Protein–RNA interactions for Protein: Q92547

TOPBP1, DNA topoisomerase 2-binding protein 1, humanhuman

Predictions only

Length 1,522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1Q92547 USP44-208ENST00000552440 1818 ntTSL 5 BASIC3.9□□□□□ -1.79
TOPBP1Q92547 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
TOPBP1Q92547 CSNK1G3-210ENST00000521364 2580 ntAPPRIS ALT2 TSL 2 BASIC3.9□□□□□ -1.79
TOPBP1Q92547 Z99496.1-201ENST00000469424 1477 ntBASIC3.9□□□□□ -1.79
TOPBP1Q92547 ARHGAP28-207ENST00000532996 1859 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
TOPBP1Q92547 AC093775.1-201ENST00000624154 1868 ntBASIC3.89□□□□□ -1.79
TOPBP1Q92547 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC3.89□□□□□ -1.79
TOPBP1Q92547 Y_RNA.338-201ENST00000365320 114 ntBASIC3.89□□□□□ -1.79
TOPBP1Q92547 SNORA79B-201ENST00000410557 148 ntBASIC3.89□□□□□ -1.79
TOPBP1Q92547 MTCO2P17-201ENST00000424336 677 ntBASIC3.89□□□□□ -1.79
TOPBP1Q92547 AL592045.1-201ENST00000429867 352 ntBASIC3.89□□□□□ -1.79
TOPBP1Q92547 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC3.89□□□□□ -1.79
TOPBP1Q92547 RPS27P29-201ENST00000463110 252 ntBASIC3.89□□□□□ -1.79
TOPBP1Q92547 AC147055.1-201ENST00000509261 750 ntBASIC3.89□□□□□ -1.79
TOPBP1Q92547 AC117834.1-202ENST00000521203 561 ntTSL 4 BASIC3.89□□□□□ -1.79
TOPBP1Q92547 AP001207.1-201ENST00000524051 481 ntBASIC3.89□□□□□ -1.79
TOPBP1Q92547 MEG8-218ENST00000556720 456 ntTSL 3 BASIC3.89□□□□□ -1.79
TOPBP1Q92547 AC007610.2-201ENST00000566770 666 ntTSL 3 BASIC3.89□□□□□ -1.79
TOPBP1Q92547 MIR4498-201ENST00000577599 66 ntBASIC3.89□□□□□ -1.79
TOPBP1Q92547 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
TOPBP1Q92547 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC3.88□□□□□ -1.79
TOPBP1Q92547 Y_RNA.164-201ENST00000363709 102 ntBASIC3.88□□□□□ -1.79
TOPBP1Q92547 AL356806.1-201ENST00000422524 916 ntBASIC3.88□□□□□ -1.79
TOPBP1Q92547 SETP10-201ENST00000424368 814 ntBASIC3.88□□□□□ -1.79
TOPBP1Q92547 AL109761.1-201ENST00000428689 422 ntTSL 3 BASIC3.88□□□□□ -1.79
TOPBP1Q92547 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
TOPBP1Q92547 MAL2-205ENST00000521048 575 ntTSL 4 BASIC3.88□□□□□ -1.79
TOPBP1Q92547 AC025281.1-201ENST00000567026 265 ntBASIC3.88□□□□□ -1.79
TOPBP1Q92547 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC3.88□□□□□ -1.79
TOPBP1Q92547 AC011460.1-201ENST00000636268 1834 ntBASIC3.88□□□□□ -1.79
TOPBP1Q92547 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC3.88□□□□□ -1.79
TOPBP1Q92547 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.88□□□□□ -1.79
TOPBP1Q92547 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.87□□□□□ -1.79
TOPBP1Q92547 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC3.87□□□□□ -1.79
TOPBP1Q92547 SNORA68.2-201ENST00000391263 128 ntBASIC3.87□□□□□ -1.79
TOPBP1Q92547 AC010745.4-201ENST00000420130 740 ntTSL 5 BASIC3.87□□□□□ -1.79
TOPBP1Q92547 MTCYBP20-201ENST00000524239 1129 ntBASIC3.87□□□□□ -1.79
TOPBP1Q92547 LINC02448-201ENST00000548613 583 ntTSL 2 BASIC3.87□□□□□ -1.79
TOPBP1Q92547 TP73-AS1.1-201ENST00000611447 161 ntBASIC3.87□□□□□ -1.79
TOPBP1Q92547 MIR7153-201ENST00000637758 57 ntBASIC3.87□□□□□ -1.79
TOPBP1Q92547 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
TOPBP1Q92547 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
TOPBP1Q92547 AC080128.1-201ENST00000474389 1917 ntBASIC3.87□□□□□ -1.79
TOPBP1Q92547 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.86□□□□□ -1.79
TOPBP1Q92547 Y_RNA.118-201ENST00000363300 101 ntBASIC3.86□□□□□ -1.79
TOPBP1Q92547 SNORA41-201ENST00000384675 132 ntBASIC3.86□□□□□ -1.79
TOPBP1Q92547 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC3.86□□□□□ -1.79
TOPBP1Q92547 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC3.86□□□□□ -1.79
TOPBP1Q92547 AP004247.3-201ENST00000608682 624 ntBASIC3.86□□□□□ -1.79
TOPBP1Q92547 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
TOPBP1Q92547 GABPAP-201ENST00000419271 1356 ntBASIC3.86□□□□□ -1.79
TOPBP1Q92547 SAR1A-201ENST00000373236 437 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
TOPBP1Q92547 NRG4-201ENST00000394907 1159 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
TOPBP1Q92547 Y_RNA.595-201ENST00000410403 105 ntBASIC3.85□□□□□ -1.79
TOPBP1Q92547 PTP4A1P7-201ENST00000423476 514 ntBASIC3.85□□□□□ -1.79
TOPBP1Q92547 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC3.85□□□□□ -1.79
TOPBP1Q92547 AC007677.1-201ENST00000445757 515 ntBASIC3.85□□□□□ -1.79
TOPBP1Q92547 RN7SKP210-201ENST00000459176 261 ntBASIC3.85□□□□□ -1.79
TOPBP1Q92547 NFU1-207ENST00000462320 558 ntTSL 4 BASIC3.85□□□□□ -1.79
TOPBP1Q92547 AC011037.1-201ENST00000483964 558 ntBASIC3.85□□□□□ -1.79
TOPBP1Q92547 AC021393.1-201ENST00000531077 433 ntTSL 3 BASIC3.85□□□□□ -1.79
TOPBP1Q92547 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC3.85□□□□□ -1.79
TOPBP1Q92547 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
TOPBP1Q92547 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
TOPBP1Q92547 CLECL1-201ENST00000327839 670 ntAPPRIS P3 TSL 1 (best) BASIC3.85□□□□□ -1.79
TOPBP1Q92547 RNU2-2P-201ENST00000410396 191 ntBASIC3.85□□□□□ -1.79
TOPBP1Q92547 AC092427.1-202ENST00000430569 476 ntBASIC3.85□□□□□ -1.79
TOPBP1Q92547 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC3.85□□□□□ -1.79
TOPBP1Q92547 LINC01828-201ENST00000445514 531 ntTSL 4 BASIC3.85□□□□□ -1.79
TOPBP1Q92547 AC008696.2-201ENST00000503323 825 ntTSL 3 BASIC3.85□□□□□ -1.79
TOPBP1Q92547 RNU6-295P-201ENST00000516901 104 ntBASIC3.85□□□□□ -1.79
TOPBP1Q92547 OR7K1P-201ENST00000546439 926 ntBASIC3.85□□□□□ -1.79
TOPBP1Q92547 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC3.85□□□□□ -1.79
TOPBP1Q92547 AC135628.1-201ENST00000568867 534 ntBASIC3.85□□□□□ -1.79
TOPBP1Q92547 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC3.85□□□□□ -1.79
TOPBP1Q92547 AC103710.3-201ENST00000608157 948 ntBASIC3.85□□□□□ -1.79
TOPBP1Q92547 U2.15-201ENST00000611544 191 ntBASIC3.85□□□□□ -1.79
TOPBP1Q92547 DAOA-AS1_1.1-201ENST00000613021 201 ntBASIC3.85□□□□□ -1.79
TOPBP1Q92547 U2.16-201ENST00000613119 191 ntBASIC3.85□□□□□ -1.79
TOPBP1Q92547 U2.12-201ENST00000613778 191 ntBASIC3.85□□□□□ -1.79
TOPBP1Q92547 U2.20-201ENST00000613956 192 ntBASIC3.85□□□□□ -1.79
TOPBP1Q92547 U2.9-201ENST00000615427 191 ntBASIC3.85□□□□□ -1.79
TOPBP1Q92547 U2.11-201ENST00000616345 191 ntBASIC3.85□□□□□ -1.79
TOPBP1Q92547 U2.2-201ENST00000616535 191 ntBASIC3.85□□□□□ -1.79
TOPBP1Q92547 AC131238.1-201ENST00000617135 328 ntBASIC3.85□□□□□ -1.79
TOPBP1Q92547 U2.3-201ENST00000617785 191 ntBASIC3.85□□□□□ -1.79
TOPBP1Q92547 U2.19-201ENST00000618602 191 ntBASIC3.85□□□□□ -1.79
TOPBP1Q92547 RNU2-1-201ENST00000618664 191 ntBASIC3.85□□□□□ -1.79
TOPBP1Q92547 U2.6-201ENST00000619225 191 ntBASIC3.85□□□□□ -1.79
TOPBP1Q92547 U2.5-201ENST00000619465 191 ntBASIC3.85□□□□□ -1.79
TOPBP1Q92547 U2.10-201ENST00000620268 191 ntBASIC3.85□□□□□ -1.79
TOPBP1Q92547 ATP8A2P2-201ENST00000437678 1568 ntBASIC3.84□□□□□ -1.79
TOPBP1Q92547 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
TOPBP1Q92547 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
TOPBP1Q92547 OR5M3-201ENST00000312240 1051 ntAPPRIS P1 BASIC3.84□□□□□ -1.8
TOPBP1Q92547 SNORA17.3-201ENST00000391159 129 ntBASIC3.84□□□□□ -1.8
TOPBP1Q92547 AL035604.1-201ENST00000416481 531 ntTSL 3 BASIC3.84□□□□□ -1.8
TOPBP1Q92547 ERMN-209ENST00000420719 1246 ntTSL 2 BASIC3.84□□□□□ -1.8
TOPBP1Q92547 AL606490.7-201ENST00000433136 191 ntBASIC3.84□□□□□ -1.8
TOPBP1Q92547 MTND5P28-201ENST00000438005 1594 ntBASIC3.84□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 117.8 ms