Protein–RNA interactions for Protein: Q96FS4

SIPA1, Signal-induced proliferation-associated protein 1, humanhuman

Predictions only

Length 1,042 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1Q96FS4 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC3.84□□□□□ -1.79
SIPA1Q96FS4 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
SIPA1Q96FS4 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC3.84□□□□□ -1.79
SIPA1Q96FS4 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC3.84□□□□□ -1.79
SIPA1Q96FS4 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC3.84□□□□□ -1.79
SIPA1Q96FS4 AC011458.1-201ENST00000604034 617 ntBASIC3.84□□□□□ -1.79
SIPA1Q96FS4 AC012531.5-201ENST00000611375 151 ntBASIC3.84□□□□□ -1.79
SIPA1Q96FS4 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC3.84□□□□□ -1.79
SIPA1Q96FS4 FAM35DP-201ENST00000323387 2712 ntBASIC3.84□□□□□ -1.8
SIPA1Q96FS4 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.8
SIPA1Q96FS4 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC3.83□□□□□ -1.8
SIPA1Q96FS4 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
SIPA1Q96FS4 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
SIPA1Q96FS4 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
SIPA1Q96FS4 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC3.83□□□□□ -1.8
SIPA1Q96FS4 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
SIPA1Q96FS4 RNU4-68P-201ENST00000364314 141 ntBASIC3.83□□□□□ -1.8
SIPA1Q96FS4 TEX30-204ENST00000376027 1106 ntTSL 5 BASIC3.83□□□□□ -1.8
SIPA1Q96FS4 PGAP1-203ENST00000409188 1246 ntTSL 2 BASIC3.83□□□□□ -1.8
SIPA1Q96FS4 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC3.83□□□□□ -1.8
SIPA1Q96FS4 AC092447.6-201ENST00000414578 210 ntBASIC3.83□□□□□ -1.8
SIPA1Q96FS4 PSMA6P3-201ENST00000428242 164 ntBASIC3.83□□□□□ -1.8
SIPA1Q96FS4 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC3.83□□□□□ -1.8
SIPA1Q96FS4 EZH2P1-201ENST00000431167 291 ntBASIC3.83□□□□□ -1.8
SIPA1Q96FS4 HSPD1P21-201ENST00000436541 245 ntBASIC3.83□□□□□ -1.8
SIPA1Q96FS4 HMGB1P12-201ENST00000438594 598 ntBASIC3.83□□□□□ -1.8
SIPA1Q96FS4 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC3.83□□□□□ -1.8
SIPA1Q96FS4 AL360089.1-201ENST00000442260 436 ntTSL 5 BASIC3.83□□□□□ -1.8
SIPA1Q96FS4 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC3.83□□□□□ -1.8
SIPA1Q96FS4 PRSS3P4-201ENST00000453323 162 ntBASIC3.83□□□□□ -1.8
SIPA1Q96FS4 PTGES3P5-201ENST00000455109 434 ntBASIC3.83□□□□□ -1.8
SIPA1Q96FS4 CEACAMP4-201ENST00000457676 421 ntBASIC3.83□□□□□ -1.8
SIPA1Q96FS4 RPS4XP13-201ENST00000483219 789 ntBASIC3.83□□□□□ -1.8
SIPA1Q96FS4 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC3.83□□□□□ -1.8
SIPA1Q96FS4 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC3.83□□□□□ -1.8
SIPA1Q96FS4 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC3.83□□□□□ -1.8
SIPA1Q96FS4 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC3.83□□□□□ -1.8
SIPA1Q96FS4 RN7SKP18-201ENST00000516005 275 ntBASIC3.83□□□□□ -1.8
SIPA1Q96FS4 RN7SKP289-201ENST00000517244 295 ntBASIC3.83□□□□□ -1.8
SIPA1Q96FS4 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC3.83□□□□□ -1.8
SIPA1Q96FS4 AC087672.2-201ENST00000522498 429 ntTSL 2 BASIC3.83□□□□□ -1.8
SIPA1Q96FS4 AC007991.1-201ENST00000522680 631 ntBASIC3.83□□□□□ -1.8
SIPA1Q96FS4 HSPA8P13-201ENST00000523715 472 ntBASIC3.83□□□□□ -1.8
SIPA1Q96FS4 AC018630.1-201ENST00000541376 925 ntBASIC3.83□□□□□ -1.8
SIPA1Q96FS4 AC126177.3-201ENST00000551839 688 ntBASIC3.83□□□□□ -1.8
SIPA1Q96FS4 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC3.83□□□□□ -1.8
SIPA1Q96FS4 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC3.83□□□□□ -1.8
SIPA1Q96FS4 AC012669.1-201ENST00000603209 283 ntBASIC3.83□□□□□ -1.8
SIPA1Q96FS4 HMGB1P50-201ENST00000605814 607 ntBASIC3.83□□□□□ -1.8
SIPA1Q96FS4 AC011816.2-201ENST00000607089 556 ntBASIC3.83□□□□□ -1.8
SIPA1Q96FS4 AC016597.2-201ENST00000613256 341 ntBASIC3.83□□□□□ -1.8
SIPA1Q96FS4 RBM12B-AS1-201ENST00000623283 653 ntBASIC3.83□□□□□ -1.8
SIPA1Q96FS4 UGP2-231ENST00000627474 264 ntTSL 5 BASIC3.83□□□□□ -1.8
SIPA1Q96FS4 OR4G3P-201ENST00000633500 913 ntBASIC3.83□□□□□ -1.8
SIPA1Q96FS4 SLC10A5P1-201ENST00000379063 1306 ntBASIC3.83□□□□□ -1.8
SIPA1Q96FS4 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC3.83□□□□□ -1.8
SIPA1Q96FS4 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
SIPA1Q96FS4 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
SIPA1Q96FS4 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
SIPA1Q96FS4 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC3.82□□□□□ -1.8
SIPA1Q96FS4 AC097504.1-201ENST00000515103 2415 ntBASIC3.82□□□□□ -1.8
SIPA1Q96FS4 AC106754.1-201ENST00000562632 1513 ntBASIC3.82□□□□□ -1.8
SIPA1Q96FS4 ADAM18-206ENST00000520772 1429 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
SIPA1Q96FS4 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC3.82□□□□□ -1.8
SIPA1Q96FS4 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC3.82□□□□□ -1.8
SIPA1Q96FS4 PTP4A1P5-201ENST00000420305 455 ntBASIC3.82□□□□□ -1.8
SIPA1Q96FS4 AL049610.1-201ENST00000423374 372 ntBASIC3.82□□□□□ -1.8
SIPA1Q96FS4 NANOGP5-201ENST00000424456 877 ntBASIC3.82□□□□□ -1.8
SIPA1Q96FS4 AC092648.1-201ENST00000425870 423 ntBASIC3.82□□□□□ -1.8
SIPA1Q96FS4 USP9YP11-201ENST00000427537 717 ntBASIC3.82□□□□□ -1.8
SIPA1Q96FS4 USP9YP24-201ENST00000434374 697 ntBASIC3.82□□□□□ -1.8
SIPA1Q96FS4 USP9YP17-201ENST00000444617 696 ntBASIC3.82□□□□□ -1.8
SIPA1Q96FS4 SUN3-208ENST00000453192 801 ntTSL 5 BASIC3.82□□□□□ -1.8
SIPA1Q96FS4 OFD1P3Y-201ENST00000453312 783 ntBASIC3.82□□□□□ -1.8
SIPA1Q96FS4 SUMO2P2-201ENST00000456482 255 ntBASIC3.82□□□□□ -1.8
SIPA1Q96FS4 HMGN2P16-201ENST00000456802 261 ntBASIC3.82□□□□□ -1.8
SIPA1Q96FS4 RPL21P104-201ENST00000464143 478 ntBASIC3.82□□□□□ -1.8
SIPA1Q96FS4 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
SIPA1Q96FS4 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC3.82□□□□□ -1.8
SIPA1Q96FS4 AC006390.1-201ENST00000508068 283 ntBASIC3.82□□□□□ -1.8
SIPA1Q96FS4 LINC02465-202ENST00000508724 503 ntTSL 3 BASIC3.82□□□□□ -1.8
SIPA1Q96FS4 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC3.82□□□□□ -1.8
SIPA1Q96FS4 IGKV2D-23-201ENST00000518179 286 ntBASIC3.82□□□□□ -1.8
SIPA1Q96FS4 LINC02143-201ENST00000519929 520 ntTSL 3 BASIC3.82□□□□□ -1.8
SIPA1Q96FS4 AP003181.1-201ENST00000528811 445 ntTSL 3 BASIC3.82□□□□□ -1.8
SIPA1Q96FS4 MED6-207ENST00000554963 975 ntAPPRIS ALT1 TSL 5 BASIC3.82□□□□□ -1.8
SIPA1Q96FS4 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC3.82□□□□□ -1.8
SIPA1Q96FS4 AC006116.9-201ENST00000591630 649 ntTSL 5 BASIC3.82□□□□□ -1.8
SIPA1Q96FS4 AC245884.10-201ENST00000597355 337 ntBASIC3.82□□□□□ -1.8
SIPA1Q96FS4 SRGNP1-201ENST00000603392 451 ntBASIC3.82□□□□□ -1.8
SIPA1Q96FS4 MTND3P19-201ENST00000603825 345 ntBASIC3.82□□□□□ -1.8
SIPA1Q96FS4 U3.45-201ENST00000607547 219 ntBASIC3.82□□□□□ -1.8
SIPA1Q96FS4 AC080013.4-201ENST00000607624 649 ntBASIC3.82□□□□□ -1.8
SIPA1Q96FS4 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC3.82□□□□□ -1.8
SIPA1Q96FS4 MESTIT1_2.1-201ENST00000616328 235 ntBASIC3.82□□□□□ -1.8
SIPA1Q96FS4 OR8H2-202ENST00000618136 1038 ntAPPRIS ALT1 BASIC3.82□□□□□ -1.8
SIPA1Q96FS4 WASF3-AS1-206ENST00000626779 381 ntTSL 5 BASIC3.82□□□□□ -1.8
SIPA1Q96FS4 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC3.82□□□□□ -1.8
SIPA1Q96FS4 HSP90AA4P-202ENST00000506915 2228 ntBASIC3.82□□□□□ -1.8
SIPA1Q96FS4 AF127577.6-201ENST00000623352 2191 ntBASIC3.82□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 80.8 ms