Protein–RNA interactions for Protein: Q99567

NUP88, Nuclear pore complex protein Nup88, humanhuman

Predicted RBP Predictions only

Length 741 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88Q99567 AC027807.2-201ENST00000616099 408 ntBASIC4.91□□□□□ -1.62
NUP88Q99567 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC4.91□□□□□ -1.62
NUP88Q99567 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
NUP88Q99567 AL445264.1-201ENST00000621719 171 ntBASIC4.91□□□□□ -1.62
NUP88Q99567 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC4.91□□□□□ -1.62
NUP88Q99567 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
NUP88Q99567 IQCB2P-201ENST00000401788 1633 ntBASIC4.9□□□□□ -1.62
NUP88Q99567 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
NUP88Q99567 AC097504.1-201ENST00000515103 2415 ntBASIC4.9□□□□□ -1.62
NUP88Q99567 Y_RNA.194-201ENST00000363985 102 ntBASIC4.9□□□□□ -1.63
NUP88Q99567 PPIAP31-201ENST00000405422 495 ntBASIC4.9□□□□□ -1.63
NUP88Q99567 RN7SKP266-201ENST00000410232 287 ntBASIC4.9□□□□□ -1.63
NUP88Q99567 RNU6-628P-201ENST00000410675 107 ntBASIC4.9□□□□□ -1.63
NUP88Q99567 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC4.9□□□□□ -1.63
NUP88Q99567 UBTFL3-201ENST00000418934 1024 ntBASIC4.9□□□□□ -1.63
NUP88Q99567 EIF1P3-201ENST00000423841 334 ntBASIC4.9□□□□□ -1.63
NUP88Q99567 AL589823.1-201ENST00000429577 183 ntBASIC4.9□□□□□ -1.63
NUP88Q99567 LINC01857-201ENST00000429730 492 ntTSL 2 BASIC4.9□□□□□ -1.63
NUP88Q99567 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC4.9□□□□□ -1.63
NUP88Q99567 MTCO3P5-201ENST00000433620 714 ntBASIC4.9□□□□□ -1.63
NUP88Q99567 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC4.9□□□□□ -1.63
NUP88Q99567 AL353706.1-201ENST00000436728 494 ntBASIC4.9□□□□□ -1.63
NUP88Q99567 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
NUP88Q99567 PRR16-203ENST00000446965 1152 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
NUP88Q99567 AC239367.2-201ENST00000447309 705 ntBASIC4.9□□□□□ -1.63
NUP88Q99567 AL162151.2-201ENST00000448875 158 ntBASIC4.9□□□□□ -1.63
NUP88Q99567 AC010884.1-201ENST00000456519 642 ntTSL 3 BASIC4.9□□□□□ -1.63
NUP88Q99567 MTCO2P18-201ENST00000457151 658 ntBASIC4.9□□□□□ -1.63
NUP88Q99567 UBTFL6-201ENST00000477929 1024 ntBASIC4.9□□□□□ -1.63
NUP88Q99567 AC107021.1-202ENST00000480247 555 ntTSL 5 BASIC4.9□□□□□ -1.63
NUP88Q99567 HMGB1P36-201ENST00000487709 576 ntBASIC4.9□□□□□ -1.63
NUP88Q99567 AC104164.2-201ENST00000496953 495 ntBASIC4.9□□□□□ -1.63
NUP88Q99567 AC004069.2-201ENST00000505438 1114 ntBASIC4.9□□□□□ -1.63
NUP88Q99567 AC022447.3-201ENST00000506865 495 ntBASIC4.9□□□□□ -1.63
NUP88Q99567 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC4.9□□□□□ -1.63
NUP88Q99567 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC4.9□□□□□ -1.63
NUP88Q99567 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC4.9□□□□□ -1.63
NUP88Q99567 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC4.9□□□□□ -1.63
NUP88Q99567 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC4.9□□□□□ -1.63
NUP88Q99567 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC4.9□□□□□ -1.63
NUP88Q99567 AC091489.2-201ENST00000566263 604 ntBASIC4.9□□□□□ -1.63
NUP88Q99567 AC012414.6-201ENST00000568241 401 ntBASIC4.9□□□□□ -1.63
NUP88Q99567 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC4.9□□□□□ -1.63
NUP88Q99567 AC022655.2-201ENST00000577280 318 ntBASIC4.9□□□□□ -1.63
NUP88Q99567 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC4.9□□□□□ -1.63
NUP88Q99567 AP001180.3-201ENST00000582221 145 ntBASIC4.9□□□□□ -1.63
NUP88Q99567 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC4.9□□□□□ -1.63
NUP88Q99567 AC012065.4-201ENST00000602445 679 ntBASIC4.9□□□□□ -1.63
NUP88Q99567 AC025594.3-201ENST00000613068 790 ntBASIC4.9□□□□□ -1.63
NUP88Q99567 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC4.9□□□□□ -1.63
NUP88Q99567 AC092656.1-203ENST00000624134 423 ntBASIC4.9□□□□□ -1.63
NUP88Q99567 MIR6715B-201ENST00000637172 77 ntBASIC4.9□□□□□ -1.63
NUP88Q99567 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC4.9□□□□□ -1.63
NUP88Q99567 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC4.9□□□□□ -1.63
NUP88Q99567 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
NUP88Q99567 MAPK10-206ENST00000395161 4186 ntTSL 5 BASIC4.9□□□□□ -1.63
NUP88Q99567 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
NUP88Q99567 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC4.9□□□□□ -1.63
NUP88Q99567 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC4.9□□□□□ -1.63
NUP88Q99567 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
NUP88Q99567 MTND4P4-201ENST00000439033 1366 ntBASIC4.9□□□□□ -1.63
NUP88Q99567 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
NUP88Q99567 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
NUP88Q99567 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC4.89□□□□□ -1.63
NUP88Q99567 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
NUP88Q99567 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
NUP88Q99567 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC4.89□□□□□ -1.63
NUP88Q99567 RNU1-15P-201ENST00000353977 144 ntBASIC4.89□□□□□ -1.63
NUP88Q99567 AL161781.1-201ENST00000354277 403 ntBASIC4.89□□□□□ -1.63
NUP88Q99567 CGA-201ENST00000369582 729 ntTSL 5 BASIC4.89□□□□□ -1.63
NUP88Q99567 RNU6-730P-201ENST00000383954 104 ntBASIC4.89□□□□□ -1.63
NUP88Q99567 RNU6-356P-201ENST00000384140 107 ntBASIC4.89□□□□□ -1.63
NUP88Q99567 RNU6-339P-201ENST00000384310 107 ntBASIC4.89□□□□□ -1.63
NUP88Q99567 MIR1305-201ENST00000408300 86 ntBASIC4.89□□□□□ -1.63
NUP88Q99567 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
NUP88Q99567 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC4.89□□□□□ -1.63
NUP88Q99567 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC4.89□□□□□ -1.63
NUP88Q99567 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC4.89□□□□□ -1.63
NUP88Q99567 DLGAP5P1-201ENST00000430307 464 ntBASIC4.89□□□□□ -1.63
NUP88Q99567 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC4.89□□□□□ -1.63
NUP88Q99567 MUPP-201ENST00000438111 566 ntBASIC4.89□□□□□ -1.63
NUP88Q99567 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC4.89□□□□□ -1.63
NUP88Q99567 RPL29P29-201ENST00000448725 423 ntBASIC4.89□□□□□ -1.63
NUP88Q99567 TPTE2P5-203ENST00000458118 728 ntBASIC4.89□□□□□ -1.63
NUP88Q99567 OR5H5P-201ENST00000503164 928 ntBASIC4.89□□□□□ -1.63
NUP88Q99567 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC4.89□□□□□ -1.63
NUP88Q99567 NAT2-202ENST00000520116 716 ntTSL 3 BASIC4.89□□□□□ -1.63
NUP88Q99567 OR6C73P-201ENST00000546432 358 ntBASIC4.89□□□□□ -1.63
NUP88Q99567 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC4.89□□□□□ -1.63
NUP88Q99567 HMGB3P26-201ENST00000560051 582 ntBASIC4.89□□□□□ -1.63
NUP88Q99567 AC146944.4-201ENST00000602697 718 ntBASIC4.89□□□□□ -1.63
NUP88Q99567 AL355812.1-201ENST00000603215 216 ntBASIC4.89□□□□□ -1.63
NUP88Q99567 AC012557.2-201ENST00000605919 418 ntBASIC4.89□□□□□ -1.63
NUP88Q99567 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC4.89□□□□□ -1.63
NUP88Q99567 AL359893.1-201ENST00000447628 1580 ntBASIC4.89□□□□□ -1.63
NUP88Q99567 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC4.89□□□□□ -1.63
NUP88Q99567 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
NUP88Q99567 AC090229.1-201ENST00000590983 1609 ntBASIC4.89□□□□□ -1.63
NUP88Q99567 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
NUP88Q99567 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 170.4 ms