Protein–RNA interactions for Protein: Q96RL7

VPS13A, Vacuolar protein sorting-associated protein 13A, humanhuman

Predictions only

Length 3,174 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13AQ96RL7 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC2.29□□□□□ -2.04
VPS13AQ96RL7 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC2.29□□□□□ -2.04
VPS13AQ96RL7 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
VPS13AQ96RL7 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
VPS13AQ96RL7 AL590084.1-201ENST00000407885 387 ntBASIC2.28□□□□□ -2.04
VPS13AQ96RL7 FGF7P3-201ENST00000454645 303 ntBASIC2.28□□□□□ -2.04
VPS13AQ96RL7 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.28□□□□□ -2.04
VPS13AQ96RL7 PSMD5-AS1-215ENST00000640622 205 ntBASIC2.28□□□□□ -2.04
VPS13AQ96RL7 ZFAND6-223ENST00000616533 1653 ntAPPRIS P1 TSL 5 BASIC2.28□□□□□ -2.04
VPS13AQ96RL7 AL353743.4-201ENST00000422653 1547 ntBASIC2.28□□□□□ -2.04
VPS13AQ96RL7 AC025125.1-201ENST00000624743 1922 ntBASIC2.28□□□□□ -2.04
VPS13AQ96RL7 TTN-204ENST00000360870 18218 ntTSL 5 BASIC2.28□□□□□ -2.04
VPS13AQ96RL7 Y_RNA.374-201ENST00000365606 101 ntBASIC2.28□□□□□ -2.04
VPS13AQ96RL7 MDM4-202ENST00000367180 547 ntTSL 3 BASIC2.28□□□□□ -2.04
VPS13AQ96RL7 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC2.28□□□□□ -2.04
VPS13AQ96RL7 SNORA9.3-201ENST00000516383 129 ntBASIC2.28□□□□□ -2.04
VPS13AQ96RL7 RPS3AP4-201ENST00000555161 764 ntBASIC2.28□□□□□ -2.04
VPS13AQ96RL7 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC2.28□□□□□ -2.04
VPS13AQ96RL7 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
VPS13AQ96RL7 KLRC1-202ENST00000359151 1407 ntAPPRIS P4 TSL 1 (best) BASIC2.28□□□□□ -2.04
VPS13AQ96RL7 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.28□□□□□ -2.04
VPS13AQ96RL7 EIF5P1-201ENST00000400019 1231 ntBASIC2.28□□□□□ -2.04
VPS13AQ96RL7 LINC01867-201ENST00000435357 604 ntTSL 2 BASIC2.28□□□□□ -2.04
VPS13AQ96RL7 AP001205.1-201ENST00000521625 449 ntTSL 3 BASIC2.28□□□□□ -2.04
VPS13AQ96RL7 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC2.27□□□□□ -2.05
VPS13AQ96RL7 RPL23AP45-201ENST00000476406 468 ntBASIC2.27□□□□□ -2.05
VPS13AQ96RL7 RN7SL283P-201ENST00000489055 303 ntBASIC2.27□□□□□ -2.05
VPS13AQ96RL7 MAL2-205ENST00000521048 575 ntTSL 4 BASIC2.27□□□□□ -2.05
VPS13AQ96RL7 RPL23AP84-201ENST00000571193 464 ntBASIC2.27□□□□□ -2.05
VPS13AQ96RL7 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC2.27□□□□□ -2.05
VPS13AQ96RL7 ATP13A5-205ENST00000620313 709 ntTSL 5 BASIC2.27□□□□□ -2.05
VPS13AQ96RL7 MFSD8-245ENST00000641743 948 ntBASIC2.27□□□□□ -2.05
VPS13AQ96RL7 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC2.27□□□□□ -2.05
VPS13AQ96RL7 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC2.27□□□□□ -2.05
VPS13AQ96RL7 AC093311.1-201ENST00000506586 2021 ntBASIC2.27□□□□□ -2.05
VPS13AQ96RL7 RNA5SP325-201ENST00000363756 130 ntBASIC2.27□□□□□ -2.05
VPS13AQ96RL7 PTP4A1P7-201ENST00000423476 514 ntBASIC2.27□□□□□ -2.05
VPS13AQ96RL7 AL590652.1-201ENST00000453790 850 ntTSL 3 BASIC2.27□□□□□ -2.05
VPS13AQ96RL7 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC2.27□□□□□ -2.05
VPS13AQ96RL7 MIR1291-201ENST00000627649 87 ntBASIC2.27□□□□□ -2.05
VPS13AQ96RL7 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
VPS13AQ96RL7 FER-202ENST00000438717 1531 ntTSL 2 BASIC2.27□□□□□ -2.05
VPS13AQ96RL7 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.27□□□□□ -2.05
VPS13AQ96RL7 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC2.26□□□□□ -2.05
VPS13AQ96RL7 RPS15AP28-201ENST00000435088 386 ntBASIC2.26□□□□□ -2.05
VPS13AQ96RL7 AC093422.2-201ENST00000452599 686 ntTSL 2 BASIC2.26□□□□□ -2.05
VPS13AQ96RL7 RPL12P25-201ENST00000455592 494 ntBASIC2.26□□□□□ -2.05
VPS13AQ96RL7 AC093772.1-201ENST00000513519 506 ntTSL 2 BASIC2.26□□□□□ -2.05
VPS13AQ96RL7 CKS1BP7-201ENST00000522230 235 ntBASIC2.26□□□□□ -2.05
VPS13AQ96RL7 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
VPS13AQ96RL7 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.26□□□□□ -2.05
VPS13AQ96RL7 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC2.26□□□□□ -2.05
VPS13AQ96RL7 RNU6-457P-201ENST00000363999 107 ntBASIC2.26□□□□□ -2.05
VPS13AQ96RL7 LINC00317-201ENST00000419069 612 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
VPS13AQ96RL7 PPIAP17-201ENST00000438507 471 ntBASIC2.26□□□□□ -2.05
VPS13AQ96RL7 AL049552.1-201ENST00000444302 577 ntTSL 2 BASIC2.26□□□□□ -2.05
VPS13AQ96RL7 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC2.26□□□□□ -2.05
VPS13AQ96RL7 AC025881.1-201ENST00000518851 512 ntBASIC2.26□□□□□ -2.05
VPS13AQ96RL7 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC2.26□□□□□ -2.05
VPS13AQ96RL7 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
VPS13AQ96RL7 AC006971.1-201ENST00000407916 4486 ntBASIC2.26□□□□□ -2.05
VPS13AQ96RL7 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
VPS13AQ96RL7 RNU6-582P-201ENST00000362989 107 ntBASIC2.26□□□□□ -2.05
VPS13AQ96RL7 BTF3P4-201ENST00000418852 495 ntBASIC2.26□□□□□ -2.05
VPS13AQ96RL7 AC002378.1-201ENST00000432360 298 ntTSL 3 BASIC2.26□□□□□ -2.05
VPS13AQ96RL7 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC2.26□□□□□ -2.05
VPS13AQ96RL7 AC119751.1-201ENST00000513357 765 ntBASIC2.26□□□□□ -2.05
VPS13AQ96RL7 AL451137.1-201ENST00000523363 443 ntTSL 3 BASIC2.26□□□□□ -2.05
VPS13AQ96RL7 AC063952.1-203ENST00000634410 658 ntBASIC2.26□□□□□ -2.05
VPS13AQ96RL7 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.26□□□□□ -2.05
VPS13AQ96RL7 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
VPS13AQ96RL7 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
VPS13AQ96RL7 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
VPS13AQ96RL7 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC2.25□□□□□ -2.05
VPS13AQ96RL7 RPL21P41-201ENST00000459863 264 ntBASIC2.25□□□□□ -2.05
VPS13AQ96RL7 AC105918.1-201ENST00000474399 838 ntBASIC2.25□□□□□ -2.05
VPS13AQ96RL7 AC005840.1-201ENST00000498412 377 ntBASIC2.25□□□□□ -2.05
VPS13AQ96RL7 RNA5SP490-201ENST00000517141 136 ntBASIC2.25□□□□□ -2.05
VPS13AQ96RL7 AC025946.2-201ENST00000603398 234 ntBASIC2.25□□□□□ -2.05
VPS13AQ96RL7 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC2.25□□□□□ -2.05
VPS13AQ96RL7 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC2.25□□□□□ -2.05
VPS13AQ96RL7 MTCO1P22-201ENST00000604619 1360 ntBASIC2.25□□□□□ -2.05
VPS13AQ96RL7 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC2.25□□□□□ -2.05
VPS13AQ96RL7 IL1RAPL2-201ENST00000344799 1290 ntTSL 5 BASIC2.25□□□□□ -2.05
VPS13AQ96RL7 AL034379.1-201ENST00000423216 253 ntBASIC2.25□□□□□ -2.05
VPS13AQ96RL7 AL450263.2-201ENST00000439400 589 ntBASIC2.25□□□□□ -2.05
VPS13AQ96RL7 AC080013.2-201ENST00000460866 323 ntBASIC2.25□□□□□ -2.05
VPS13AQ96RL7 ALDH7A1P3-201ENST00000492517 345 ntBASIC2.25□□□□□ -2.05
VPS13AQ96RL7 STARD13-AS-208ENST00000589472 859 ntTSL 5 BASIC2.25□□□□□ -2.05
VPS13AQ96RL7 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC2.25□□□□□ -2.05
VPS13AQ96RL7 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC2.25□□□□□ -2.05
VPS13AQ96RL7 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
VPS13AQ96RL7 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
VPS13AQ96RL7 AC004520.1-201ENST00000608362 1413 ntBASIC2.25□□□□□ -2.05
VPS13AQ96RL7 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
VPS13AQ96RL7 YWHAZ-219ENST00000522542 1394 ntTSL 2 BASIC2.25□□□□□ -2.05
VPS13AQ96RL7 OR11H5P-202ENST00000641612 1325 ntBASIC2.25□□□□□ -2.05
VPS13AQ96RL7 USP9YP6-201ENST00000413550 854 ntBASIC2.24□□□□□ -2.05
VPS13AQ96RL7 AL451074.5-201ENST00000415894 435 ntBASIC2.24□□□□□ -2.05
VPS13AQ96RL7 P4HA2-AS1-201ENST00000417667 839 ntTSL 3 BASIC2.24□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 106.8 ms