Protein–RNA interactions for Protein: Q96LT7

C9orf72, Guanine nucleotide exchange C9orf72, humanhuman

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf72Q96LT7 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC3.18□□□□□ -1.9
C9orf72Q96LT7 AC108863.1-201ENST00000520863 650 ntTSL 3 BASIC3.18□□□□□ -1.9
C9orf72Q96LT7 CASP1-212ENST00000531166 300 ntTSL 5 BASIC3.18□□□□□ -1.9
C9orf72Q96LT7 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC3.18□□□□□ -1.9
C9orf72Q96LT7 MIR5004-201ENST00000579078 107 ntBASIC3.18□□□□□ -1.9
C9orf72Q96LT7 AC012254.4-201ENST00000588843 273 ntBASIC3.18□□□□□ -1.9
C9orf72Q96LT7 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC3.18□□□□□ -1.9
C9orf72Q96LT7 AC104307.1-201ENST00000616142 196 ntBASIC3.18□□□□□ -1.9
C9orf72Q96LT7 FRG1HP-204ENST00000617940 757 ntBASIC3.18□□□□□ -1.9
C9orf72Q96LT7 AL136164.4-201ENST00000625013 2135 ntBASIC3.18□□□□□ -1.9
C9orf72Q96LT7 MEG8-222ENST00000637332 1237 ntTSL 5 BASIC3.18□□□□□ -1.9
C9orf72Q96LT7 ZNF33BP1-201ENST00000452497 1834 ntBASIC3.18□□□□□ -1.9
C9orf72Q96LT7 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.18□□□□□ -1.9
C9orf72Q96LT7 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
C9orf72Q96LT7 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.18□□□□□ -1.9
C9orf72Q96LT7 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
C9orf72Q96LT7 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
C9orf72Q96LT7 AC008264.2-201ENST00000610193 3731 ntBASIC3.18□□□□□ -1.9
C9orf72Q96LT7 AC116096.1-201ENST00000566804 2314 ntBASIC3.18□□□□□ -1.9
C9orf72Q96LT7 AC110774.1-201ENST00000623567 2018 ntBASIC3.17□□□□□ -1.9
C9orf72Q96LT7 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC3.17□□□□□ -1.9
C9orf72Q96LT7 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
C9orf72Q96LT7 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
C9orf72Q96LT7 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
C9orf72Q96LT7 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
C9orf72Q96LT7 OR8K1-201ENST00000279783 1087 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
C9orf72Q96LT7 RNU6-263P-201ENST00000363811 107 ntBASIC3.17□□□□□ -1.9
C9orf72Q96LT7 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC3.17□□□□□ -1.9
C9orf72Q96LT7 BX248415.1-201ENST00000367421 1043 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
C9orf72Q96LT7 MT-TC-201ENST00000387405 66 ntBASIC3.17□□□□□ -1.9
C9orf72Q96LT7 SNORA48.2-201ENST00000390926 124 ntBASIC3.17□□□□□ -1.9
C9orf72Q96LT7 AC012498.1-201ENST00000424037 437 ntBASIC3.17□□□□□ -1.9
C9orf72Q96LT7 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC3.17□□□□□ -1.9
C9orf72Q96LT7 MORF4L1P7-201ENST00000426038 703 ntBASIC3.17□□□□□ -1.9
C9orf72Q96LT7 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC3.17□□□□□ -1.9
C9orf72Q96LT7 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC3.17□□□□□ -1.9
C9orf72Q96LT7 AC244505.4-201ENST00000434905 287 ntBASIC3.17□□□□□ -1.9
C9orf72Q96LT7 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC3.17□□□□□ -1.9
C9orf72Q96LT7 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC3.17□□□□□ -1.9
C9orf72Q96LT7 RAB11AP1-201ENST00000442978 646 ntBASIC3.17□□□□□ -1.9
C9orf72Q96LT7 SSXP5-201ENST00000443473 287 ntBASIC3.17□□□□□ -1.9
C9orf72Q96LT7 RAD51AP1P1-201ENST00000484195 1001 ntBASIC3.17□□□□□ -1.9
C9orf72Q96LT7 AC006483.1-201ENST00000487308 313 ntBASIC3.17□□□□□ -1.9
C9orf72Q96LT7 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC3.17□□□□□ -1.9
C9orf72Q96LT7 RNU6-488P-201ENST00000515918 99 ntBASIC3.17□□□□□ -1.9
C9orf72Q96LT7 LINC00535-204ENST00000520513 305 ntTSL 3 BASIC3.17□□□□□ -1.9
C9orf72Q96LT7 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC3.17□□□□□ -1.9
C9orf72Q96LT7 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC3.17□□□□□ -1.9
C9orf72Q96LT7 AC005951.1-201ENST00000576706 485 ntBASIC3.17□□□□□ -1.9
C9orf72Q96LT7 AL450270.1-201ENST00000606160 391 ntBASIC3.17□□□□□ -1.9
C9orf72Q96LT7 AL451074.6-201ENST00000608512 729 ntBASIC3.17□□□□□ -1.9
C9orf72Q96LT7 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC3.17□□□□□ -1.9
C9orf72Q96LT7 AC087521.4-201ENST00000637427 289 ntTSL 5 BASIC3.17□□□□□ -1.9
C9orf72Q96LT7 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC3.17□□□□□ -1.9
C9orf72Q96LT7 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC3.17□□□□□ -1.9
C9orf72Q96LT7 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC3.17□□□□□ -1.9
C9orf72Q96LT7 AP001350.1-201ENST00000601906 1524 ntBASIC3.17□□□□□ -1.9
C9orf72Q96LT7 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC3.17□□□□□ -1.9
C9orf72Q96LT7 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC3.17□□□□□ -1.9
C9orf72Q96LT7 AC117529.2-201ENST00000512159 2068 ntBASIC3.16□□□□□ -1.9
C9orf72Q96LT7 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.16□□□□□ -1.9
C9orf72Q96LT7 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
C9orf72Q96LT7 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
C9orf72Q96LT7 YWHAZ-219ENST00000522542 1394 ntTSL 2 BASIC3.16□□□□□ -1.9
C9orf72Q96LT7 AC093908.1-201ENST00000623125 8092 ntBASIC3.16□□□□□ -1.9
C9orf72Q96LT7 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
C9orf72Q96LT7 RNA5SP374-201ENST00000362939 125 ntBASIC3.16□□□□□ -1.9
C9orf72Q96LT7 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC3.16□□□□□ -1.9
C9orf72Q96LT7 AL353678.1-201ENST00000422735 741 ntBASIC3.16□□□□□ -1.9
C9orf72Q96LT7 AC073310.1-201ENST00000423226 1033 ntBASIC3.16□□□□□ -1.9
C9orf72Q96LT7 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC3.16□□□□□ -1.9
C9orf72Q96LT7 AC010881.1-201ENST00000433830 235 ntBASIC3.16□□□□□ -1.9
C9orf72Q96LT7 RPS26P30-201ENST00000443431 335 ntBASIC3.16□□□□□ -1.9
C9orf72Q96LT7 ELOCP13-201ENST00000443934 329 ntBASIC3.16□□□□□ -1.9
C9orf72Q96LT7 LINC01309-201ENST00000444795 492 ntTSL 3 BASIC3.16□□□□□ -1.9
C9orf72Q96LT7 SSXP4-201ENST00000451349 245 ntBASIC3.16□□□□□ -1.9
C9orf72Q96LT7 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC3.16□□□□□ -1.9
C9orf72Q96LT7 AC089999.1-201ENST00000460336 374 ntBASIC3.16□□□□□ -1.9
C9orf72Q96LT7 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC3.16□□□□□ -1.9
C9orf72Q96LT7 PRDX3P4-201ENST00000470828 747 ntBASIC3.16□□□□□ -1.9
C9orf72Q96LT7 AC109925.1-201ENST00000478069 331 ntBASIC3.16□□□□□ -1.9
C9orf72Q96LT7 RN7SL20P-201ENST00000488827 297 ntBASIC3.16□□□□□ -1.9
C9orf72Q96LT7 RNF138P1-201ENST00000502765 546 ntBASIC3.16□□□□□ -1.9
C9orf72Q96LT7 AC096576.3-201ENST00000505528 721 ntTSL 5 BASIC3.16□□□□□ -1.9
C9orf72Q96LT7 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC3.16□□□□□ -1.9
C9orf72Q96LT7 RN7SKP43-201ENST00000516173 320 ntBASIC3.16□□□□□ -1.9
C9orf72Q96LT7 AC008632.1-202ENST00000518605 452 ntTSL 3 BASIC3.16□□□□□ -1.9
C9orf72Q96LT7 AC023442.2-201ENST00000526455 270 ntTSL 3 BASIC3.16□□□□□ -1.9
C9orf72Q96LT7 AC109635.4-202ENST00000531666 412 ntBASIC3.16□□□□□ -1.9
C9orf72Q96LT7 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC3.16□□□□□ -1.9
C9orf72Q96LT7 ATP5F1P7-201ENST00000567330 760 ntBASIC3.16□□□□□ -1.9
C9orf72Q96LT7 INTS6-AS1-210ENST00000595424 301 ntTSL 5 BASIC3.16□□□□□ -1.9
C9orf72Q96LT7 BNIP3P19-201ENST00000605397 577 ntBASIC3.16□□□□□ -1.9
C9orf72Q96LT7 HSPE1P14-201ENST00000605812 302 ntBASIC3.16□□□□□ -1.9
C9orf72Q96LT7 AC073569.3-201ENST00000619055 682 ntBASIC3.16□□□□□ -1.9
C9orf72Q96LT7 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
C9orf72Q96LT7 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC3.16□□□□□ -1.9
C9orf72Q96LT7 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC3.16□□□□□ -1.9
C9orf72Q96LT7 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.16□□□□□ -1.9
C9orf72Q96LT7 SAGE4P-201ENST00000442271 3381 ntBASIC3.16□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 88.8 ms