Protein–RNA interactions for Protein: Q8NI28

LINC01006, Putative uncharacterized protein encoded by LINC01006, humanhuman

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01006Q8NI28 PCNP-208ENST00000627393 136 ntTSL 2 BASIC2.89□□□□□ -1.95
LINC01006Q8NI28 AP000553.6-201ENST00000641242 118 ntBASIC2.89□□□□□ -1.95
LINC01006Q8NI28 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC2.89□□□□□ -1.95
LINC01006Q8NI28 AC117529.2-201ENST00000512159 2068 ntBASIC2.89□□□□□ -1.95
LINC01006Q8NI28 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC2.89□□□□□ -1.95
LINC01006Q8NI28 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC2.89□□□□□ -1.95
LINC01006Q8NI28 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
LINC01006Q8NI28 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC2.89□□□□□ -1.95
LINC01006Q8NI28 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC2.89□□□□□ -1.95
LINC01006Q8NI28 TAS2R30-201ENST00000539585 1687 ntAPPRIS P1 BASIC2.88□□□□□ -1.95
LINC01006Q8NI28 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC2.88□□□□□ -1.95
LINC01006Q8NI28 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
LINC01006Q8NI28 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC2.88□□□□□ -1.95
LINC01006Q8NI28 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC2.88□□□□□ -1.95
LINC01006Q8NI28 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC2.88□□□□□ -1.95
LINC01006Q8NI28 AL049781.1-201ENST00000623195 3585 ntBASIC2.88□□□□□ -1.95
LINC01006Q8NI28 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC2.88□□□□□ -1.95
LINC01006Q8NI28 UBE3AP2-201ENST00000429033 2259 ntBASIC2.88□□□□□ -1.95
LINC01006Q8NI28 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
LINC01006Q8NI28 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC2.88□□□□□ -1.95
LINC01006Q8NI28 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC2.88□□□□□ -1.95
LINC01006Q8NI28 Y_RNA.25-201ENST00000362528 102 ntBASIC2.88□□□□□ -1.95
LINC01006Q8NI28 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC2.88□□□□□ -1.95
LINC01006Q8NI28 OR6C3-201ENST00000379667 936 ntAPPRIS P1 BASIC2.88□□□□□ -1.95
LINC01006Q8NI28 MIR513A2-201ENST00000385249 127 ntBASIC2.88□□□□□ -1.95
LINC01006Q8NI28 HSPD1P16-201ENST00000402302 394 ntBASIC2.88□□□□□ -1.95
LINC01006Q8NI28 ZNF603P-201ENST00000405613 487 ntBASIC2.88□□□□□ -1.95
LINC01006Q8NI28 RNU2-28P-201ENST00000410457 189 ntBASIC2.88□□□□□ -1.95
LINC01006Q8NI28 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC2.88□□□□□ -1.95
LINC01006Q8NI28 AC108681.1-202ENST00000417384 589 ntTSL 4 BASIC2.88□□□□□ -1.95
LINC01006Q8NI28 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC2.88□□□□□ -1.95
LINC01006Q8NI28 RPS15AP40-201ENST00000419621 391 ntBASIC2.88□□□□□ -1.95
LINC01006Q8NI28 USP9YP26-201ENST00000421008 661 ntBASIC2.88□□□□□ -1.95
LINC01006Q8NI28 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC2.88□□□□□ -1.95
LINC01006Q8NI28 UBE2V1P1-201ENST00000430836 445 ntBASIC2.88□□□□□ -1.95
LINC01006Q8NI28 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC2.88□□□□□ -1.95
LINC01006Q8NI28 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC2.88□□□□□ -1.95
LINC01006Q8NI28 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC2.88□□□□□ -1.95
LINC01006Q8NI28 AC241584.1-201ENST00000438469 1241 ntBASIC2.88□□□□□ -1.95
LINC01006Q8NI28 AL109741.2-201ENST00000455561 343 ntBASIC2.88□□□□□ -1.95
LINC01006Q8NI28 RPL37P6-202ENST00000464216 403 ntBASIC2.88□□□□□ -1.95
LINC01006Q8NI28 AC026353.1-201ENST00000470523 558 ntTSL 2 BASIC2.88□□□□□ -1.95
LINC01006Q8NI28 RPL21P103-201ENST00000479921 488 ntBASIC2.88□□□□□ -1.95
LINC01006Q8NI28 HMGB1P28-201ENST00000507778 552 ntBASIC2.88□□□□□ -1.95
LINC01006Q8NI28 AC026784.1-201ENST00000507986 352 ntBASIC2.88□□□□□ -1.95
LINC01006Q8NI28 MTCYBP37-201ENST00000510642 1133 ntBASIC2.88□□□□□ -1.95
LINC01006Q8NI28 AC108467.1-201ENST00000515623 672 ntTSL 3 BASIC2.88□□□□□ -1.95
LINC01006Q8NI28 RN7SKP234-201ENST00000517173 224 ntBASIC2.88□□□□□ -1.95
LINC01006Q8NI28 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC2.88□□□□□ -1.95
LINC01006Q8NI28 PTK2-220ENST00000520151 573 ntTSL 4 BASIC2.88□□□□□ -1.95
LINC01006Q8NI28 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC2.88□□□□□ -1.95
LINC01006Q8NI28 SLC2A13P1-201ENST00000531560 322 ntBASIC2.88□□□□□ -1.95
LINC01006Q8NI28 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC2.88□□□□□ -1.95
LINC01006Q8NI28 AC063948.1-201ENST00000547360 379 ntTSL 5 BASIC2.88□□□□□ -1.95
LINC01006Q8NI28 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC2.88□□□□□ -1.95
LINC01006Q8NI28 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC2.88□□□□□ -1.95
LINC01006Q8NI28 NACA-211ENST00000548563 827 ntTSL 5 BASIC2.88□□□□□ -1.95
LINC01006Q8NI28 AC107016.1-201ENST00000550463 337 ntBASIC2.88□□□□□ -1.95
LINC01006Q8NI28 CFL2-206ENST00000556161 546 ntTSL 4 BASIC2.88□□□□□ -1.95
LINC01006Q8NI28 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC2.88□□□□□ -1.95
LINC01006Q8NI28 MTCYBP28-201ENST00000566728 1132 ntBASIC2.88□□□□□ -1.95
LINC01006Q8NI28 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC2.88□□□□□ -1.95
LINC01006Q8NI28 AC008088.1-201ENST00000580993 280 ntBASIC2.88□□□□□ -1.95
LINC01006Q8NI28 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC2.88□□□□□ -1.95
LINC01006Q8NI28 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC2.88□□□□□ -1.95
LINC01006Q8NI28 AC006116.10-201ENST00000591836 581 ntBASIC2.88□□□□□ -1.95
LINC01006Q8NI28 BNIP3P24-201ENST00000593398 557 ntBASIC2.88□□□□□ -1.95
LINC01006Q8NI28 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC2.88□□□□□ -1.95
LINC01006Q8NI28 VN1R90P-201ENST00000595717 726 ntBASIC2.88□□□□□ -1.95
LINC01006Q8NI28 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC2.88□□□□□ -1.95
LINC01006Q8NI28 VN1R82P-201ENST00000601481 356 ntBASIC2.88□□□□□ -1.95
LINC01006Q8NI28 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC2.88□□□□□ -1.95
LINC01006Q8NI28 AL139395.1-201ENST00000603662 160 ntBASIC2.88□□□□□ -1.95
LINC01006Q8NI28 AL163642.2-201ENST00000604722 1019 ntBASIC2.88□□□□□ -1.95
LINC01006Q8NI28 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC2.88□□□□□ -1.95
LINC01006Q8NI28 MIR7851-201ENST00000610611 160 ntBASIC2.88□□□□□ -1.95
LINC01006Q8NI28 ALG13-230ENST00000623189 458 ntTSL 3 BASIC2.88□□□□□ -1.95
LINC01006Q8NI28 AC092184.1-201ENST00000625042 715 ntBASIC2.88□□□□□ -1.95
LINC01006Q8NI28 ABBA01000935.2-201ENST00000637477 838 ntBASIC2.88□□□□□ -1.95
LINC01006Q8NI28 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
LINC01006Q8NI28 CDR1-202ENST00000625883 1485 ntBASIC2.88□□□□□ -1.95
LINC01006Q8NI28 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
LINC01006Q8NI28 KLRC1-201ENST00000347831 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC2.88□□□□□ -1.95
LINC01006Q8NI28 IPO8P1-201ENST00000455509 3109 ntBASIC2.88□□□□□ -1.95
LINC01006Q8NI28 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
LINC01006Q8NI28 AL136964.1-201ENST00000622038 2990 ntBASIC2.88□□□□□ -1.95
LINC01006Q8NI28 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
LINC01006Q8NI28 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC2.87□□□□□ -1.95
LINC01006Q8NI28 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
LINC01006Q8NI28 CREM-206ENST00000354759 1589 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
LINC01006Q8NI28 MTND5P28-201ENST00000438005 1594 ntBASIC2.87□□□□□ -1.95
LINC01006Q8NI28 FBXO8-205ENST00000615392 1591 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
LINC01006Q8NI28 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
LINC01006Q8NI28 ZNF962P-201ENST00000443465 3140 ntBASIC2.87□□□□□ -1.95
LINC01006Q8NI28 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
LINC01006Q8NI28 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC2.87□□□□□ -1.95
LINC01006Q8NI28 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC2.87□□□□□ -1.95
LINC01006Q8NI28 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC2.87□□□□□ -1.95
LINC01006Q8NI28 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC2.87□□□□□ -1.95
LINC01006Q8NI28 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 107.9 ms