Protein–RNA interactions for Protein: Q96GC9

VMP1, Vacuole membrane protein 1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1Q96GC9 NANOGP10-201ENST00000453325 895 ntBASIC3.76□□□□□ -1.81
VMP1Q96GC9 MTCO3P16-201ENST00000454456 754 ntBASIC3.76□□□□□ -1.81
VMP1Q96GC9 RNA5SP310-201ENST00000459084 116 ntBASIC3.76□□□□□ -1.81
VMP1Q96GC9 RPL23AP14-201ENST00000468281 468 ntBASIC3.76□□□□□ -1.81
VMP1Q96GC9 AC108734.3-201ENST00000481241 1165 ntBASIC3.76□□□□□ -1.81
VMP1Q96GC9 RN7SL271P-201ENST00000487601 295 ntBASIC3.76□□□□□ -1.81
VMP1Q96GC9 RNU6-1225P-201ENST00000516336 65 ntBASIC3.76□□□□□ -1.81
VMP1Q96GC9 AC010376.1-201ENST00000522101 334 ntBASIC3.76□□□□□ -1.81
VMP1Q96GC9 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC3.76□□□□□ -1.81
VMP1Q96GC9 AP003102.1-201ENST00000525638 661 ntBASIC3.76□□□□□ -1.81
VMP1Q96GC9 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC3.76□□□□□ -1.81
VMP1Q96GC9 AC091516.1-201ENST00000549191 703 ntBASIC3.76□□□□□ -1.81
VMP1Q96GC9 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC3.76□□□□□ -1.81
VMP1Q96GC9 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC3.76□□□□□ -1.81
VMP1Q96GC9 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC3.76□□□□□ -1.81
VMP1Q96GC9 MIR4286-201ENST00000580651 93 ntBASIC3.76□□□□□ -1.81
VMP1Q96GC9 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC3.76□□□□□ -1.81
VMP1Q96GC9 AL606834.3-201ENST00000602615 496 ntBASIC3.76□□□□□ -1.81
VMP1Q96GC9 AC009220.3-201ENST00000604318 586 ntBASIC3.76□□□□□ -1.81
VMP1Q96GC9 MIR6868-201ENST00000611215 58 ntBASIC3.76□□□□□ -1.81
VMP1Q96GC9 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC3.76□□□□□ -1.81
VMP1Q96GC9 OR1S1-201ENST00000624470 978 ntBASIC3.76□□□□□ -1.81
VMP1Q96GC9 MIR1322-201ENST00000638013 71 ntBASIC3.76□□□□□ -1.81
VMP1Q96GC9 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
VMP1Q96GC9 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC3.76□□□□□ -1.81
VMP1Q96GC9 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC3.76□□□□□ -1.81
VMP1Q96GC9 AC090740.1-201ENST00000623193 2262 ntBASIC3.75□□□□□ -1.81
VMP1Q96GC9 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC3.75□□□□□ -1.81
VMP1Q96GC9 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.75□□□□□ -1.81
VMP1Q96GC9 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC3.75□□□□□ -1.81
VMP1Q96GC9 RNU1-101P-201ENST00000391171 127 ntBASIC3.75□□□□□ -1.81
VMP1Q96GC9 SAR1AP2-201ENST00000392696 594 ntBASIC3.75□□□□□ -1.81
VMP1Q96GC9 AL354719.1-201ENST00000406535 843 ntBASIC3.75□□□□□ -1.81
VMP1Q96GC9 RPL7P44-201ENST00000424827 742 ntBASIC3.75□□□□□ -1.81
VMP1Q96GC9 DPPA2P1-201ENST00000428060 556 ntBASIC3.75□□□□□ -1.81
VMP1Q96GC9 AL590233.1-201ENST00000430017 456 ntBASIC3.75□□□□□ -1.81
VMP1Q96GC9 LINC00366-201ENST00000441430 435 ntTSL 2 BASIC3.75□□□□□ -1.81
VMP1Q96GC9 TXNP1-201ENST00000441872 371 ntBASIC3.75□□□□□ -1.81
VMP1Q96GC9 HSPE1P28-201ENST00000443139 211 ntBASIC3.75□□□□□ -1.81
VMP1Q96GC9 HMGB3P6-201ENST00000444896 598 ntBASIC3.75□□□□□ -1.81
VMP1Q96GC9 RPL36AP33-201ENST00000450395 310 ntBASIC3.75□□□□□ -1.81
VMP1Q96GC9 AC005297.2-201ENST00000450430 606 ntBASIC3.75□□□□□ -1.81
VMP1Q96GC9 MTCO3P11-201ENST00000455103 774 ntBASIC3.75□□□□□ -1.81
VMP1Q96GC9 AC090453.1-201ENST00000495560 436 ntBASIC3.75□□□□□ -1.81
VMP1Q96GC9 AC097480.1-201ENST00000509416 712 ntTSL 3 BASIC3.75□□□□□ -1.81
VMP1Q96GC9 FTH1P21-201ENST00000512179 511 ntBASIC3.75□□□□□ -1.81
VMP1Q96GC9 HSPA8P13-201ENST00000523715 472 ntBASIC3.75□□□□□ -1.81
VMP1Q96GC9 OR5AK1P-201ENST00000524837 922 ntBASIC3.75□□□□□ -1.81
VMP1Q96GC9 AC118942.1-201ENST00000529674 1035 ntBASIC3.75□□□□□ -1.81
VMP1Q96GC9 AC084824.1-201ENST00000550917 1005 ntBASIC3.75□□□□□ -1.81
VMP1Q96GC9 FRMD6-AS2-202ENST00000557625 581 ntTSL 4 BASIC3.75□□□□□ -1.81
VMP1Q96GC9 BNIP3P5-201ENST00000562290 498 ntBASIC3.75□□□□□ -1.81
VMP1Q96GC9 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC3.75□□□□□ -1.81
VMP1Q96GC9 MAGOH2P-202ENST00000584384 429 ntBASIC3.75□□□□□ -1.81
VMP1Q96GC9 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.75□□□□□ -1.81
VMP1Q96GC9 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.75□□□□□ -1.81
VMP1Q96GC9 AL022067.1-201ENST00000602426 454 ntBASIC3.75□□□□□ -1.81
VMP1Q96GC9 AL020997.2-201ENST00000602607 184 ntBASIC3.75□□□□□ -1.81
VMP1Q96GC9 AC104662.1-201ENST00000604448 511 ntBASIC3.75□□□□□ -1.81
VMP1Q96GC9 AC009570.1-201ENST00000609599 745 ntBASIC3.75□□□□□ -1.81
VMP1Q96GC9 AC024257.5-201ENST00000612739 531 ntBASIC3.75□□□□□ -1.81
VMP1Q96GC9 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC3.75□□□□□ -1.81
VMP1Q96GC9 AC010872.1-201ENST00000624225 675 ntBASIC3.75□□□□□ -1.81
VMP1Q96GC9 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC3.75□□□□□ -1.81
VMP1Q96GC9 CUL1P1-201ENST00000509510 2425 ntBASIC3.75□□□□□ -1.81
VMP1Q96GC9 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.74□□□□□ -1.81
VMP1Q96GC9 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
VMP1Q96GC9 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
VMP1Q96GC9 C11orf40-201ENST00000307616 654 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
VMP1Q96GC9 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
VMP1Q96GC9 RNU6-882P-201ENST00000391025 103 ntBASIC3.74□□□□□ -1.81
VMP1Q96GC9 ATP5F1P4-201ENST00000397288 746 ntBASIC3.74□□□□□ -1.81
VMP1Q96GC9 AL356131.1-201ENST00000405826 414 ntBASIC3.74□□□□□ -1.81
VMP1Q96GC9 MIR1251-201ENST00000408552 70 ntBASIC3.74□□□□□ -1.81
VMP1Q96GC9 MTATP6P27-201ENST00000416987 621 ntBASIC3.74□□□□□ -1.81
VMP1Q96GC9 Z75741.2-201ENST00000417272 1167 ntBASIC3.74□□□□□ -1.81
VMP1Q96GC9 OFD1P11Y-201ENST00000418213 1177 ntBASIC3.74□□□□□ -1.81
VMP1Q96GC9 BEND7P1-201ENST00000422058 457 ntBASIC3.74□□□□□ -1.81
VMP1Q96GC9 OR8F1P-201ENST00000425243 930 ntBASIC3.74□□□□□ -1.81
VMP1Q96GC9 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC3.74□□□□□ -1.81
VMP1Q96GC9 AC005208.1-201ENST00000435112 599 ntTSL 3 BASIC3.74□□□□□ -1.81
VMP1Q96GC9 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC3.74□□□□□ -1.81
VMP1Q96GC9 RAC1P7-201ENST00000445367 377 ntBASIC3.74□□□□□ -1.81
VMP1Q96GC9 AL500522.2-201ENST00000448562 343 ntBASIC3.74□□□□□ -1.81
VMP1Q96GC9 AC096554.1-201ENST00000458182 529 ntTSL 5 BASIC3.74□□□□□ -1.81
VMP1Q96GC9 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC3.74□□□□□ -1.81
VMP1Q96GC9 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
VMP1Q96GC9 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
VMP1Q96GC9 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC3.74□□□□□ -1.81
VMP1Q96GC9 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC3.74□□□□□ -1.81
VMP1Q96GC9 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC3.74□□□□□ -1.81
VMP1Q96GC9 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
VMP1Q96GC9 MGP-203ENST00000539261 1405 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
VMP1Q96GC9 REXO2-218ENST00000544827 880 ntTSL 3 BASIC3.74□□□□□ -1.81
VMP1Q96GC9 AC089983.1-201ENST00000549807 701 ntTSL 3 BASIC3.74□□□□□ -1.81
VMP1Q96GC9 AC010547.3-201ENST00000569271 440 ntTSL 2 BASIC3.74□□□□□ -1.81
VMP1Q96GC9 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC3.74□□□□□ -1.81
VMP1Q96GC9 AC096947.1-201ENST00000603233 470 ntBASIC3.74□□□□□ -1.81
VMP1Q96GC9 AP002907.1-201ENST00000606361 1430 ntBASIC3.74□□□□□ -1.81
VMP1Q96GC9 KLRF1-207ENST00000617793 1096 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 101.4 ms