626 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
CDX2Q99626 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.11□□□□□ -1.91
CDX2Q99626 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.11□□□□□ -1.91
CDX2Q99626 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
CDX2Q99626 AC009501.3-201ENST00000605001 1352 ntBASIC3.11□□□□□ -1.91
CDX2Q99626 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC3.11□□□□□ -1.91
CDX2Q99626 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
CDX2Q99626 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
CDX2Q99626 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.1□□□□□ -1.91
CDX2Q99626 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
CDX2Q99626 NME5-201ENST00000265191 1198 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
CDX2Q99626 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC3.1□□□□□ -1.91
CDX2Q99626 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC3.1□□□□□ -1.91
CDX2Q99626 MIR592-201ENST00000384959 97 ntBASIC3.1□□□□□ -1.91
CDX2Q99626 Z98941.1-201ENST00000407764 100 ntBASIC3.1□□□□□ -1.91
CDX2Q99626 Z98742.3-201ENST00000418637 326 ntBASIC3.1□□□□□ -1.91
CDX2Q99626 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC3.1□□□□□ -1.91
CDX2Q99626 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC3.1□□□□□ -1.91
CDX2Q99626 TRIM60P3Y-201ENST00000432201 673 ntBASIC3.1□□□□□ -1.91
CDX2Q99626 ZFAND6P1-201ENST00000434138 605 ntBASIC3.1□□□□□ -1.91
CDX2Q99626 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC3.1□□□□□ -1.91
CDX2Q99626 AL031663.1-201ENST00000437445 219 ntBASIC3.1□□□□□ -1.91
CDX2Q99626 RPL37P4-201ENST00000448908 268 ntBASIC3.1□□□□□ -1.91
CDX2Q99626 MRPS31P2-201ENST00000451581 518 ntBASIC3.1□□□□□ -1.91
CDX2Q99626 MTCO3P20-201ENST00000454926 688 ntBASIC3.1□□□□□ -1.91
CDX2Q99626 RPL30P11-201ENST00000495304 339 ntBASIC3.1□□□□□ -1.91
CDX2Q99626 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC3.1□□□□□ -1.91
CDX2Q99626 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
CDX2Q99626 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC3.1□□□□□ -1.91
CDX2Q99626 AC117834.1-202ENST00000521203 561 ntTSL 4 BASIC3.1□□□□□ -1.91
CDX2Q99626 AC023202.1-201ENST00000521681 491 ntTSL 3 BASIC3.1□□□□□ -1.91
CDX2Q99626 OR5G4P-201ENST00000525251 760 ntBASIC3.1□□□□□ -1.91
CDX2Q99626 AP003122.3-201ENST00000526316 255 ntBASIC3.1□□□□□ -1.91
CDX2Q99626 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC3.1□□□□□ -1.91
CDX2Q99626 CKS1BP1-201ENST00000555221 240 ntBASIC3.1□□□□□ -1.91
CDX2Q99626 ZNF192P1-203ENST00000565888 810 ntBASIC3.1□□□□□ -1.91
CDX2Q99626 AC099489.2-201ENST00000574976 260 ntBASIC3.1□□□□□ -1.91
CDX2Q99626 NF1P5-201ENST00000588287 448 ntBASIC3.1□□□□□ -1.91
CDX2Q99626 ZRANB2-AS2-212ENST00000590186 686 ntTSL 5 BASIC3.1□□□□□ -1.91
CDX2Q99626 AC135178.6-201ENST00000605314 398 ntBASIC3.1□□□□□ -1.91
CDX2Q99626 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC3.1□□□□□ -1.91
CDX2Q99626 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC3.1□□□□□ -1.91
CDX2Q99626 AC134980.1-211ENST00000638243 1094 ntTSL 2 BASIC3.1□□□□□ -1.91
CDX2Q99626 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
CDX2Q99626 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
CDX2Q99626 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC3.1□□□□□ -1.91
CDX2Q99626 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
CDX2Q99626 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC3.1□□□□□ -1.91
CDX2Q99626 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC3.1□□□□□ -1.91
CDX2Q99626 TTC41P-203ENST00000548527 1475 ntTSL 5 BASIC3.09□□□□□ -1.91
CDX2Q99626 CENPK-201ENST00000242872 1576 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
CDX2Q99626 CR381670.1-201ENST00000624291 1693 ntBASIC3.09□□□□□ -1.91
CDX2Q99626 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
CDX2Q99626 SPINK9-201ENST00000377906 453 ntAPPRIS P2 TSL 1 (best) BASIC3.09□□□□□ -1.91
CDX2Q99626 5S_rRNA.2-201ENST00000391293 112 ntBASIC3.09□□□□□ -1.91
CDX2Q99626 TAF9BP2-201ENST00000400856 499 ntBASIC3.09□□□□□ -1.91
CDX2Q99626 AC069218.2-201ENST00000411665 344 ntBASIC3.09□□□□□ -1.91
CDX2Q99626 AC004022.2-201ENST00000413824 193 ntBASIC3.09□□□□□ -1.91
CDX2Q99626 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC3.09□□□□□ -1.91
CDX2Q99626 AC009299.3-203ENST00000435692 1096 ntTSL 5 BASIC3.09□□□□□ -1.91
CDX2Q99626 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC3.09□□□□□ -1.91
CDX2Q99626 AC015971.1-202ENST00000439077 514 ntTSL 3 BASIC3.09□□□□□ -1.91
CDX2Q99626 RPS7P5-201ENST00000441482 581 ntBASIC3.09□□□□□ -1.91
CDX2Q99626 AL500527.1-201ENST00000448532 255 ntBASIC3.09□□□□□ -1.91
CDX2Q99626 MTND2P6-201ENST00000455337 1030 ntBASIC3.09□□□□□ -1.91
CDX2Q99626 AC108156.1-201ENST00000507849 481 ntTSL 3 BASIC3.09□□□□□ -1.91
CDX2Q99626 LINC02480-201ENST00000511875 612 ntTSL 2 BASIC3.09□□□□□ -1.91
CDX2Q99626 RNA5SP458-201ENST00000516188 119 ntBASIC3.09□□□□□ -1.91
CDX2Q99626 AC103833.1-201ENST00000517442 172 ntBASIC3.09□□□□□ -1.91
CDX2Q99626 AC018861.2-201ENST00000518078 513 ntTSL 2 BASIC3.09□□□□□ -1.91
CDX2Q99626 GCSAML-207ENST00000527541 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.09□□□□□ -1.91
CDX2Q99626 AC104009.1-203ENST00000531304 571 ntTSL 4 BASIC3.09□□□□□ -1.91
CDX2Q99626 AP004242.1-201ENST00000533701 349 ntBASIC3.09□□□□□ -1.91
CDX2Q99626 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC3.09□□□□□ -1.91
CDX2Q99626 AC087897.2-201ENST00000552639 678 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
CDX2Q99626 AL731537.2-201ENST00000561565 951 ntBASIC3.09□□□□□ -1.91
CDX2Q99626 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC3.09□□□□□ -1.91
CDX2Q99626 XIST_intron.1-201ENST00000619444 68 ntBASIC3.09□□□□□ -1.91
CDX2Q99626 AC092608.2-201ENST00000624427 218 ntBASIC3.09□□□□□ -1.91
CDX2Q99626 LINC02246-204ENST00000625278 740 ntTSL 5 BASIC3.09□□□□□ -1.91
CDX2Q99626 AC074099.1-201ENST00000634100 679 ntTSL 5 BASIC3.09□□□□□ -1.91
CDX2Q99626 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC3.09□□□□□ -1.91
CDX2Q99626 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.92
CDX2Q99626 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.92
CDX2Q99626 AC025034.1-201ENST00000552778 1711 ntTSL 3 BASIC3.08□□□□□ -1.92
CDX2Q99626 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.08□□□□□ -1.92
CDX2Q99626 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC3.08□□□□□ -1.92
CDX2Q99626 LINC01967-201ENST00000356047 755 ntTSL 5 BASIC3.08□□□□□ -1.92
CDX2Q99626 Y_RNA.226-201ENST00000364337 114 ntBASIC3.08□□□□□ -1.92
CDX2Q99626 RPS4XP7-201ENST00000406274 780 ntBASIC3.08□□□□□ -1.92
CDX2Q99626 RNU6ATAC37P-201ENST00000408328 131 ntBASIC3.08□□□□□ -1.92
CDX2Q99626 OR51A3P-201ENST00000413596 924 ntBASIC3.08□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 90.9 ms