Protein–RNA interactions for Protein: Q96LD4

TRIM47, Tripartite motif-containing protein 47, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47Q96LD4 TDRD5-202ENST00000367614 3632 ntAPPRIS P3 TSL 2 BASIC6.53□□□□□ -1.36
TRIM47Q96LD4 HDAC9-203ENST00000406072 4102 ntTSL 5 BASIC6.53□□□□□ -1.36
TRIM47Q96LD4 ZC3H12C-201ENST00000278590 8807 ntTSL 2 BASIC6.53□□□□□ -1.36
TRIM47Q96LD4 IFI16-204ENST00000368131 2734 ntAPPRIS P3 TSL 1 (best) BASIC6.53□□□□□ -1.36
TRIM47Q96LD4 ADGRF5-201ENST00000265417 5668 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
TRIM47Q96LD4 STAG2-202ENST00000371144 4281 ntAPPRIS P3 TSL 1 (best) BASIC6.52□□□□□ -1.37
TRIM47Q96LD4 CEACAM1-201ENST00000161559 3519 ntAPPRIS P3 TSL 1 (best) BASIC6.52□□□□□ -1.37
TRIM47Q96LD4 TOPBP1-201ENST00000260810 5378 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
TRIM47Q96LD4 TOR1AIP1-202ENST00000435319 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC6.52□□□□□ -1.37
TRIM47Q96LD4 CFAP57-204ENST00000528956 3037 ntTSL 2 BASIC6.52□□□□□ -1.37
TRIM47Q96LD4 Y_RNA.39-201ENST00000362620 98 ntBASIC6.52□□□□□ -1.37
TRIM47Q96LD4 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC6.52□□□□□ -1.37
TRIM47Q96LD4 AL353608.2-201ENST00000425587 340 ntTSL 5 BASIC6.52□□□□□ -1.37
TRIM47Q96LD4 CLEC5A-203ENST00000439991 501 ntTSL 3 BASIC6.52□□□□□ -1.37
TRIM47Q96LD4 IGKV1OR-3-201ENST00000446944 348 ntBASIC6.52□□□□□ -1.37
TRIM47Q96LD4 AC243772.1-201ENST00000451620 410 ntBASIC6.52□□□□□ -1.37
TRIM47Q96LD4 RPS23P3-201ENST00000470993 430 ntBASIC6.52□□□□□ -1.37
TRIM47Q96LD4 BX284632.1-201ENST00000478218 541 ntBASIC6.52□□□□□ -1.37
TRIM47Q96LD4 OR51K1P-201ENST00000510214 950 ntBASIC6.52□□□□□ -1.37
TRIM47Q96LD4 MIR2117-201ENST00000516780 80 ntBASIC6.52□□□□□ -1.37
TRIM47Q96LD4 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC6.52□□□□□ -1.37
TRIM47Q96LD4 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC6.52□□□□□ -1.37
TRIM47Q96LD4 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC6.52□□□□□ -1.37
TRIM47Q96LD4 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC6.52□□□□□ -1.37
TRIM47Q96LD4 AC006254.3-201ENST00000603353 884 ntBASIC6.52□□□□□ -1.37
TRIM47Q96LD4 MZT1P2-201ENST00000604387 248 ntBASIC6.52□□□□□ -1.37
TRIM47Q96LD4 AL391813.2-201ENST00000609113 322 ntBASIC6.52□□□□□ -1.37
TRIM47Q96LD4 Z82243.1-201ENST00000609432 473 ntBASIC6.52□□□□□ -1.37
TRIM47Q96LD4 AC026634.1-201ENST00000634369 198 ntBASIC6.52□□□□□ -1.37
TRIM47Q96LD4 AC008703.1-201ENST00000637629 1174 ntTSL 5 BASIC6.52□□□□□ -1.37
TRIM47Q96LD4 HMMR-204ENST00000432118 2084 ntAPPRIS ALT2 TSL 2 BASIC6.52□□□□□ -1.37
TRIM47Q96LD4 AC027287.1-201ENST00000553115 1453 ntBASIC6.52□□□□□ -1.37
TRIM47Q96LD4 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
TRIM47Q96LD4 KIN-201ENST00000379562 6348 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
TRIM47Q96LD4 BMPR1APS1-201ENST00000403332 1598 ntBASIC6.52□□□□□ -1.37
TRIM47Q96LD4 ZFYVE9-202ENST00000357206 4567 ntAPPRIS ALT1 TSL 1 (best) BASIC6.52□□□□□ -1.37
TRIM47Q96LD4 CASC15-206ENST00000606851 1889 ntTSL 2 BASIC6.51□□□□□ -1.37
TRIM47Q96LD4 SYNJ2BP-201ENST00000256366 7015 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
TRIM47Q96LD4 CBX5-201ENST00000209875 11528 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
TRIM47Q96LD4 DDX18P4-201ENST00000511690 1966 ntBASIC6.51□□□□□ -1.37
TRIM47Q96LD4 NOL8-214ENST00000535387 3390 ntAPPRIS ALT2 TSL 5 BASIC6.51□□□□□ -1.37
TRIM47Q96LD4 DROSHA-212ENST00000511367 5305 ntAPPRIS P4 TSL 1 (best) BASIC6.51□□□□□ -1.37
TRIM47Q96LD4 TPTE2P4-201ENST00000258589 1605 ntBASIC6.51□□□□□ -1.37
TRIM47Q96LD4 MFSD8-219ENST00000641228 2559 ntBASIC6.51□□□□□ -1.37
TRIM47Q96LD4 SLCO1A2-212ENST00000458504 2008 ntTSL 2 BASIC6.51□□□□□ -1.37
TRIM47Q96LD4 Y_RNA.64-201ENST00000362845 102 ntBASIC6.51□□□□□ -1.37
TRIM47Q96LD4 Y_RNA.122-201ENST00000363331 96 ntBASIC6.51□□□□□ -1.37
TRIM47Q96LD4 Y_RNA.214-201ENST00000364201 112 ntBASIC6.51□□□□□ -1.37
TRIM47Q96LD4 Y_RNA.276-201ENST00000364732 109 ntBASIC6.51□□□□□ -1.37
TRIM47Q96LD4 Y_RNA.367-201ENST00000365544 101 ntBASIC6.51□□□□□ -1.37
TRIM47Q96LD4 RNA5SP30-201ENST00000365552 115 ntBASIC6.51□□□□□ -1.37
TRIM47Q96LD4 RNU6-1117P-201ENST00000384525 104 ntBASIC6.51□□□□□ -1.37
TRIM47Q96LD4 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
TRIM47Q96LD4 AL391417.1-201ENST00000404100 426 ntBASIC6.51□□□□□ -1.37
TRIM47Q96LD4 RBMY1KP-201ENST00000423480 476 ntBASIC6.51□□□□□ -1.37
TRIM47Q96LD4 AC007327.2-201ENST00000440788 457 ntTSL 3 BASIC6.51□□□□□ -1.37
TRIM47Q96LD4 RPS3AP41-201ENST00000462701 778 ntBASIC6.51□□□□□ -1.37
TRIM47Q96LD4 RPL7L1P8-201ENST00000469911 741 ntBASIC6.51□□□□□ -1.37
TRIM47Q96LD4 RNU6ATAC24P-201ENST00000516811 135 ntBASIC6.51□□□□□ -1.37
TRIM47Q96LD4 Y_RNA.708-201ENST00000516950 96 ntBASIC6.51□□□□□ -1.37
TRIM47Q96LD4 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC6.51□□□□□ -1.37
TRIM47Q96LD4 AC090136.1-201ENST00000520009 240 ntBASIC6.51□□□□□ -1.37
TRIM47Q96LD4 TRPT1-216ENST00000546133 382 ntTSL 2 BASIC6.51□□□□□ -1.37
TRIM47Q96LD4 PWRN4-201ENST00000563016 420 ntTSL 5 BASIC6.51□□□□□ -1.37
TRIM47Q96LD4 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC6.51□□□□□ -1.37
TRIM47Q96LD4 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC6.51□□□□□ -1.37
TRIM47Q96LD4 AC060780.2-201ENST00000589047 198 ntBASIC6.51□□□□□ -1.37
TRIM47Q96LD4 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC6.51□□□□□ -1.37
TRIM47Q96LD4 AL008729.2-201ENST00000606393 473 ntBASIC6.51□□□□□ -1.37
TRIM47Q96LD4 AC000068.2-201ENST00000608816 460 ntBASIC6.51□□□□□ -1.37
TRIM47Q96LD4 U2.14-201ENST00000615943 113 ntBASIC6.51□□□□□ -1.37
TRIM47Q96LD4 CR381572.1-201ENST00000625098 102 ntBASIC6.51□□□□□ -1.37
TRIM47Q96LD4 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
TRIM47Q96LD4 DHX32-201ENST00000284690 3070 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
TRIM47Q96LD4 FILIP1L-201ENST00000331335 4219 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
TRIM47Q96LD4 AC121333.1-201ENST00000567488 2709 ntBASIC6.51□□□□□ -1.37
TRIM47Q96LD4 LINC01963-201ENST00000562038 3148 ntBASIC6.51□□□□□ -1.37
TRIM47Q96LD4 AC138907.8-201ENST00000623981 2256 ntBASIC6.51□□□□□ -1.37
TRIM47Q96LD4 HEPHL1-201ENST00000315765 5345 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
TRIM47Q96LD4 PDE4D-216ENST00000507116 3350 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
TRIM47Q96LD4 GAPVD1-206ENST00000394104 6737 ntTSL 2 BASIC6.5□□□□□ -1.37
TRIM47Q96LD4 CLSPN-202ENST00000318121 4169 ntAPPRIS P3 TSL 1 (best) BASIC6.5□□□□□ -1.37
TRIM47Q96LD4 ZNF480-204ENST00000490272 2238 ntTSL 2 BASIC6.5□□□□□ -1.37
TRIM47Q96LD4 ZNF418-212ENST00000616958 2212 ntAPPRIS P3 TSL 1 (best) BASIC6.5□□□□□ -1.37
TRIM47Q96LD4 CA1-225ENST00000626824 2405 ntTSL 5 BASIC6.5□□□□□ -1.37
TRIM47Q96LD4 SDAD1-203ENST00000395711 2513 ntTSL 2 BASIC6.5□□□□□ -1.37
TRIM47Q96LD4 AC093297.3-201ENST00000607056 2517 ntBASIC6.5□□□□□ -1.37
TRIM47Q96LD4 FYB1-204ENST00000505428 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC6.5□□□□□ -1.37
TRIM47Q96LD4 PEX26-201ENST00000329627 18445 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
TRIM47Q96LD4 DOCK4-AS1-201ENST00000452714 2494 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
TRIM47Q96LD4 GTDC1-201ENST00000241391 2356 ntTSL 2 BASIC6.5□□□□□ -1.37
TRIM47Q96LD4 TM4SF20-201ENST00000304568 2296 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
TRIM47Q96LD4 ABI2-204ENST00000295851 22209 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
TRIM47Q96LD4 AL606516.1-201ENST00000455438 1861 ntTSL 2 BASIC6.5□□□□□ -1.37
TRIM47Q96LD4 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
TRIM47Q96LD4 CLHC1-203ENST00000406076 1777 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
TRIM47Q96LD4 IPCEF1-202ENST00000367220 1658 ntAPPRIS ALT2 TSL 2 BASIC6.5□□□□□ -1.37
TRIM47Q96LD4 SNORD116-11-201ENST00000383882 92 ntBASIC6.5□□□□□ -1.37
TRIM47Q96LD4 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC6.5□□□□□ -1.37
TRIM47Q96LD4 MIR548H3-201ENST00000408771 118 ntBASIC6.5□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 118.1 ms