Protein–RNA interactions for Protein: Q8NCR9

CLRN3, Clarin-3, humanhuman

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN3Q8NCR9 MIR205HG-206ENST00000440276 539 ntTSL 5 BASIC4.36□□□□□ -1.71
CLRN3Q8NCR9 SPRYD7P1-201ENST00000443861 570 ntBASIC4.36□□□□□ -1.71
CLRN3Q8NCR9 CRYZL1-217ENST00000445393 824 ntTSL 5 BASIC4.36□□□□□ -1.71
CLRN3Q8NCR9 AL671855.1-201ENST00000446875 1203 ntBASIC4.36□□□□□ -1.71
CLRN3Q8NCR9 AC020550.1-201ENST00000447385 163 ntBASIC4.36□□□□□ -1.71
CLRN3Q8NCR9 AC016027.4-201ENST00000450866 277 ntBASIC4.36□□□□□ -1.71
CLRN3Q8NCR9 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC4.36□□□□□ -1.71
CLRN3Q8NCR9 AC104233.1-201ENST00000458107 339 ntTSL 5 BASIC4.36□□□□□ -1.71
CLRN3Q8NCR9 RPL23AP11-201ENST00000475260 469 ntBASIC4.36□□□□□ -1.71
CLRN3Q8NCR9 AC108860.1-201ENST00000484521 383 ntBASIC4.36□□□□□ -1.71
CLRN3Q8NCR9 DEFB109F-201ENST00000491870 277 ntBASIC4.36□□□□□ -1.71
CLRN3Q8NCR9 AC078817.1-201ENST00000492623 435 ntBASIC4.36□□□□□ -1.71
CLRN3Q8NCR9 AC078918.1-201ENST00000498515 228 ntBASIC4.36□□□□□ -1.71
CLRN3Q8NCR9 AC114786.4-201ENST00000508771 728 ntBASIC4.36□□□□□ -1.71
CLRN3Q8NCR9 AC004062.1-201ENST00000509926 645 ntBASIC4.36□□□□□ -1.71
CLRN3Q8NCR9 AC007016.1-201ENST00000512110 244 ntBASIC4.36□□□□□ -1.71
CLRN3Q8NCR9 HMGN1P9-201ENST00000515212 298 ntBASIC4.36□□□□□ -1.71
CLRN3Q8NCR9 RNU6-352P-201ENST00000516908 107 ntBASIC4.36□□□□□ -1.71
CLRN3Q8NCR9 WASHC5-AS1-201ENST00000519140 587 ntTSL 4 BASIC4.36□□□□□ -1.71
CLRN3Q8NCR9 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC4.36□□□□□ -1.71
CLRN3Q8NCR9 SUB1P1-201ENST00000524415 382 ntBASIC4.36□□□□□ -1.71
CLRN3Q8NCR9 AC084121.1-201ENST00000533882 835 ntBASIC4.36□□□□□ -1.71
CLRN3Q8NCR9 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC4.36□□□□□ -1.71
CLRN3Q8NCR9 AC117373.1-201ENST00000544036 392 ntTSL 3 BASIC4.36□□□□□ -1.71
CLRN3Q8NCR9 AL157871.6-201ENST00000553954 206 ntTSL 2 BASIC4.36□□□□□ -1.71
CLRN3Q8NCR9 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC4.36□□□□□ -1.71
CLRN3Q8NCR9 AP3S2-214ENST00000560940 519 ntTSL 5 BASIC4.36□□□□□ -1.71
CLRN3Q8NCR9 AL138976.2-201ENST00000563989 694 ntBASIC4.36□□□□□ -1.71
CLRN3Q8NCR9 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC4.36□□□□□ -1.71
CLRN3Q8NCR9 LINC01916-201ENST00000582028 559 ntTSL 4 BASIC4.36□□□□□ -1.71
CLRN3Q8NCR9 AC010525.2-201ENST00000590920 195 ntBASIC4.36□□□□□ -1.71
CLRN3Q8NCR9 AC005255.1-201ENST00000593748 216 ntBASIC4.36□□□□□ -1.71
CLRN3Q8NCR9 AL132655.1-201ENST00000601795 1153 ntTSL 3 BASIC4.36□□□□□ -1.71
CLRN3Q8NCR9 AL031320.1-201ENST00000604177 357 ntBASIC4.36□□□□□ -1.71
CLRN3Q8NCR9 ADPRM-204ENST00000609540 1138 ntTSL 5 BASIC4.36□□□□□ -1.71
CLRN3Q8NCR9 MIR6774-201ENST00000614651 70 ntBASIC4.36□□□□□ -1.71
CLRN3Q8NCR9 ZNHIT3-208ENST00000619730 926 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
CLRN3Q8NCR9 AC011155.2-201ENST00000623202 216 ntBASIC4.36□□□□□ -1.71
CLRN3Q8NCR9 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC4.36□□□□□ -1.71
CLRN3Q8NCR9 GTDC1-220ENST00000618778 2317 ntTSL 5 BASIC4.36□□□□□ -1.71
CLRN3Q8NCR9 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC4.36□□□□□ -1.71
CLRN3Q8NCR9 AC139713.2-215ENST00000641428 5037 ntBASIC4.36□□□□□ -1.71
CLRN3Q8NCR9 MTND4P14-201ENST00000435799 1354 ntBASIC4.36□□□□□ -1.71
CLRN3Q8NCR9 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
CLRN3Q8NCR9 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
CLRN3Q8NCR9 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC4.36□□□□□ -1.71
CLRN3Q8NCR9 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC4.36□□□□□ -1.71
CLRN3Q8NCR9 AC108467.2-201ENST00000617640 1597 ntBASIC4.36□□□□□ -1.71
CLRN3Q8NCR9 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC4.35□□□□□ -1.71
CLRN3Q8NCR9 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC4.35□□□□□ -1.71
CLRN3Q8NCR9 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC4.35□□□□□ -1.71
CLRN3Q8NCR9 LINC02010-202ENST00000471638 1829 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
CLRN3Q8NCR9 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC4.35□□□□□ -1.71
CLRN3Q8NCR9 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC4.35□□□□□ -1.71
CLRN3Q8NCR9 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC4.35□□□□□ -1.71
CLRN3Q8NCR9 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC4.35□□□□□ -1.71
CLRN3Q8NCR9 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC4.35□□□□□ -1.71
CLRN3Q8NCR9 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC4.35□□□□□ -1.71
CLRN3Q8NCR9 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC4.35□□□□□ -1.71
CLRN3Q8NCR9 MED23-203ENST00000368058 4576 ntTSL 5 BASIC4.35□□□□□ -1.71
CLRN3Q8NCR9 AC010894.1-201ENST00000313760 361 ntBASIC4.35□□□□□ -1.71
CLRN3Q8NCR9 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
CLRN3Q8NCR9 DEFB108F-201ENST00000344638 222 ntBASIC4.35□□□□□ -1.71
CLRN3Q8NCR9 PLAC1-201ENST00000359237 1131 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
CLRN3Q8NCR9 RNU5A-1-201ENST00000362698 116 ntBASIC4.35□□□□□ -1.71
CLRN3Q8NCR9 Y_RNA.70-201ENST00000362886 110 ntBASIC4.35□□□□□ -1.71
CLRN3Q8NCR9 SNORD115-7-201ENST00000365306 82 ntBASIC4.35□□□□□ -1.71
CLRN3Q8NCR9 XAGE3-202ENST00000375491 489 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
CLRN3Q8NCR9 SNORA36C-201ENST00000384289 132 ntBASIC4.35□□□□□ -1.71
CLRN3Q8NCR9 RNU6-903P-201ENST00000391270 109 ntBASIC4.35□□□□□ -1.71
CLRN3Q8NCR9 CD3D-202ENST00000392884 476 ntTSL 2 BASIC4.35□□□□□ -1.71
CLRN3Q8NCR9 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC4.35□□□□□ -1.71
CLRN3Q8NCR9 SOD2P1-201ENST00000396543 562 ntBASIC4.35□□□□□ -1.71
CLRN3Q8NCR9 AL606923.1-201ENST00000406616 190 ntBASIC4.35□□□□□ -1.71
CLRN3Q8NCR9 RN7SKP16-201ENST00000410180 299 ntBASIC4.35□□□□□ -1.71
CLRN3Q8NCR9 RSU1P3-201ENST00000412878 835 ntBASIC4.35□□□□□ -1.71
CLRN3Q8NCR9 OR6E1P-201ENST00000414424 923 ntBASIC4.35□□□□□ -1.71
CLRN3Q8NCR9 AC068533.1-201ENST00000418542 415 ntBASIC4.35□□□□□ -1.71
CLRN3Q8NCR9 ICA1L-210ENST00000425178 879 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
CLRN3Q8NCR9 FAR2P4-202ENST00000425399 584 ntBASIC4.35□□□□□ -1.71
CLRN3Q8NCR9 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC4.35□□□□□ -1.71
CLRN3Q8NCR9 RPL7L1P9-201ENST00000431298 745 ntBASIC4.35□□□□□ -1.71
CLRN3Q8NCR9 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC4.35□□□□□ -1.71
CLRN3Q8NCR9 AL645939.3-201ENST00000435408 225 ntBASIC4.35□□□□□ -1.71
CLRN3Q8NCR9 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC4.35□□□□□ -1.71
CLRN3Q8NCR9 USP9YP8-201ENST00000441913 500 ntBASIC4.35□□□□□ -1.71
CLRN3Q8NCR9 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC4.35□□□□□ -1.71
CLRN3Q8NCR9 AL139161.1-201ENST00000443207 190 ntTSL 5 BASIC4.35□□□□□ -1.71
CLRN3Q8NCR9 NEFMP1-201ENST00000443423 1006 ntBASIC4.35□□□□□ -1.71
CLRN3Q8NCR9 RPL21P133-201ENST00000443666 476 ntBASIC4.35□□□□□ -1.71
CLRN3Q8NCR9 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC4.35□□□□□ -1.71
CLRN3Q8NCR9 CBWD4P-201ENST00000445695 655 ntBASIC4.35□□□□□ -1.71
CLRN3Q8NCR9 AL645939.1-201ENST00000453429 797 ntBASIC4.35□□□□□ -1.71
CLRN3Q8NCR9 RPL31P11-202ENST00000454082 372 ntBASIC4.35□□□□□ -1.71
CLRN3Q8NCR9 FGF7P3-201ENST00000454645 303 ntBASIC4.35□□□□□ -1.71
CLRN3Q8NCR9 RPL23AP31-201ENST00000456160 467 ntBASIC4.35□□□□□ -1.71
CLRN3Q8NCR9 SNRPFP3-201ENST00000457792 225 ntBASIC4.35□□□□□ -1.71
CLRN3Q8NCR9 snoU13.4-201ENST00000458916 104 ntBASIC4.35□□□□□ -1.71
CLRN3Q8NCR9 AC100832.1-201ENST00000471945 383 ntBASIC4.35□□□□□ -1.71
CLRN3Q8NCR9 HSPE1P6-201ENST00000479457 291 ntBASIC4.35□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 128.2 ms