Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 AC007619.2-201ENST00000605743 379 ntBASIC6.64□□□□□ -1.35
LRCH3Q96II8 AL022394.1-201ENST00000606979 292 ntBASIC6.64□□□□□ -1.35
LRCH3Q96II8 AL365222.1-201ENST00000614661 98 ntBASIC6.64□□□□□ -1.35
LRCH3Q96II8 U6.106-201ENST00000636360 105 ntBASIC6.64□□□□□ -1.35
LRCH3Q96II8 OR3A3-203ENST00000641141 3800 ntAPPRIS P1 BASIC6.64□□□□□ -1.35
LRCH3Q96II8 SEPT7-203ENST00000399035 4066 ntAPPRIS ALT1 TSL 5 BASIC6.64□□□□□ -1.35
LRCH3Q96II8 EEF1A1P36-201ENST00000427807 1351 ntBASIC6.64□□□□□ -1.35
LRCH3Q96II8 MIPOL1-201ENST00000327441 7185 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
LRCH3Q96II8 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC6.64□□□□□ -1.35
LRCH3Q96II8 CEP120-202ENST00000306481 4629 ntTSL 5 BASIC6.64□□□□□ -1.35
LRCH3Q96II8 NDUFS1-201ENST00000233190 11819 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
LRCH3Q96II8 LCP1-201ENST00000323076 3787 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
LRCH3Q96II8 ADNP-202ENST00000371602 6115 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
LRCH3Q96II8 AL359195.2-201ENST00000623657 4412 ntBASIC6.64□□□□□ -1.35
LRCH3Q96II8 IARS-213ENST00000627121 4587 ntTSL 5 BASIC6.64□□□□□ -1.35
LRCH3Q96II8 CHRM5-201ENST00000383263 5410 ntAPPRIS P1 TSL 2 BASIC6.63□□□□□ -1.35
LRCH3Q96II8 ENPP3-203ENST00000414305 3418 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
LRCH3Q96II8 MOSPD2-201ENST00000380492 4163 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
LRCH3Q96II8 MGAM-202ENST00000475668 9172 ntAPPRIS P1 TSL 5 BASIC6.63□□□□□ -1.35
LRCH3Q96II8 DMD-211ENST00000378707 7410 ntTSL 5 BASIC6.63□□□□□ -1.35
LRCH3Q96II8 C11orf72-201ENST00000333139 2431 ntTSL 2 BASIC6.63□□□□□ -1.35
LRCH3Q96II8 LRRFIP2-201ENST00000336686 3208 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
LRCH3Q96II8 SLAIN1-204ENST00000358679 2075 ntAPPRIS P3 TSL 2 BASIC6.63□□□□□ -1.35
LRCH3Q96II8 RNU6-215P-201ENST00000365169 102 ntBASIC6.63□□□□□ -1.35
LRCH3Q96II8 SPRR2B-201ENST00000368755 617 ntAPPRIS P1 BASIC6.63□□□□□ -1.35
LRCH3Q96II8 RNU6-946P-201ENST00000383878 107 ntBASIC6.63□□□□□ -1.35
LRCH3Q96II8 RNU6ATAC15P-201ENST00000408279 121 ntBASIC6.63□□□□□ -1.35
LRCH3Q96II8 U3.39-201ENST00000408569 239 ntBASIC6.63□□□□□ -1.35
LRCH3Q96II8 RNA5SP111-201ENST00000411386 101 ntBASIC6.63□□□□□ -1.35
LRCH3Q96II8 BMS1P22-201ENST00000414726 313 ntBASIC6.63□□□□□ -1.35
LRCH3Q96II8 TTTY17A-201ENST00000416110 166 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
LRCH3Q96II8 TTTY17C-201ENST00000421387 166 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
LRCH3Q96II8 AL354824.1-201ENST00000424931 349 ntTSL 3 BASIC6.63□□□□□ -1.35
LRCH3Q96II8 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC6.63□□□□□ -1.35
LRCH3Q96II8 AC092423.1-201ENST00000430165 186 ntBASIC6.63□□□□□ -1.35
LRCH3Q96II8 LINC02528-202ENST00000434437 535 ntTSL 2 BASIC6.63□□□□□ -1.35
LRCH3Q96II8 LRRC36-202ENST00000435835 1765 ntTSL 2 BASIC6.63□□□□□ -1.35
LRCH3Q96II8 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC6.63□□□□□ -1.35
LRCH3Q96II8 TTTY17B-201ENST00000441906 166 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
LRCH3Q96II8 RPL23AP64-201ENST00000469465 435 ntBASIC6.63□□□□□ -1.35
LRCH3Q96II8 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC6.63□□□□□ -1.35
LRCH3Q96II8 AP000926.1-201ENST00000479573 241 ntBASIC6.63□□□□□ -1.35
LRCH3Q96II8 SEPT14P8-201ENST00000508026 178 ntBASIC6.63□□□□□ -1.35
LRCH3Q96II8 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC6.63□□□□□ -1.35
LRCH3Q96II8 AC034238.3-201ENST00000512349 591 ntTSL 4 BASIC6.63□□□□□ -1.35
LRCH3Q96II8 SNORA43.3-201ENST00000517240 103 ntBASIC6.63□□□□□ -1.35
LRCH3Q96II8 AP001972.1-201ENST00000529215 506 ntTSL 2 BASIC6.63□□□□□ -1.35
LRCH3Q96II8 AC018552.1-201ENST00000562099 811 ntBASIC6.63□□□□□ -1.35
LRCH3Q96II8 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
LRCH3Q96II8 AC093278.2-201ENST00000564956 2485 ntBASIC6.63□□□□□ -1.35
LRCH3Q96II8 ZNF320-205ENST00000595635 6448 ntAPPRIS P1 TSL 2 BASIC6.63□□□□□ -1.35
LRCH3Q96II8 AC009643.2-201ENST00000603543 1448 ntBASIC6.63□□□□□ -1.35
LRCH3Q96II8 AC005618.1-201ENST00000606901 3148 ntBASIC6.63□□□□□ -1.35
LRCH3Q96II8 AL590099.1-201ENST00000615276 138 ntBASIC6.63□□□□□ -1.35
LRCH3Q96II8 AC123768.4-201ENST00000616244 701 ntBASIC6.63□□□□□ -1.35
LRCH3Q96II8 NADK2-211ENST00000617628 744 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
LRCH3Q96II8 AC120057.5-201ENST00000623840 154 ntBASIC6.63□□□□□ -1.35
LRCH3Q96II8 CU639417.4-201ENST00000623928 207 ntBASIC6.63□□□□□ -1.35
LRCH3Q96II8 OR52N1-202ENST00000641645 2545 ntAPPRIS P1 BASIC6.63□□□□□ -1.35
LRCH3Q96II8 RPGRIP1L-205ENST00000563746 4193 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
LRCH3Q96II8 METTL15-201ENST00000303459 4068 ntTSL 2 BASIC6.63□□□□□ -1.35
LRCH3Q96II8 CLCN3-211ENST00000613795 5874 ntTSL 5 BASIC6.63□□□□□ -1.35
LRCH3Q96II8 TNPO1P2-201ENST00000426249 2665 ntBASIC6.63□□□□□ -1.35
LRCH3Q96II8 CPED1-201ENST00000310396 5340 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
LRCH3Q96II8 ARHGAP32-201ENST00000310343 10111 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
LRCH3Q96II8 TRAPPC11-209ENST00000512476 2546 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
LRCH3Q96II8 GABRB2-201ENST00000274547 7409 ntTSL 5 BASIC6.62□□□□□ -1.35
LRCH3Q96II8 NBPF9-206ENST00000613969 4624 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
LRCH3Q96II8 ZNF571-203ENST00000451802 2265 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
LRCH3Q96II8 IRF6-201ENST00000367021 4306 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
LRCH3Q96II8 CFAP57-208ENST00000610710 4162 ntTSL 5 BASIC6.62□□□□□ -1.35
LRCH3Q96II8 DOCK9-216ENST00000627024 4096 ntTSL 2 BASIC6.62□□□□□ -1.35
LRCH3Q96II8 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
LRCH3Q96II8 AC025470.1-201ENST00000510053 2032 ntBASIC6.62□□□□□ -1.35
LRCH3Q96II8 ZNF615-204ENST00000594083 4020 ntAPPRIS ALT2 TSL 1 (best) BASIC6.62□□□□□ -1.35
LRCH3Q96II8 TLR10-201ENST00000308973 3958 ntAPPRIS P1 TSL 5 BASIC6.62□□□□□ -1.35
LRCH3Q96II8 RLIMP1-201ENST00000339626 1680 ntBASIC6.62□□□□□ -1.35
LRCH3Q96II8 BICRAL-202ENST00000394168 6515 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
LRCH3Q96II8 FAM13A-AS1-201ENST00000500765 3210 ntTSL 2 BASIC6.62□□□□□ -1.35
LRCH3Q96II8 NABP1-204ENST00000410026 11521 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
LRCH3Q96II8 RNA5SP375-201ENST00000362975 119 ntBASIC6.62□□□□□ -1.35
LRCH3Q96II8 Y_RNA.418-201ENST00000384029 102 ntBASIC6.62□□□□□ -1.35
LRCH3Q96II8 RNU6-44P-201ENST00000384045 107 ntBASIC6.62□□□□□ -1.35
LRCH3Q96II8 TRGV5-201ENST00000390344 552 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
LRCH3Q96II8 SNORA69.1-201ENST00000390904 137 ntBASIC6.62□□□□□ -1.35
LRCH3Q96II8 RPS29P13-201ENST00000402041 169 ntBASIC6.62□□□□□ -1.35
LRCH3Q96II8 RNU4-78P-201ENST00000410940 126 ntBASIC6.62□□□□□ -1.35
LRCH3Q96II8 AC137630.2-202ENST00000429681 555 ntTSL 3 BASIC6.62□□□□□ -1.35
LRCH3Q96II8 HMGB3P24-201ENST00000433260 622 ntBASIC6.62□□□□□ -1.35
LRCH3Q96II8 DAP3P1-201ENST00000441522 278 ntBASIC6.62□□□□□ -1.35
LRCH3Q96II8 RN7SL72P-201ENST00000460697 269 ntBASIC6.62□□□□□ -1.35
LRCH3Q96II8 CREM-230ENST00000474931 626 ntTSL 2 BASIC6.62□□□□□ -1.35
LRCH3Q96II8 RPL21P103-201ENST00000479921 488 ntBASIC6.62□□□□□ -1.35
LRCH3Q96II8 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
LRCH3Q96II8 AP002754.2-201ENST00000542121 462 ntTSL 5 BASIC6.62□□□□□ -1.35
LRCH3Q96II8 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC6.62□□□□□ -1.35
LRCH3Q96II8 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC6.62□□□□□ -1.35
LRCH3Q96II8 MRPL57P1-201ENST00000621486 265 ntBASIC6.62□□□□□ -1.35
LRCH3Q96II8 CCDC80-201ENST00000206423 12430 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
LRCH3Q96II8 IARS-202ENST00000375643 4656 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 80.7 ms