Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 AC092691.3-201ENST00000482766 510 ntTSL 3 BASIC4□□□□□ -1.77
SNED1Q8TER0 AC092924.1-201ENST00000496084 487 ntTSL 4 BASIC4□□□□□ -1.77
SNED1Q8TER0 RPL21P131-201ENST00000497298 483 ntBASIC4□□□□□ -1.77
SNED1Q8TER0 HMGB1P3-201ENST00000502802 616 ntBASIC4□□□□□ -1.77
SNED1Q8TER0 APOOP4-201ENST00000513530 597 ntBASIC4□□□□□ -1.77
SNED1Q8TER0 LINC02353-201ENST00000515181 849 ntTSL 1 (best) BASIC4□□□□□ -1.77
SNED1Q8TER0 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC4□□□□□ -1.77
SNED1Q8TER0 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC4□□□□□ -1.77
SNED1Q8TER0 AL590385.2-201ENST00000537821 553 ntTSL 5 BASIC4□□□□□ -1.77
SNED1Q8TER0 LYZ-203ENST00000549690 669 ntTSL 2 BASIC4□□□□□ -1.77
SNED1Q8TER0 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC4□□□□□ -1.77
SNED1Q8TER0 MIR3162-201ENST00000581818 82 ntBASIC4□□□□□ -1.77
SNED1Q8TER0 AC121247.2-201ENST00000604776 136 ntBASIC4□□□□□ -1.77
SNED1Q8TER0 AL133507.1-201ENST00000605269 557 ntBASIC4□□□□□ -1.77
SNED1Q8TER0 AC018638.7-201ENST00000605836 1114 ntBASIC4□□□□□ -1.77
SNED1Q8TER0 AC116312.1-201ENST00000606841 314 ntBASIC4□□□□□ -1.77
SNED1Q8TER0 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC4□□□□□ -1.77
SNED1Q8TER0 AC018692.3-201ENST00000623929 123 ntBASIC4□□□□□ -1.77
SNED1Q8TER0 MTND4P10-201ENST00000446199 1363 ntBASIC4□□□□□ -1.77
SNED1Q8TER0 TAS2R20-201ENST00000538986 1381 ntAPPRIS P1 BASIC4□□□□□ -1.77
SNED1Q8TER0 TTC41P-203ENST00000548527 1475 ntTSL 5 BASIC4□□□□□ -1.77
SNED1Q8TER0 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
SNED1Q8TER0 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC4□□□□□ -1.77
SNED1Q8TER0 FAM35DP-201ENST00000323387 2712 ntBASIC4□□□□□ -1.77
SNED1Q8TER0 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC4□□□□□ -1.77
SNED1Q8TER0 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
SNED1Q8TER0 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC4□□□□□ -1.77
SNED1Q8TER0 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
SNED1Q8TER0 AC006504.1-201ENST00000562493 3666 ntBASIC3.99□□□□□ -1.77
SNED1Q8TER0 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
SNED1Q8TER0 ASB17-201ENST00000284142 1107 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
SNED1Q8TER0 RNU6-1214P-201ENST00000363650 109 ntBASIC3.99□□□□□ -1.77
SNED1Q8TER0 RNU4-68P-201ENST00000364314 141 ntBASIC3.99□□□□□ -1.77
SNED1Q8TER0 RNU6-31P-201ENST00000384388 108 ntBASIC3.99□□□□□ -1.77
SNED1Q8TER0 SNORD116-4-201ENST00000384733 96 ntBASIC3.99□□□□□ -1.77
SNED1Q8TER0 TATDN1P1-201ENST00000414123 891 ntBASIC3.99□□□□□ -1.77
SNED1Q8TER0 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC3.99□□□□□ -1.77
SNED1Q8TER0 DEFB130D-201ENST00000426866 237 ntBASIC3.99□□□□□ -1.77
SNED1Q8TER0 AL589823.1-201ENST00000429577 183 ntBASIC3.99□□□□□ -1.77
SNED1Q8TER0 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC3.99□□□□□ -1.77
SNED1Q8TER0 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC3.99□□□□□ -1.77
SNED1Q8TER0 LINC01967-202ENST00000437506 515 ntTSL 5 BASIC3.99□□□□□ -1.77
SNED1Q8TER0 CLEC5A-202ENST00000438351 743 ntTSL 3 BASIC3.99□□□□□ -1.77
SNED1Q8TER0 CHODL-AS1-201ENST00000447175 1117 ntTSL 2 BASIC3.99□□□□□ -1.77
SNED1Q8TER0 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC3.99□□□□□ -1.77
SNED1Q8TER0 AL133217.1-201ENST00000450980 425 ntBASIC3.99□□□□□ -1.77
SNED1Q8TER0 RPL23AP23-201ENST00000452590 471 ntBASIC3.99□□□□□ -1.77
SNED1Q8TER0 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC3.99□□□□□ -1.77
SNED1Q8TER0 AC093722.1-201ENST00000504882 489 ntTSL 3 BASIC3.99□□□□□ -1.77
SNED1Q8TER0 NPY1R-204ENST00000509586 1017 ntTSL 2 BASIC3.99□□□□□ -1.77
SNED1Q8TER0 AC093770.1-201ENST00000511559 571 ntBASIC3.99□□□□□ -1.77
SNED1Q8TER0 AC093752.1-206ENST00000511823 336 ntBASIC3.99□□□□□ -1.77
SNED1Q8TER0 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC3.99□□□□□ -1.77
SNED1Q8TER0 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC3.99□□□□□ -1.77
SNED1Q8TER0 RNA5SP356-201ENST00000515972 94 ntBASIC3.99□□□□□ -1.77
SNED1Q8TER0 RNU6-1308P-201ENST00000516817 103 ntBASIC3.99□□□□□ -1.77
SNED1Q8TER0 AC025437.2-201ENST00000518103 548 ntTSL 4 BASIC3.99□□□□□ -1.77
SNED1Q8TER0 NARSP2-201ENST00000518524 679 ntBASIC3.99□□□□□ -1.77
SNED1Q8TER0 AC022790.1-201ENST00000522872 204 ntBASIC3.99□□□□□ -1.77
SNED1Q8TER0 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
SNED1Q8TER0 RRAS2-205ENST00000529237 1278 ntTSL 2 BASIC3.99□□□□□ -1.77
SNED1Q8TER0 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC3.99□□□□□ -1.77
SNED1Q8TER0 AL133330.2-201ENST00000532760 776 ntTSL 2 BASIC3.99□□□□□ -1.77
SNED1Q8TER0 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC3.99□□□□□ -1.77
SNED1Q8TER0 AC091563.1-202ENST00000574086 522 ntTSL 5 BASIC3.99□□□□□ -1.77
SNED1Q8TER0 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC3.99□□□□□ -1.77
SNED1Q8TER0 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC3.99□□□□□ -1.77
SNED1Q8TER0 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.99□□□□□ -1.77
SNED1Q8TER0 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC3.99□□□□□ -1.77
SNED1Q8TER0 IGHV3-29-201ENST00000604817 344 ntBASIC3.99□□□□□ -1.77
SNED1Q8TER0 AL355816.1-201ENST00000607951 118 ntBASIC3.99□□□□□ -1.77
SNED1Q8TER0 AP006248.2-201ENST00000623309 592 ntBASIC3.99□□□□□ -1.77
SNED1Q8TER0 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
SNED1Q8TER0 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC3.99□□□□□ -1.77
SNED1Q8TER0 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.99□□□□□ -1.77
SNED1Q8TER0 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC3.98□□□□□ -1.77
SNED1Q8TER0 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
SNED1Q8TER0 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
SNED1Q8TER0 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC3.98□□□□□ -1.77
SNED1Q8TER0 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.98□□□□□ -1.77
SNED1Q8TER0 C8orf22-201ENST00000303202 1499 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
SNED1Q8TER0 ZNF876P-202ENST00000398732 1485 ntBASIC3.98□□□□□ -1.77
SNED1Q8TER0 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC3.98□□□□□ -1.77
SNED1Q8TER0 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC3.98□□□□□ -1.77
SNED1Q8TER0 HOMER1-201ENST00000282260 774 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
SNED1Q8TER0 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC3.98□□□□□ -1.77
SNED1Q8TER0 RNU6-301P-201ENST00000384277 107 ntBASIC3.98□□□□□ -1.77
SNED1Q8TER0 Y_RNA.599-201ENST00000410489 109 ntBASIC3.98□□□□□ -1.77
SNED1Q8TER0 AL603910.1-201ENST00000423099 370 ntTSL 3 BASIC3.98□□□□□ -1.77
SNED1Q8TER0 PRKG1-AS1-202ENST00000426785 1111 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
SNED1Q8TER0 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC3.98□□□□□ -1.77
SNED1Q8TER0 AL160175.1-201ENST00000428124 247 ntBASIC3.98□□□□□ -1.77
SNED1Q8TER0 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC3.98□□□□□ -1.77
SNED1Q8TER0 AC245517.2-201ENST00000442890 346 ntBASIC3.98□□□□□ -1.77
SNED1Q8TER0 AC016903.1-201ENST00000444017 588 ntTSL 4 BASIC3.98□□□□□ -1.77
SNED1Q8TER0 AC004924.1-201ENST00000480160 781 ntBASIC3.98□□□□□ -1.77
SNED1Q8TER0 RPL21P47-201ENST00000483696 477 ntBASIC3.98□□□□□ -1.77
SNED1Q8TER0 RPS3AP22-201ENST00000488297 769 ntBASIC3.98□□□□□ -1.77
SNED1Q8TER0 AC117532.1-201ENST00000514638 323 ntBASIC3.98□□□□□ -1.77
SNED1Q8TER0 RNU6-1004P-201ENST00000516584 111 ntBASIC3.98□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 81.7 ms