Protein–RNA interactions for Protein: Q96KN3

PKNOX2, Homeobox protein PKNOX2, humanhuman

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX2Q96KN3 AC046144.1-201ENST00000478559 1853 ntBASIC3.56□□□□□ -1.84
PKNOX2Q96KN3 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
PKNOX2Q96KN3 AC032011.1-201ENST00000611703 1549 ntBASIC3.56□□□□□ -1.84
PKNOX2Q96KN3 MTND4P8-201ENST00000514997 1362 ntBASIC3.56□□□□□ -1.84
PKNOX2Q96KN3 SET-203ENST00000372688 801 ntTSL 2 BASIC3.56□□□□□ -1.84
PKNOX2Q96KN3 DEFB127-201ENST00000382388 514 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
PKNOX2Q96KN3 RNU6-883P-201ENST00000384597 107 ntBASIC3.56□□□□□ -1.84
PKNOX2Q96KN3 MIR524-201ENST00000385242 87 ntBASIC3.56□□□□□ -1.84
PKNOX2Q96KN3 RPL7P60-201ENST00000397636 735 ntBASIC3.56□□□□□ -1.84
PKNOX2Q96KN3 AL590004.2-201ENST00000404787 371 ntBASIC3.56□□□□□ -1.84
PKNOX2Q96KN3 LINC01347-201ENST00000417964 355 ntBASIC3.56□□□□□ -1.84
PKNOX2Q96KN3 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC3.56□□□□□ -1.84
PKNOX2Q96KN3 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC3.56□□□□□ -1.84
PKNOX2Q96KN3 AC245028.1-201ENST00000423259 256 ntBASIC3.56□□□□□ -1.84
PKNOX2Q96KN3 AL139327.2-202ENST00000437057 400 ntTSL 3 BASIC3.56□□□□□ -1.84
PKNOX2Q96KN3 AC019330.1-202ENST00000440609 504 ntTSL 4 BASIC3.56□□□□□ -1.84
PKNOX2Q96KN3 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC3.56□□□□□ -1.84
PKNOX2Q96KN3 AL589963.1-201ENST00000449282 727 ntTSL 3 BASIC3.56□□□□□ -1.84
PKNOX2Q96KN3 SNAP25-AS1-204ENST00000451151 867 ntTSL 2 BASIC3.56□□□□□ -1.84
PKNOX2Q96KN3 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC3.56□□□□□ -1.84
PKNOX2Q96KN3 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC3.56□□□□□ -1.84
PKNOX2Q96KN3 LNCSRLR-201ENST00000490375 709 ntTSL 3 BASIC3.56□□□□□ -1.84
PKNOX2Q96KN3 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC3.56□□□□□ -1.84
PKNOX2Q96KN3 IGLV3-17-201ENST00000519099 244 ntBASIC3.56□□□□□ -1.84
PKNOX2Q96KN3 SUB1P1-201ENST00000524415 382 ntBASIC3.56□□□□□ -1.84
PKNOX2Q96KN3 AC104009.1-203ENST00000531304 571 ntTSL 4 BASIC3.56□□□□□ -1.84
PKNOX2Q96KN3 AC025884.1-201ENST00000556034 378 ntBASIC3.56□□□□□ -1.84
PKNOX2Q96KN3 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC3.56□□□□□ -1.84
PKNOX2Q96KN3 ETFRF1-208ENST00000556402 874 ntTSL 3 BASIC3.56□□□□□ -1.84
PKNOX2Q96KN3 MYL12BP1-201ENST00000569826 507 ntBASIC3.56□□□□□ -1.84
PKNOX2Q96KN3 AL591034.3-201ENST00000605511 685 ntBASIC3.56□□□□□ -1.84
PKNOX2Q96KN3 AL513477.2-201ENST00000607858 568 ntBASIC3.56□□□□□ -1.84
PKNOX2Q96KN3 AC013468.1-201ENST00000608680 598 ntBASIC3.56□□□□□ -1.84
PKNOX2Q96KN3 SNORD39.4-201ENST00000620099 78 ntBASIC3.56□□□□□ -1.84
PKNOX2Q96KN3 AC068620.4-201ENST00000636730 1182 ntBASIC3.56□□□□□ -1.84
PKNOX2Q96KN3 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.56□□□□□ -1.84
PKNOX2Q96KN3 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
PKNOX2Q96KN3 AC010680.1-201ENST00000590024 3590 ntBASIC3.55□□□□□ -1.84
PKNOX2Q96KN3 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.55□□□□□ -1.84
PKNOX2Q96KN3 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
PKNOX2Q96KN3 OR6C4-201ENST00000394256 1046 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
PKNOX2Q96KN3 RPS15AP38-201ENST00000413110 372 ntBASIC3.55□□□□□ -1.84
PKNOX2Q96KN3 RPL18P10-201ENST00000425606 538 ntBASIC3.55□□□□□ -1.84
PKNOX2Q96KN3 AL138789.1-201ENST00000425820 960 ntTSL 2 BASIC3.55□□□□□ -1.84
PKNOX2Q96KN3 OR4K11P-201ENST00000431829 904 ntBASIC3.55□□□□□ -1.84
PKNOX2Q96KN3 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
PKNOX2Q96KN3 AC024084.1-201ENST00000440744 455 ntTSL 5 BASIC3.55□□□□□ -1.84
PKNOX2Q96KN3 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC3.55□□□□□ -1.84
PKNOX2Q96KN3 AC097262.1-201ENST00000452559 548 ntBASIC3.55□□□□□ -1.84
PKNOX2Q96KN3 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC3.55□□□□□ -1.84
PKNOX2Q96KN3 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC3.55□□□□□ -1.84
PKNOX2Q96KN3 AC025181.1-201ENST00000477507 416 ntBASIC3.55□□□□□ -1.84
PKNOX2Q96KN3 AC093663.2-201ENST00000484625 313 ntBASIC3.55□□□□□ -1.84
PKNOX2Q96KN3 RN7SL323P-201ENST00000494712 295 ntBASIC3.55□□□□□ -1.84
PKNOX2Q96KN3 AC112204.2-201ENST00000503269 374 ntTSL 2 BASIC3.55□□□□□ -1.84
PKNOX2Q96KN3 AC010273.1-201ENST00000504129 946 ntTSL 5 BASIC3.55□□□□□ -1.84
PKNOX2Q96KN3 LINC02272-202ENST00000511399 607 ntTSL 2 BASIC3.55□□□□□ -1.84
PKNOX2Q96KN3 TBCA-206ENST00000518338 551 ntTSL 2 BASIC3.55□□□□□ -1.84
PKNOX2Q96KN3 PTK2-220ENST00000520151 573 ntTSL 4 BASIC3.55□□□□□ -1.84
PKNOX2Q96KN3 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC3.55□□□□□ -1.84
PKNOX2Q96KN3 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC3.55□□□□□ -1.84
PKNOX2Q96KN3 AC106028.2-201ENST00000555325 464 ntTSL 4 BASIC3.55□□□□□ -1.84
PKNOX2Q96KN3 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC3.55□□□□□ -1.84
PKNOX2Q96KN3 AC090666.1-201ENST00000578241 445 ntBASIC3.55□□□□□ -1.84
PKNOX2Q96KN3 MIR3609-201ENST00000582661 80 ntBASIC3.55□□□□□ -1.84
PKNOX2Q96KN3 VN1R78P-201ENST00000597393 564 ntBASIC3.55□□□□□ -1.84
PKNOX2Q96KN3 RNU1-30P-201ENST00000606575 163 ntBASIC3.55□□□□□ -1.84
PKNOX2Q96KN3 AC011374.2-201ENST00000607135 526 ntBASIC3.55□□□□□ -1.84
PKNOX2Q96KN3 AL161629.2-201ENST00000615347 275 ntBASIC3.55□□□□□ -1.84
PKNOX2Q96KN3 AC104307.1-201ENST00000616142 196 ntBASIC3.55□□□□□ -1.84
PKNOX2Q96KN3 CRYM-AS1-204ENST00000637983 556 ntBASIC3.55□□□□□ -1.84
PKNOX2Q96KN3 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC3.55□□□□□ -1.84
PKNOX2Q96KN3 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
PKNOX2Q96KN3 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC3.54□□□□□ -1.84
PKNOX2Q96KN3 AL121657.1-201ENST00000327215 531 ntBASIC3.54□□□□□ -1.84
PKNOX2Q96KN3 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
PKNOX2Q96KN3 RNU6-213P-201ENST00000384051 104 ntBASIC3.54□□□□□ -1.84
PKNOX2Q96KN3 MIR142-201ENST00000384835 87 ntBASIC3.54□□□□□ -1.84
PKNOX2Q96KN3 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
PKNOX2Q96KN3 NPM1P10-201ENST00000398310 865 ntBASIC3.54□□□□□ -1.84
PKNOX2Q96KN3 TAF9BP2-201ENST00000400856 499 ntBASIC3.54□□□□□ -1.84
PKNOX2Q96KN3 AL022722.2-201ENST00000402519 180 ntBASIC3.54□□□□□ -1.84
PKNOX2Q96KN3 RSL24D1P1-201ENST00000404972 493 ntBASIC3.54□□□□□ -1.84
PKNOX2Q96KN3 MOB4-205ENST00000409916 829 ntTSL 3 BASIC3.54□□□□□ -1.84
PKNOX2Q96KN3 AL356320.2-201ENST00000417263 507 ntBASIC3.54□□□□□ -1.84
PKNOX2Q96KN3 CR769775.2-201ENST00000417850 891 ntTSL 3 BASIC3.54□□□□□ -1.84
PKNOX2Q96KN3 AC245054.1-201ENST00000420944 258 ntBASIC3.54□□□□□ -1.84
PKNOX2Q96KN3 AL139247.1-201ENST00000422768 325 ntBASIC3.54□□□□□ -1.84
PKNOX2Q96KN3 AC114973.1-201ENST00000429057 632 ntBASIC3.54□□□□□ -1.84
PKNOX2Q96KN3 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
PKNOX2Q96KN3 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC3.54□□□□□ -1.84
PKNOX2Q96KN3 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC3.54□□□□□ -1.84
PKNOX2Q96KN3 HMGB3P11-201ENST00000440127 604 ntBASIC3.54□□□□□ -1.84
PKNOX2Q96KN3 AC097499.1-201ENST00000444277 208 ntBASIC3.54□□□□□ -1.84
PKNOX2Q96KN3 CNTN4-AS2-201ENST00000447256 426 ntTSL 3 BASIC3.54□□□□□ -1.84
PKNOX2Q96KN3 RPL23AP15-201ENST00000450202 459 ntBASIC3.54□□□□□ -1.84
PKNOX2Q96KN3 AL109741.2-201ENST00000455561 343 ntBASIC3.54□□□□□ -1.84
PKNOX2Q96KN3 CABYRP1-201ENST00000465493 1045 ntBASIC3.54□□□□□ -1.84
PKNOX2Q96KN3 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
PKNOX2Q96KN3 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC3.54□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 125.1 ms