Protein–RNA interactions for Protein: Q8TB33

LINC01560, Putative uncharacterized protein encoded by LINC01560, humanhuman

Predictions only

Length 94 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01560Q8TB33 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC2.7□□□□□ -1.98
LINC01560Q8TB33 MIR4496-201ENST00000635896 61 ntBASIC2.7□□□□□ -1.98
LINC01560Q8TB33 MIR622-201ENST00000638396 96 ntBASIC2.7□□□□□ -1.98
LINC01560Q8TB33 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC2.7□□□□□ -1.98
LINC01560Q8TB33 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC2.7□□□□□ -1.98
LINC01560Q8TB33 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC2.69□□□□□ -1.98
LINC01560Q8TB33 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
LINC01560Q8TB33 SAGE4P-201ENST00000442271 3381 ntBASIC2.69□□□□□ -1.98
LINC01560Q8TB33 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
LINC01560Q8TB33 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC2.69□□□□□ -1.98
LINC01560Q8TB33 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC2.69□□□□□ -1.98
LINC01560Q8TB33 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
LINC01560Q8TB33 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
LINC01560Q8TB33 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC2.69□□□□□ -1.98
LINC01560Q8TB33 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC2.69□□□□□ -1.98
LINC01560Q8TB33 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC2.69□□□□□ -1.98
LINC01560Q8TB33 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
LINC01560Q8TB33 MIR30E-201ENST00000362104 92 ntBASIC2.69□□□□□ -1.98
LINC01560Q8TB33 RNU5B-1-201ENST00000363286 116 ntBASIC2.69□□□□□ -1.98
LINC01560Q8TB33 ZBTB8OS-202ENST00000373501 598 ntTSL 5 BASIC2.69□□□□□ -1.98
LINC01560Q8TB33 SNORA54-201ENST00000384281 123 ntBASIC2.69□□□□□ -1.98
LINC01560Q8TB33 TRBV24OR9-2-201ENST00000416632 435 ntBASIC2.69□□□□□ -1.98
LINC01560Q8TB33 AC092832.1-201ENST00000422934 400 ntBASIC2.69□□□□□ -1.98
LINC01560Q8TB33 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC2.69□□□□□ -1.98
LINC01560Q8TB33 RPP40P1-201ENST00000426762 456 ntBASIC2.69□□□□□ -1.98
LINC01560Q8TB33 PSMA2P3-201ENST00000429685 675 ntBASIC2.69□□□□□ -1.98
LINC01560Q8TB33 CKS1BP5-201ENST00000434172 273 ntBASIC2.69□□□□□ -1.98
LINC01560Q8TB33 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC2.69□□□□□ -1.98
LINC01560Q8TB33 AC234064.1-201ENST00000436312 247 ntBASIC2.69□□□□□ -1.98
LINC01560Q8TB33 HMGB3P11-201ENST00000440127 604 ntBASIC2.69□□□□□ -1.98
LINC01560Q8TB33 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC2.69□□□□□ -1.98
LINC01560Q8TB33 AC002542.1-201ENST00000440683 193 ntBASIC2.69□□□□□ -1.98
LINC01560Q8TB33 AC074327.1-201ENST00000448017 540 ntTSL 2 BASIC2.69□□□□□ -1.98
LINC01560Q8TB33 ZBTB8OS-205ENST00000465588 548 ntTSL 2 BASIC2.69□□□□□ -1.98
LINC01560Q8TB33 XACT-201ENST00000468762 497 ntTSL 5 BASIC2.69□□□□□ -1.98
LINC01560Q8TB33 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC2.69□□□□□ -1.98
LINC01560Q8TB33 RPS17P11-201ENST00000474297 293 ntBASIC2.69□□□□□ -1.98
LINC01560Q8TB33 AC087879.1-201ENST00000474343 374 ntBASIC2.69□□□□□ -1.98
LINC01560Q8TB33 LINC00971-203ENST00000491849 452 ntTSL 3 BASIC2.69□□□□□ -1.98
LINC01560Q8TB33 SNX5P1-201ENST00000505757 1041 ntBASIC2.69□□□□□ -1.98
LINC01560Q8TB33 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC2.69□□□□□ -1.98
LINC01560Q8TB33 CASP1-212ENST00000531166 300 ntTSL 5 BASIC2.69□□□□□ -1.98
LINC01560Q8TB33 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC2.69□□□□□ -1.98
LINC01560Q8TB33 OR6C68-201ENST00000548615 939 ntAPPRIS P1 BASIC2.69□□□□□ -1.98
LINC01560Q8TB33 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC2.69□□□□□ -1.98
LINC01560Q8TB33 CYP2C60P-201ENST00000566088 139 ntBASIC2.69□□□□□ -1.98
LINC01560Q8TB33 BPTFP1-201ENST00000579209 492 ntBASIC2.69□□□□□ -1.98
LINC01560Q8TB33 HSPE1P14-201ENST00000605812 302 ntBASIC2.69□□□□□ -1.98
LINC01560Q8TB33 RNA5SP108-201ENST00000605921 117 ntBASIC2.69□□□□□ -1.98
LINC01560Q8TB33 AC253576.2-201ENST00000618815 580 ntBASIC2.69□□□□□ -1.98
LINC01560Q8TB33 AP000943.4-201ENST00000622912 357 ntBASIC2.69□□□□□ -1.98
LINC01560Q8TB33 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC2.69□□□□□ -1.98
LINC01560Q8TB33 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC2.69□□□□□ -1.98
LINC01560Q8TB33 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
LINC01560Q8TB33 ELL2P4-201ENST00000446870 1376 ntBASIC2.69□□□□□ -1.98
LINC01560Q8TB33 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
LINC01560Q8TB33 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
LINC01560Q8TB33 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC2.69□□□□□ -1.98
LINC01560Q8TB33 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC2.68□□□□□ -1.98
LINC01560Q8TB33 SGO1P1-201ENST00000603525 1447 ntBASIC2.68□□□□□ -1.98
LINC01560Q8TB33 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC2.68□□□□□ -1.98
LINC01560Q8TB33 OR1L1-201ENST00000309623 933 ntAPPRIS P1 BASIC2.68□□□□□ -1.98
LINC01560Q8TB33 RNU6-619P-201ENST00000365146 108 ntBASIC2.68□□□□□ -1.98
LINC01560Q8TB33 OR1L1-202ENST00000373686 1083 ntBASIC2.68□□□□□ -1.98
LINC01560Q8TB33 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC2.68□□□□□ -1.98
LINC01560Q8TB33 RNU6-444P-201ENST00000383988 108 ntBASIC2.68□□□□□ -1.98
LINC01560Q8TB33 RNU6-356P-201ENST00000384140 107 ntBASIC2.68□□□□□ -1.98
LINC01560Q8TB33 MIR16-1-201ENST00000385271 89 ntBASIC2.68□□□□□ -1.98
LINC01560Q8TB33 AC110754.1-201ENST00000399740 601 ntBASIC2.68□□□□□ -1.98
LINC01560Q8TB33 SFR1P1-201ENST00000403720 688 ntBASIC2.68□□□□□ -1.98
LINC01560Q8TB33 AL355615.1-201ENST00000406187 641 ntBASIC2.68□□□□□ -1.98
LINC01560Q8TB33 AC073264.1-201ENST00000411508 416 ntBASIC2.68□□□□□ -1.98
LINC01560Q8TB33 AC006007.1-201ENST00000422084 672 ntTSL 2 BASIC2.68□□□□□ -1.98
LINC01560Q8TB33 AC002075.2-201ENST00000425207 252 ntBASIC2.68□□□□□ -1.98
LINC01560Q8TB33 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC2.68□□□□□ -1.98
LINC01560Q8TB33 RPS7P2-201ENST00000435134 607 ntBASIC2.68□□□□□ -1.98
LINC01560Q8TB33 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC2.68□□□□□ -1.98
LINC01560Q8TB33 AL591848.2-201ENST00000442712 522 ntTSL 3 BASIC2.68□□□□□ -1.98
LINC01560Q8TB33 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC2.68□□□□□ -1.98
LINC01560Q8TB33 SEPT14P24-201ENST00000447236 180 ntBASIC2.68□□□□□ -1.98
LINC01560Q8TB33 HMGN2P21-201ENST00000447764 270 ntBASIC2.68□□□□□ -1.98
LINC01560Q8TB33 Z99127.3-201ENST00000448158 395 ntBASIC2.68□□□□□ -1.98
LINC01560Q8TB33 AL589963.1-201ENST00000449282 727 ntTSL 3 BASIC2.68□□□□□ -1.98
LINC01560Q8TB33 AC112492.1-201ENST00000449607 712 ntBASIC2.68□□□□□ -1.98
LINC01560Q8TB33 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC2.68□□□□□ -1.98
LINC01560Q8TB33 AC009158.1-205ENST00000452511 895 ntTSL 3 BASIC2.68□□□□□ -1.98
LINC01560Q8TB33 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC2.68□□□□□ -1.98
LINC01560Q8TB33 NF1P3-201ENST00000457709 450 ntBASIC2.68□□□□□ -1.98
LINC01560Q8TB33 AP000873.1-201ENST00000463987 400 ntBASIC2.68□□□□□ -1.98
LINC01560Q8TB33 AC146507.1-201ENST00000468335 354 ntBASIC2.68□□□□□ -1.98
LINC01560Q8TB33 AC068724.1-201ENST00000487100 792 ntBASIC2.68□□□□□ -1.98
LINC01560Q8TB33 OR2A20P-203ENST00000498397 1268 ntBASIC2.68□□□□□ -1.98
LINC01560Q8TB33 AC093801.2-201ENST00000503966 1050 ntBASIC2.68□□□□□ -1.98
LINC01560Q8TB33 AC011352.3-201ENST00000505162 593 ntBASIC2.68□□□□□ -1.98
LINC01560Q8TB33 ZCCHC10-207ENST00000509437 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC2.68□□□□□ -1.98
LINC01560Q8TB33 ZNF131-215ENST00000509931 970 ntTSL 2 BASIC2.68□□□□□ -1.98
LINC01560Q8TB33 AC119751.1-201ENST00000513357 765 ntBASIC2.68□□□□□ -1.98
LINC01560Q8TB33 AC090802.1-201ENST00000520870 445 ntTSL 2 BASIC2.68□□□□□ -1.98
LINC01560Q8TB33 AC011008.1-201ENST00000522026 439 ntTSL 3 BASIC2.68□□□□□ -1.98
LINC01560Q8TB33 AP003066.2-201ENST00000529375 555 ntBASIC2.68□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 111.1 ms