Protein–RNA interactions for Protein: Q96P16

RPRD1A, Regulation of nuclear pre-mRNA domain-containing protein 1A, humanhuman

Predicted RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1AQ96P16 LINC01861-201ENST00000509568 537 ntTSL 4 BASIC3.39□□□□□ -1.87
RPRD1AQ96P16 TXNP6-201ENST00000510190 310 ntBASIC3.39□□□□□ -1.87
RPRD1AQ96P16 MTCO2P32-201ENST00000514865 403 ntBASIC3.39□□□□□ -1.87
RPRD1AQ96P16 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
RPRD1AQ96P16 OR4A45P-201ENST00000529954 901 ntBASIC3.39□□□□□ -1.87
RPRD1AQ96P16 HIGD1AP1-201ENST00000550979 275 ntBASIC3.39□□□□□ -1.87
RPRD1AQ96P16 AC090971.2-201ENST00000558142 510 ntTSL 3 BASIC3.39□□□□□ -1.87
RPRD1AQ96P16 AC124283.4-201ENST00000581815 456 ntBASIC3.39□□□□□ -1.87
RPRD1AQ96P16 AL669831.4-202ENST00000590817 238 ntBASIC3.39□□□□□ -1.87
RPRD1AQ96P16 CKS1BP3-201ENST00000600888 237 ntBASIC3.39□□□□□ -1.87
RPRD1AQ96P16 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC3.39□□□□□ -1.87
RPRD1AQ96P16 AC025588.3-201ENST00000604182 274 ntBASIC3.39□□□□□ -1.87
RPRD1AQ96P16 AL157817.1-201ENST00000614264 790 ntBASIC3.39□□□□□ -1.87
RPRD1AQ96P16 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC3.39□□□□□ -1.87
RPRD1AQ96P16 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC3.39□□□□□ -1.87
RPRD1AQ96P16 AC098679.5-201ENST00000624394 571 ntBASIC3.39□□□□□ -1.87
RPRD1AQ96P16 AL590396.4-201ENST00000636779 956 ntBASIC3.39□□□□□ -1.87
RPRD1AQ96P16 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC3.39□□□□□ -1.87
RPRD1AQ96P16 EFTUD1P2-201ENST00000514817 1603 ntBASIC3.39□□□□□ -1.87
RPRD1AQ96P16 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
RPRD1AQ96P16 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC3.39□□□□□ -1.87
RPRD1AQ96P16 THUMPD3P1-201ENST00000506556 1480 ntBASIC3.39□□□□□ -1.87
RPRD1AQ96P16 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
RPRD1AQ96P16 MTND5P27-201ENST00000428871 1720 ntBASIC3.39□□□□□ -1.87
RPRD1AQ96P16 AL512283.1-201ENST00000606756 1384 ntBASIC3.38□□□□□ -1.87
RPRD1AQ96P16 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.38□□□□□ -1.87
RPRD1AQ96P16 SGO1P1-201ENST00000603525 1447 ntBASIC3.38□□□□□ -1.87
RPRD1AQ96P16 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.38□□□□□ -1.87
RPRD1AQ96P16 RNA5SP387-201ENST00000364226 106 ntBASIC3.38□□□□□ -1.87
RPRD1AQ96P16 DNAH14-203ENST00000366848 929 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
RPRD1AQ96P16 RNU6-339P-201ENST00000384310 107 ntBASIC3.38□□□□□ -1.87
RPRD1AQ96P16 MIR16-1-201ENST00000385271 89 ntBASIC3.38□□□□□ -1.87
RPRD1AQ96P16 RNU6-932P-201ENST00000391108 106 ntBASIC3.38□□□□□ -1.87
RPRD1AQ96P16 RNU4-78P-201ENST00000410940 126 ntBASIC3.38□□□□□ -1.87
RPRD1AQ96P16 USP9YP19-201ENST00000412165 485 ntBASIC3.38□□□□□ -1.87
RPRD1AQ96P16 AC091862.1-201ENST00000438016 1100 ntBASIC3.38□□□□□ -1.87
RPRD1AQ96P16 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC3.38□□□□□ -1.87
RPRD1AQ96P16 AC002542.1-201ENST00000440683 193 ntBASIC3.38□□□□□ -1.87
RPRD1AQ96P16 ATP5C1P1-201ENST00000441945 895 ntBASIC3.38□□□□□ -1.87
RPRD1AQ96P16 RPL7P59-201ENST00000447700 943 ntBASIC3.38□□□□□ -1.87
RPRD1AQ96P16 HMGN3P1-201ENST00000453847 193 ntBASIC3.38□□□□□ -1.87
RPRD1AQ96P16 BX510359.1-201ENST00000456973 237 ntBASIC3.38□□□□□ -1.87
RPRD1AQ96P16 ARPC3P2-201ENST00000457786 533 ntBASIC3.38□□□□□ -1.87
RPRD1AQ96P16 RNU7-140P-201ENST00000459546 60 ntBASIC3.38□□□□□ -1.87
RPRD1AQ96P16 AC091179.1-201ENST00000461606 579 ntBASIC3.38□□□□□ -1.87
RPRD1AQ96P16 RPS27P29-201ENST00000463110 252 ntBASIC3.38□□□□□ -1.87
RPRD1AQ96P16 AC006483.1-201ENST00000487308 313 ntBASIC3.38□□□□□ -1.87
RPRD1AQ96P16 AC011352.3-201ENST00000505162 593 ntBASIC3.38□□□□□ -1.87
RPRD1AQ96P16 AC024132.3-201ENST00000513616 649 ntTSL 5 BASIC3.38□□□□□ -1.87
RPRD1AQ96P16 HMGB1P1-201ENST00000522557 636 ntBASIC3.38□□□□□ -1.87
RPRD1AQ96P16 AC023442.2-201ENST00000526455 270 ntTSL 3 BASIC3.38□□□□□ -1.87
RPRD1AQ96P16 LRRC37A5P-202ENST00000536054 1095 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
RPRD1AQ96P16 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC3.38□□□□□ -1.87
RPRD1AQ96P16 MIR4789-201ENST00000577469 82 ntBASIC3.38□□□□□ -1.87
RPRD1AQ96P16 AC068025.2-201ENST00000584958 419 ntTSL 5 BASIC3.38□□□□□ -1.87
RPRD1AQ96P16 AL606834.2-201ENST00000602954 668 ntBASIC3.38□□□□□ -1.87
RPRD1AQ96P16 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC3.38□□□□□ -1.87
RPRD1AQ96P16 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC3.38□□□□□ -1.87
RPRD1AQ96P16 AC013468.1-201ENST00000608680 598 ntBASIC3.38□□□□□ -1.87
RPRD1AQ96P16 AC009464.1-201ENST00000615731 469 ntBASIC3.38□□□□□ -1.87
RPRD1AQ96P16 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
RPRD1AQ96P16 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.38□□□□□ -1.87
RPRD1AQ96P16 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
RPRD1AQ96P16 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
RPRD1AQ96P16 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC3.38□□□□□ -1.87
RPRD1AQ96P16 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC3.38□□□□□ -1.87
RPRD1AQ96P16 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.37□□□□□ -1.87
RPRD1AQ96P16 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC3.37□□□□□ -1.87
RPRD1AQ96P16 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC3.37□□□□□ -1.87
RPRD1AQ96P16 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
RPRD1AQ96P16 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC3.37□□□□□ -1.87
RPRD1AQ96P16 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC3.37□□□□□ -1.87
RPRD1AQ96P16 RNU6-619P-201ENST00000365146 108 ntBASIC3.37□□□□□ -1.87
RPRD1AQ96P16 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
RPRD1AQ96P16 RNU6-1181P-201ENST00000384191 106 ntBASIC3.37□□□□□ -1.87
RPRD1AQ96P16 MIR649-201ENST00000384843 97 ntBASIC3.37□□□□□ -1.87
RPRD1AQ96P16 AL121972.1-201ENST00000402023 252 ntBASIC3.37□□□□□ -1.87
RPRD1AQ96P16 AL357075.1-201ENST00000404107 726 ntBASIC3.37□□□□□ -1.87
RPRD1AQ96P16 RNU6-55P-201ENST00000411092 107 ntBASIC3.37□□□□□ -1.87
RPRD1AQ96P16 RNU6-954P-201ENST00000411355 107 ntBASIC3.37□□□□□ -1.87
RPRD1AQ96P16 HMGB3P23-201ENST00000414981 585 ntBASIC3.37□□□□□ -1.87
RPRD1AQ96P16 KRR1P1-201ENST00000419430 803 ntBASIC3.37□□□□□ -1.87
RPRD1AQ96P16 AC012498.1-201ENST00000424037 437 ntBASIC3.37□□□□□ -1.87
RPRD1AQ96P16 AC016644.1-201ENST00000438553 434 ntTSL 2 BASIC3.37□□□□□ -1.87
RPRD1AQ96P16 AL158053.1-201ENST00000441503 453 ntBASIC3.37□□□□□ -1.87
RPRD1AQ96P16 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.37□□□□□ -1.87
RPRD1AQ96P16 SSXP4-201ENST00000451349 245 ntBASIC3.37□□□□□ -1.87
RPRD1AQ96P16 MRPS31P2-201ENST00000451581 518 ntBASIC3.37□□□□□ -1.87
RPRD1AQ96P16 AC104073.1-201ENST00000451988 151 ntBASIC3.37□□□□□ -1.87
RPRD1AQ96P16 AC008379.1-201ENST00000463655 464 ntBASIC3.37□□□□□ -1.87
RPRD1AQ96P16 RN7SL807P-201ENST00000470923 297 ntBASIC3.37□□□□□ -1.87
RPRD1AQ96P16 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
RPRD1AQ96P16 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC3.37□□□□□ -1.87
RPRD1AQ96P16 ZBTB20-AS3-201ENST00000498630 464 ntTSL 3 BASIC3.37□□□□□ -1.87
RPRD1AQ96P16 OR5H5P-201ENST00000503164 928 ntBASIC3.37□□□□□ -1.87
RPRD1AQ96P16 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC3.37□□□□□ -1.87
RPRD1AQ96P16 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC3.37□□□□□ -1.87
RPRD1AQ96P16 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC3.37□□□□□ -1.87
RPRD1AQ96P16 RNU6-1073P-201ENST00000517182 106 ntBASIC3.37□□□□□ -1.87
RPRD1AQ96P16 CTHRC1-204ENST00000520880 560 ntTSL 4 BASIC3.37□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 81.1 ms