Protein–RNA interactions for Protein: Q96RY7

IFT140, Intraflagellar transport protein 140 homolog, humanhuman

Predictions only

Length 1,462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140Q96RY7 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
IFT140Q96RY7 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
IFT140Q96RY7 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.78
IFT140Q96RY7 RPL9P7-201ENST00000330965 580 ntBASIC3.96□□□□□ -1.78
IFT140Q96RY7 SNORA80E-201ENST00000384744 137 ntBASIC3.96□□□□□ -1.78
IFT140Q96RY7 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC3.96□□□□□ -1.78
IFT140Q96RY7 ERMN-209ENST00000420719 1246 ntTSL 2 BASIC3.96□□□□□ -1.78
IFT140Q96RY7 MTCO3P11-201ENST00000455103 774 ntBASIC3.96□□□□□ -1.78
IFT140Q96RY7 LINC02497-201ENST00000515292 507 ntTSL 3 BASIC3.96□□□□□ -1.78
IFT140Q96RY7 PDCL2P2-201ENST00000533651 189 ntBASIC3.96□□□□□ -1.78
IFT140Q96RY7 AC023813.4-201ENST00000607580 580 ntBASIC3.96□□□□□ -1.78
IFT140Q96RY7 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.96□□□□□ -1.78
IFT140Q96RY7 HDX-206ENST00000506585 6158 ntTSL 2 BASIC3.96□□□□□ -1.78
IFT140Q96RY7 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
IFT140Q96RY7 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC3.96□□□□□ -1.78
IFT140Q96RY7 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC3.96□□□□□ -1.78
IFT140Q96RY7 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
IFT140Q96RY7 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.96□□□□□ -1.78
IFT140Q96RY7 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
IFT140Q96RY7 Y_RNA.140-201ENST00000363474 103 ntBASIC3.95□□□□□ -1.78
IFT140Q96RY7 MDM4-202ENST00000367180 547 ntTSL 3 BASIC3.95□□□□□ -1.78
IFT140Q96RY7 MLIP-IT1-201ENST00000441845 643 ntTSL 2 BASIC3.95□□□□□ -1.78
IFT140Q96RY7 AC007677.1-201ENST00000445757 515 ntBASIC3.95□□□□□ -1.78
IFT140Q96RY7 RN7SKP210-201ENST00000459176 261 ntBASIC3.95□□□□□ -1.78
IFT140Q96RY7 AL024509.2-201ENST00000493462 493 ntBASIC3.95□□□□□ -1.78
IFT140Q96RY7 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
IFT140Q96RY7 AP000857.1-201ENST00000532151 543 ntBASIC3.95□□□□□ -1.78
IFT140Q96RY7 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC3.95□□□□□ -1.78
IFT140Q96RY7 VN1R79P-201ENST00000593540 513 ntBASIC3.95□□□□□ -1.78
IFT140Q96RY7 MIR6845-201ENST00000613182 61 ntBASIC3.95□□□□□ -1.78
IFT140Q96RY7 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.95□□□□□ -1.78
IFT140Q96RY7 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC3.94□□□□□ -1.78
IFT140Q96RY7 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC3.94□□□□□ -1.78
IFT140Q96RY7 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC3.94□□□□□ -1.78
IFT140Q96RY7 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC3.94□□□□□ -1.78
IFT140Q96RY7 AC106872.3-201ENST00000495104 446 ntBASIC3.94□□□□□ -1.78
IFT140Q96RY7 ACTR6P1-201ENST00000514311 1104 ntBASIC3.94□□□□□ -1.78
IFT140Q96RY7 MIR5092-201ENST00000583139 88 ntBASIC3.94□□□□□ -1.78
IFT140Q96RY7 AP003117.2-201ENST00000606010 545 ntBASIC3.94□□□□□ -1.78
IFT140Q96RY7 OR5M3-201ENST00000312240 1051 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
IFT140Q96RY7 NRG4-201ENST00000394907 1159 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
IFT140Q96RY7 NPM1P49-201ENST00000448027 714 ntBASIC3.93□□□□□ -1.78
IFT140Q96RY7 AC093422.2-201ENST00000452599 686 ntTSL 2 BASIC3.93□□□□□ -1.78
IFT140Q96RY7 AC145141.1-201ENST00000510180 567 ntTSL 4 BASIC3.93□□□□□ -1.78
IFT140Q96RY7 AC108729.3-201ENST00000513484 108 ntBASIC3.93□□□□□ -1.78
IFT140Q96RY7 RNU6-295P-201ENST00000516901 104 ntBASIC3.93□□□□□ -1.78
IFT140Q96RY7 AL078612.2-201ENST00000525133 646 ntTSL 3 BASIC3.93□□□□□ -1.78
IFT140Q96RY7 AC007876.1-201ENST00000527562 983 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
IFT140Q96RY7 AC007688.2-201ENST00000545158 369 ntTSL 3 BASIC3.93□□□□□ -1.78
IFT140Q96RY7 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC3.93□□□□□ -1.78
IFT140Q96RY7 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC3.93□□□□□ -1.78
IFT140Q96RY7 NSRP1P1-201ENST00000444067 1693 ntBASIC3.93□□□□□ -1.78
IFT140Q96RY7 MIR365B-201ENST00000362317 111 ntBASIC3.92□□□□□ -1.78
IFT140Q96RY7 SNORA26.9-201ENST00000391322 122 ntBASIC3.92□□□□□ -1.78
IFT140Q96RY7 OR6C4-201ENST00000394256 1046 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
IFT140Q96RY7 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC3.92□□□□□ -1.78
IFT140Q96RY7 MRPL50P4-201ENST00000446432 475 ntBASIC3.92□□□□□ -1.78
IFT140Q96RY7 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3.92□□□□□ -1.78
IFT140Q96RY7 SUCLG2-AS1-203ENST00000496640 862 ntTSL 5 BASIC3.92□□□□□ -1.78
IFT140Q96RY7 THAP6-203ENST00000502620 582 ntTSL 3 BASIC3.92□□□□□ -1.78
IFT140Q96RY7 AC079380.1-201ENST00000507844 619 ntTSL 3 BASIC3.92□□□□□ -1.78
IFT140Q96RY7 AC112673.1-201ENST00000513168 575 ntBASIC3.92□□□□□ -1.78
IFT140Q96RY7 VTA1P2-201ENST00000520205 911 ntBASIC3.92□□□□□ -1.78
IFT140Q96RY7 CKS1BP7-201ENST00000522230 235 ntBASIC3.92□□□□□ -1.78
IFT140Q96RY7 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC3.92□□□□□ -1.78
IFT140Q96RY7 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC3.92□□□□□ -1.78
IFT140Q96RY7 PSMG2-204ENST00000585331 983 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
IFT140Q96RY7 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC3.92□□□□□ -1.78
IFT140Q96RY7 AC103710.2-201ENST00000609912 942 ntBASIC3.92□□□□□ -1.78
IFT140Q96RY7 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.92□□□□□ -1.78
IFT140Q96RY7 AL512643.1-201ENST00000635735 524 ntBASIC3.92□□□□□ -1.78
IFT140Q96RY7 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
IFT140Q96RY7 GTF2H2B-203ENST00000508065 1432 ntBASIC3.92□□□□□ -1.78
IFT140Q96RY7 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC3.92□□□□□ -1.78
IFT140Q96RY7 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.92□□□□□ -1.78
IFT140Q96RY7 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC3.92□□□□□ -1.78
IFT140Q96RY7 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC3.92□□□□□ -1.78
IFT140Q96RY7 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
IFT140Q96RY7 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.92□□□□□ -1.78
IFT140Q96RY7 RWDD4P2-201ENST00000426392 563 ntBASIC3.92□□□□□ -1.78
IFT140Q96RY7 AC018634.1-201ENST00000437554 401 ntBASIC3.92□□□□□ -1.78
IFT140Q96RY7 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC3.92□□□□□ -1.78
IFT140Q96RY7 RPS27P29-201ENST00000463110 252 ntBASIC3.92□□□□□ -1.78
IFT140Q96RY7 RWDD4P1-201ENST00000488019 565 ntBASIC3.92□□□□□ -1.78
IFT140Q96RY7 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC3.92□□□□□ -1.78
IFT140Q96RY7 SNORA70.14-201ENST00000516205 110 ntBASIC3.92□□□□□ -1.78
IFT140Q96RY7 AC090819.1-201ENST00000523800 1111 ntBASIC3.92□□□□□ -1.78
IFT140Q96RY7 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
IFT140Q96RY7 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
IFT140Q96RY7 RNU6-84P-201ENST00000607737 102 ntBASIC3.92□□□□□ -1.78
IFT140Q96RY7 AP004247.3-201ENST00000608682 624 ntBASIC3.92□□□□□ -1.78
IFT140Q96RY7 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
IFT140Q96RY7 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.91□□□□□ -1.78
IFT140Q96RY7 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC3.91□□□□□ -1.78
IFT140Q96RY7 AC066616.2-201ENST00000559334 1481 ntBASIC3.91□□□□□ -1.78
IFT140Q96RY7 CLECL1-201ENST00000327839 670 ntAPPRIS P3 TSL 1 (best) BASIC3.91□□□□□ -1.78
IFT140Q96RY7 RNU6-14P-201ENST00000384630 106 ntBASIC3.91□□□□□ -1.78
IFT140Q96RY7 SUMO1-205ENST00000409205 534 ntTSL 2 BASIC3.91□□□□□ -1.78
IFT140Q96RY7 RN7SKP32-201ENST00000410167 303 ntBASIC3.91□□□□□ -1.78
IFT140Q96RY7 RPS20P25-201ENST00000412447 352 ntBASIC3.91□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 86.1 ms