Protein–RNA interactions for Protein: Q96NR3

PTCHD1, Patched domain-containing protein 1, humanhuman

Predictions only

Length 888 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD1Q96NR3 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
PTCHD1Q96NR3 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC4.98□□□□□ -1.61
PTCHD1Q96NR3 ZNF782-208ENST00000535338 3296 ntAPPRIS P1 TSL 3 BASIC4.98□□□□□ -1.61
PTCHD1Q96NR3 DCTN4-201ENST00000424236 4054 ntTSL 2 BASIC4.97□□□□□ -1.61
PTCHD1Q96NR3 HAT1-201ENST00000264108 1626 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
PTCHD1Q96NR3 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
PTCHD1Q96NR3 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC4.97□□□□□ -1.61
PTCHD1Q96NR3 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
PTCHD1Q96NR3 CDC14A-206ENST00000635056 2056 ntTSL 2 BASIC4.97□□□□□ -1.61
PTCHD1Q96NR3 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC4.97□□□□□ -1.61
PTCHD1Q96NR3 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
PTCHD1Q96NR3 OR5AN1-201ENST00000313940 1037 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
PTCHD1Q96NR3 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC4.97□□□□□ -1.61
PTCHD1Q96NR3 AC073343.1-201ENST00000328239 651 ntBASIC4.97□□□□□ -1.61
PTCHD1Q96NR3 MAX-203ENST00000341653 330 ntTSL 2 BASIC4.97□□□□□ -1.61
PTCHD1Q96NR3 IARS-201ENST00000375627 697 ntTSL 3 BASIC4.97□□□□□ -1.61
PTCHD1Q96NR3 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC4.97□□□□□ -1.61
PTCHD1Q96NR3 RNU2-15P-201ENST00000410692 191 ntBASIC4.97□□□□□ -1.61
PTCHD1Q96NR3 RNU6-603P-201ENST00000411403 107 ntBASIC4.97□□□□□ -1.61
PTCHD1Q96NR3 AC069213.2-201ENST00000420238 366 ntBASIC4.97□□□□□ -1.61
PTCHD1Q96NR3 HSPE1P1-201ENST00000421494 318 ntBASIC4.97□□□□□ -1.61
PTCHD1Q96NR3 AL035404.2-201ENST00000424418 304 ntTSL 3 BASIC4.97□□□□□ -1.61
PTCHD1Q96NR3 AL139148.1-201ENST00000427122 680 ntBASIC4.97□□□□□ -1.61
PTCHD1Q96NR3 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
PTCHD1Q96NR3 MTATP6P16-201ENST00000434543 526 ntBASIC4.97□□□□□ -1.61
PTCHD1Q96NR3 AL121974.1-201ENST00000437859 377 ntTSL 3 BASIC4.97□□□□□ -1.61
PTCHD1Q96NR3 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
PTCHD1Q96NR3 AC127537.2-201ENST00000439258 465 ntBASIC4.97□□□□□ -1.61
PTCHD1Q96NR3 RPS29P15-201ENST00000458329 171 ntBASIC4.97□□□□□ -1.61
PTCHD1Q96NR3 AC022034.3-201ENST00000471393 478 ntBASIC4.97□□□□□ -1.61
PTCHD1Q96NR3 AL139099.1-201ENST00000497398 403 ntBASIC4.97□□□□□ -1.61
PTCHD1Q96NR3 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC4.97□□□□□ -1.61
PTCHD1Q96NR3 Y_RNA.665-201ENST00000516177 98 ntBASIC4.97□□□□□ -1.61
PTCHD1Q96NR3 RN7SKP219-201ENST00000516825 296 ntBASIC4.97□□□□□ -1.61
PTCHD1Q96NR3 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC4.97□□□□□ -1.61
PTCHD1Q96NR3 AC103843.2-201ENST00000530523 682 ntBASIC4.97□□□□□ -1.61
PTCHD1Q96NR3 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC4.97□□□□□ -1.61
PTCHD1Q96NR3 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC4.97□□□□□ -1.61
PTCHD1Q96NR3 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC4.97□□□□□ -1.61
PTCHD1Q96NR3 AC127381.1-201ENST00000555979 939 ntBASIC4.97□□□□□ -1.61
PTCHD1Q96NR3 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC4.97□□□□□ -1.61
PTCHD1Q96NR3 AC113418.1-201ENST00000569928 517 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
PTCHD1Q96NR3 SLC14A2-AS1-201ENST00000585759 494 ntTSL 3 BASIC4.97□□□□□ -1.61
PTCHD1Q96NR3 AC025588.3-201ENST00000604182 274 ntBASIC4.97□□□□□ -1.61
PTCHD1Q96NR3 AC010998.2-201ENST00000605549 625 ntTSL 5 BASIC4.97□□□□□ -1.61
PTCHD1Q96NR3 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC4.97□□□□□ -1.61
PTCHD1Q96NR3 SDR42E1P1-201ENST00000611327 477 ntBASIC4.97□□□□□ -1.61
PTCHD1Q96NR3 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC4.97□□□□□ -1.61
PTCHD1Q96NR3 AC015871.5-202ENST00000623252 701 ntBASIC4.97□□□□□ -1.61
PTCHD1Q96NR3 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC4.97□□□□□ -1.61
PTCHD1Q96NR3 SMG1P6-201ENST00000532337 2930 ntBASIC4.97□□□□□ -1.61
PTCHD1Q96NR3 AL138713.1-201ENST00000624026 2130 ntBASIC4.97□□□□□ -1.61
PTCHD1Q96NR3 ACE2-201ENST00000252519 3393 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
PTCHD1Q96NR3 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC4.97□□□□□ -1.61
PTCHD1Q96NR3 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
PTCHD1Q96NR3 CCPG1-202ENST00000425574 1945 ntTSL 2 BASIC4.97□□□□□ -1.61
PTCHD1Q96NR3 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC4.97□□□□□ -1.61
PTCHD1Q96NR3 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC4.97□□□□□ -1.61
PTCHD1Q96NR3 ADGRF2-202ENST00000398742 4895 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
PTCHD1Q96NR3 AC002525.1-201ENST00000624392 1622 ntBASIC4.97□□□□□ -1.61
PTCHD1Q96NR3 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC4.97□□□□□ -1.61
PTCHD1Q96NR3 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
PTCHD1Q96NR3 AC008691.1-207ENST00000636819 4154 ntTSL 5 BASIC4.97□□□□□ -1.61
PTCHD1Q96NR3 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC4.97□□□□□ -1.61
PTCHD1Q96NR3 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC4.97□□□□□ -1.61
PTCHD1Q96NR3 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC4.96□□□□□ -1.61
PTCHD1Q96NR3 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC4.96□□□□□ -1.61
PTCHD1Q96NR3 C4BPAP1-201ENST00000415474 1893 ntBASIC4.96□□□□□ -1.61
PTCHD1Q96NR3 DAZ4-205ENST00000440066 1891 ntTSL 5 BASIC4.96□□□□□ -1.61
PTCHD1Q96NR3 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC4.96□□□□□ -1.61
PTCHD1Q96NR3 DAZ1-206ENST00000620725 1891 ntTSL 5 BASIC4.96□□□□□ -1.61
PTCHD1Q96NR3 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC4.96□□□□□ -1.61
PTCHD1Q96NR3 NUDT12-202ENST00000507423 1781 ntTSL 2 BASIC4.96□□□□□ -1.61
PTCHD1Q96NR3 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC4.96□□□□□ -1.61
PTCHD1Q96NR3 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC4.96□□□□□ -1.62
PTCHD1Q96NR3 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC4.96□□□□□ -1.62
PTCHD1Q96NR3 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC4.96□□□□□ -1.62
PTCHD1Q96NR3 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC4.96□□□□□ -1.62
PTCHD1Q96NR3 AP004289.2-201ENST00000444413 1457 ntBASIC4.96□□□□□ -1.62
PTCHD1Q96NR3 ZNF569-203ENST00000392150 1918 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
PTCHD1Q96NR3 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
PTCHD1Q96NR3 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC4.96□□□□□ -1.62
PTCHD1Q96NR3 PCAT14-202ENST00000627127 3935 ntBASIC4.96□□□□□ -1.62
PTCHD1Q96NR3 OR4N5-201ENST00000333629 927 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
PTCHD1Q96NR3 Y_RNA.259-201ENST00000364619 101 ntBASIC4.96□□□□□ -1.62
PTCHD1Q96NR3 RNU4-66P-201ENST00000365199 138 ntBASIC4.96□□□□□ -1.62
PTCHD1Q96NR3 FABP7-202ENST00000368444 1026 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
PTCHD1Q96NR3 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
PTCHD1Q96NR3 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
PTCHD1Q96NR3 AL583835.1-201ENST00000399570 407 ntBASIC4.96□□□□□ -1.62
PTCHD1Q96NR3 IL6-206ENST00000407492 926 ntTSL 3 BASIC4.96□□□□□ -1.62
PTCHD1Q96NR3 HMGN1P24-201ENST00000412282 298 ntBASIC4.96□□□□□ -1.62
PTCHD1Q96NR3 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC4.96□□□□□ -1.62
PTCHD1Q96NR3 MED13P1-201ENST00000428342 171 ntBASIC4.96□□□□□ -1.62
PTCHD1Q96NR3 AL591623.2-201ENST00000449978 222 ntBASIC4.96□□□□□ -1.62
PTCHD1Q96NR3 AC079168.1-201ENST00000458741 345 ntBASIC4.96□□□□□ -1.62
PTCHD1Q96NR3 RPL7L1P8-201ENST00000469911 741 ntBASIC4.96□□□□□ -1.62
PTCHD1Q96NR3 AP000797.2-201ENST00000475768 606 ntBASIC4.96□□□□□ -1.62
PTCHD1Q96NR3 RPS18P6-201ENST00000476880 458 ntBASIC4.96□□□□□ -1.62
PTCHD1Q96NR3 AC126389.1-201ENST00000477436 290 ntBASIC4.96□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 107.9 ms