Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 MTND3P2-201ENST00000438452 342 ntBASIC4.87□□□□□ -1.63
CDK5RAP1Q96SZ6 RPL22P17-201ENST00000438729 315 ntBASIC4.87□□□□□ -1.63
CDK5RAP1Q96SZ6 RABEPKP1-201ENST00000440529 1026 ntBASIC4.87□□□□□ -1.63
CDK5RAP1Q96SZ6 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC4.87□□□□□ -1.63
CDK5RAP1Q96SZ6 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC4.87□□□□□ -1.63
CDK5RAP1Q96SZ6 BRK1P2-201ENST00000442875 223 ntBASIC4.87□□□□□ -1.63
CDK5RAP1Q96SZ6 H2AFZP6-201ENST00000444403 394 ntBASIC4.87□□□□□ -1.63
CDK5RAP1Q96SZ6 AL121877.1-201ENST00000453704 622 ntBASIC4.87□□□□□ -1.63
CDK5RAP1Q96SZ6 Z82190.1-201ENST00000454534 490 ntBASIC4.87□□□□□ -1.63
CDK5RAP1Q96SZ6 RPL18AP17-201ENST00000455326 198 ntBASIC4.87□□□□□ -1.63
CDK5RAP1Q96SZ6 RPS29P33-201ENST00000456717 146 ntBASIC4.87□□□□□ -1.63
CDK5RAP1Q96SZ6 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC4.87□□□□□ -1.63
CDK5RAP1Q96SZ6 AL591473.1-201ENST00000464297 313 ntBASIC4.87□□□□□ -1.63
CDK5RAP1Q96SZ6 AC023598.1-201ENST00000472521 361 ntBASIC4.87□□□□□ -1.63
CDK5RAP1Q96SZ6 AC006463.2-201ENST00000473326 348 ntBASIC4.87□□□□□ -1.63
CDK5RAP1Q96SZ6 AC090686.1-201ENST00000481577 749 ntBASIC4.87□□□□□ -1.63
CDK5RAP1Q96SZ6 NIP7P2-201ENST00000485801 544 ntBASIC4.87□□□□□ -1.63
CDK5RAP1Q96SZ6 LINC01181-201ENST00000503718 556 ntTSL 4 BASIC4.87□□□□□ -1.63
CDK5RAP1Q96SZ6 RNU6-1046P-201ENST00000516538 107 ntBASIC4.87□□□□□ -1.63
CDK5RAP1Q96SZ6 RN7SKP116-201ENST00000516902 319 ntBASIC4.87□□□□□ -1.63
CDK5RAP1Q96SZ6 RNU2-46P-201ENST00000517038 113 ntBASIC4.87□□□□□ -1.63
CDK5RAP1Q96SZ6 RN7SKP92-201ENST00000517266 244 ntBASIC4.87□□□□□ -1.63
CDK5RAP1Q96SZ6 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC4.87□□□□□ -1.63
CDK5RAP1Q96SZ6 AC005740.3-201ENST00000520882 344 ntTSL 2 BASIC4.87□□□□□ -1.63
CDK5RAP1Q96SZ6 CASP1-206ENST00000526568 1061 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
CDK5RAP1Q96SZ6 CASP1-216ENST00000534497 825 ntTSL 5 BASIC4.87□□□□□ -1.63
CDK5RAP1Q96SZ6 RPL21P5-201ENST00000554662 472 ntBASIC4.87□□□□□ -1.63
CDK5RAP1Q96SZ6 AC037471.2-201ENST00000564941 598 ntBASIC4.87□□□□□ -1.63
CDK5RAP1Q96SZ6 AC007151.1-201ENST00000572774 483 ntBASIC4.87□□□□□ -1.63
CDK5RAP1Q96SZ6 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC4.87□□□□□ -1.63
CDK5RAP1Q96SZ6 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC4.87□□□□□ -1.63
CDK5RAP1Q96SZ6 AL591926.2-202ENST00000615199 719 ntTSL 5 BASIC4.87□□□□□ -1.63
CDK5RAP1Q96SZ6 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
CDK5RAP1Q96SZ6 RMST_7.1-201ENST00000621935 268 ntBASIC4.87□□□□□ -1.63
CDK5RAP1Q96SZ6 AP000346.3-201ENST00000622821 210 ntBASIC4.87□□□□□ -1.63
CDK5RAP1Q96SZ6 NEAT1-202ENST00000501122 22743 ntBASIC4.87□□□□□ -1.63
CDK5RAP1Q96SZ6 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
CDK5RAP1Q96SZ6 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
CDK5RAP1Q96SZ6 AL031119.1-201ENST00000404707 1879 ntBASIC4.87□□□□□ -1.63
CDK5RAP1Q96SZ6 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
CDK5RAP1Q96SZ6 GALNT13-202ENST00000409237 2591 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
CDK5RAP1Q96SZ6 CDR1-202ENST00000625883 1485 ntBASIC4.87□□□□□ -1.63
CDK5RAP1Q96SZ6 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
CDK5RAP1Q96SZ6 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
CDK5RAP1Q96SZ6 SERPINA7-202ENST00000372563 1600 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
CDK5RAP1Q96SZ6 ALB-201ENST00000295897 2263 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
CDK5RAP1Q96SZ6 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
CDK5RAP1Q96SZ6 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
CDK5RAP1Q96SZ6 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
CDK5RAP1Q96SZ6 ARHGAP42P3-201ENST00000443989 2508 ntBASIC4.86□□□□□ -1.63
CDK5RAP1Q96SZ6 ZNF442-205ENST00000545749 1884 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
CDK5RAP1Q96SZ6 RBMS1-202ENST00000392753 3781 ntTSL 5 BASIC4.86□□□□□ -1.63
CDK5RAP1Q96SZ6 OR4A15-201ENST00000314706 1035 ntBASIC4.86□□□□□ -1.63
CDK5RAP1Q96SZ6 OR13G1-201ENST00000359688 1046 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
CDK5RAP1Q96SZ6 RNU6-777P-201ENST00000364265 104 ntBASIC4.86□□□□□ -1.63
CDK5RAP1Q96SZ6 RNA5SP505-201ENST00000364748 108 ntBASIC4.86□□□□□ -1.63
CDK5RAP1Q96SZ6 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
CDK5RAP1Q96SZ6 RNU6-1103P-201ENST00000384150 107 ntBASIC4.86□□□□□ -1.63
CDK5RAP1Q96SZ6 ATXN10-203ENST00000402380 564 ntTSL 4 BASIC4.86□□□□□ -1.63
CDK5RAP1Q96SZ6 MIR1303-201ENST00000408625 86 ntBASIC4.86□□□□□ -1.63
CDK5RAP1Q96SZ6 AL121885.1-201ENST00000417957 451 ntTSL 3 BASIC4.86□□□□□ -1.63
CDK5RAP1Q96SZ6 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC4.86□□□□□ -1.63
CDK5RAP1Q96SZ6 RPS26P47-201ENST00000427219 348 ntBASIC4.86□□□□□ -1.63
CDK5RAP1Q96SZ6 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
CDK5RAP1Q96SZ6 RPL31P35-201ENST00000431058 377 ntBASIC4.86□□□□□ -1.63
CDK5RAP1Q96SZ6 RPL7P54-201ENST00000438336 674 ntBASIC4.86□□□□□ -1.63
CDK5RAP1Q96SZ6 PPIAP17-201ENST00000438507 471 ntBASIC4.86□□□□□ -1.63
CDK5RAP1Q96SZ6 TPT1P13-201ENST00000449760 499 ntBASIC4.86□□□□□ -1.63
CDK5RAP1Q96SZ6 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC4.86□□□□□ -1.63
CDK5RAP1Q96SZ6 EIF4A1P11-201ENST00000451239 222 ntBASIC4.86□□□□□ -1.63
CDK5RAP1Q96SZ6 AL031668.1-201ENST00000451556 603 ntTSL 3 BASIC4.86□□□□□ -1.63
CDK5RAP1Q96SZ6 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC4.86□□□□□ -1.63
CDK5RAP1Q96SZ6 RN7SL354P-201ENST00000469282 294 ntBASIC4.86□□□□□ -1.63
CDK5RAP1Q96SZ6 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC4.86□□□□□ -1.63
CDK5RAP1Q96SZ6 AC096741.1-201ENST00000472250 846 ntBASIC4.86□□□□□ -1.63
CDK5RAP1Q96SZ6 RPL21P6-201ENST00000479171 504 ntBASIC4.86□□□□□ -1.63
CDK5RAP1Q96SZ6 MTND1P3-201ENST00000484956 952 ntBASIC4.86□□□□□ -1.63
CDK5RAP1Q96SZ6 AC007182.2-201ENST00000489251 402 ntBASIC4.86□□□□□ -1.63
CDK5RAP1Q96SZ6 KCTD9P5-201ENST00000504141 1170 ntBASIC4.86□□□□□ -1.63
CDK5RAP1Q96SZ6 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC4.86□□□□□ -1.63
CDK5RAP1Q96SZ6 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC4.86□□□□□ -1.63
CDK5RAP1Q96SZ6 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC4.86□□□□□ -1.63
CDK5RAP1Q96SZ6 AP001189.2-201ENST00000527320 189 ntBASIC4.86□□□□□ -1.63
CDK5RAP1Q96SZ6 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC4.86□□□□□ -1.63
CDK5RAP1Q96SZ6 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC4.86□□□□□ -1.63
CDK5RAP1Q96SZ6 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
CDK5RAP1Q96SZ6 AC105129.1-201ENST00000560250 297 ntBASIC4.86□□□□□ -1.63
CDK5RAP1Q96SZ6 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC4.86□□□□□ -1.63
CDK5RAP1Q96SZ6 DAB1-AS1-208ENST00000586465 748 ntTSL 5 BASIC4.86□□□□□ -1.63
CDK5RAP1Q96SZ6 HMGN1P30-201ENST00000589286 268 ntBASIC4.86□□□□□ -1.63
CDK5RAP1Q96SZ6 TTN-AS1-237ENST00000590743 812 ntTSL 5 BASIC4.86□□□□□ -1.63
CDK5RAP1Q96SZ6 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC4.86□□□□□ -1.63
CDK5RAP1Q96SZ6 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC4.86□□□□□ -1.63
CDK5RAP1Q96SZ6 VN1R80P-201ENST00000597126 338 ntBASIC4.86□□□□□ -1.63
CDK5RAP1Q96SZ6 LINC01081-201ENST00000597373 465 ntTSL 5 BASIC4.86□□□□□ -1.63
CDK5RAP1Q96SZ6 AC243960.4-201ENST00000600532 288 ntBASIC4.86□□□□□ -1.63
CDK5RAP1Q96SZ6 AC090948.2-201ENST00000607363 564 ntBASIC4.86□□□□□ -1.63
CDK5RAP1Q96SZ6 AL603758.1-201ENST00000618654 241 ntBASIC4.86□□□□□ -1.63
CDK5RAP1Q96SZ6 AC068722.2-201ENST00000618734 544 ntBASIC4.86□□□□□ -1.63
CDK5RAP1Q96SZ6 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC4.86□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 100.7 ms