Protein–RNA interactions for Protein: Q8NA47

CCDC63, Coiled-coil domain-containing protein 63, humanhuman

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC63Q8NA47 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC3.65□□□□□ -1.83
CCDC63Q8NA47 SLC2A13P1-201ENST00000531560 322 ntBASIC3.65□□□□□ -1.83
CCDC63Q8NA47 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC3.65□□□□□ -1.83
CCDC63Q8NA47 AP000619.3-201ENST00000535634 1127 ntBASIC3.65□□□□□ -1.83
CCDC63Q8NA47 AC008127.2-201ENST00000549925 1075 ntBASIC3.65□□□□□ -1.83
CCDC63Q8NA47 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
CCDC63Q8NA47 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC3.65□□□□□ -1.83
CCDC63Q8NA47 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC3.65□□□□□ -1.83
CCDC63Q8NA47 AL032819.1-201ENST00000568554 379 ntTSL 3 BASIC3.65□□□□□ -1.83
CCDC63Q8NA47 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC3.65□□□□□ -1.83
CCDC63Q8NA47 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC3.65□□□□□ -1.83
CCDC63Q8NA47 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC3.65□□□□□ -1.83
CCDC63Q8NA47 AC113368.1-201ENST00000603736 382 ntBASIC3.65□□□□□ -1.83
CCDC63Q8NA47 AC008745.1-201ENST00000604064 271 ntBASIC3.65□□□□□ -1.83
CCDC63Q8NA47 AC011816.2-201ENST00000607089 556 ntBASIC3.65□□□□□ -1.83
CCDC63Q8NA47 AC131235.4-201ENST00000609288 620 ntBASIC3.65□□□□□ -1.83
CCDC63Q8NA47 MIR6867-201ENST00000610636 67 ntBASIC3.65□□□□□ -1.83
CCDC63Q8NA47 U73479.1-201ENST00000618062 168 ntBASIC3.65□□□□□ -1.83
CCDC63Q8NA47 AC109809.1-201ENST00000619665 545 ntBASIC3.65□□□□□ -1.83
CCDC63Q8NA47 PLCE1P1-201ENST00000622094 305 ntBASIC3.65□□□□□ -1.83
CCDC63Q8NA47 TEX41-280ENST00000629185 591 ntTSL 5 BASIC3.65□□□□□ -1.83
CCDC63Q8NA47 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC3.65□□□□□ -1.83
CCDC63Q8NA47 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC3.65□□□□□ -1.83
CCDC63Q8NA47 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.65□□□□□ -1.83
CCDC63Q8NA47 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.65□□□□□ -1.83
CCDC63Q8NA47 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
CCDC63Q8NA47 LINC02426-201ENST00000550506 1372 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
CCDC63Q8NA47 MFF-206ENST00000392059 1710 ntTSL 5 BASIC3.64□□□□□ -1.83
CCDC63Q8NA47 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.64□□□□□ -1.83
CCDC63Q8NA47 SNORA7.2-201ENST00000364446 145 ntBASIC3.64□□□□□ -1.83
CCDC63Q8NA47 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
CCDC63Q8NA47 AL022722.2-201ENST00000402519 180 ntBASIC3.64□□□□□ -1.83
CCDC63Q8NA47 RNA5SP56-201ENST00000410277 118 ntBASIC3.64□□□□□ -1.83
CCDC63Q8NA47 RNA5SP107-201ENST00000411358 122 ntBASIC3.64□□□□□ -1.83
CCDC63Q8NA47 RPS3AP25-201ENST00000411660 793 ntBASIC3.64□□□□□ -1.83
CCDC63Q8NA47 AC013286.1-201ENST00000412137 381 ntTSL 5 BASIC3.64□□□□□ -1.83
CCDC63Q8NA47 AL356095.1-201ENST00000417217 199 ntBASIC3.64□□□□□ -1.83
CCDC63Q8NA47 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC3.64□□□□□ -1.83
CCDC63Q8NA47 AL133419.1-201ENST00000423153 640 ntTSL 3 BASIC3.64□□□□□ -1.83
CCDC63Q8NA47 AL353801.1-201ENST00000425541 425 ntTSL 3 BASIC3.64□□□□□ -1.83
CCDC63Q8NA47 BRWD1P3-201ENST00000428816 390 ntBASIC3.64□□□□□ -1.83
CCDC63Q8NA47 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC3.64□□□□□ -1.83
CCDC63Q8NA47 AC127537.2-201ENST00000439258 465 ntBASIC3.64□□□□□ -1.83
CCDC63Q8NA47 AL359378.1-201ENST00000439891 400 ntTSL 5 BASIC3.64□□□□□ -1.83
CCDC63Q8NA47 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC3.64□□□□□ -1.83
CCDC63Q8NA47 AC010655.1-201ENST00000449336 292 ntBASIC3.64□□□□□ -1.83
CCDC63Q8NA47 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC3.64□□□□□ -1.83
CCDC63Q8NA47 OFD1P3Y-201ENST00000453312 783 ntBASIC3.64□□□□□ -1.83
CCDC63Q8NA47 NECAP1P2-201ENST00000455668 727 ntBASIC3.64□□□□□ -1.83
CCDC63Q8NA47 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC3.64□□□□□ -1.83
CCDC63Q8NA47 U3.44-201ENST00000458938 192 ntBASIC3.64□□□□□ -1.83
CCDC63Q8NA47 AP002884.2-201ENST00000471647 395 ntBASIC3.64□□□□□ -1.83
CCDC63Q8NA47 RPL7P38-201ENST00000488396 739 ntBASIC3.64□□□□□ -1.83
CCDC63Q8NA47 AC069444.1-201ENST00000489428 266 ntTSL 3 BASIC3.64□□□□□ -1.83
CCDC63Q8NA47 HMGB3P15-201ENST00000507326 574 ntBASIC3.64□□□□□ -1.83
CCDC63Q8NA47 RNY4P37-201ENST00000516225 96 ntBASIC3.64□□□□□ -1.83
CCDC63Q8NA47 AC087855.1-201ENST00000518178 430 ntTSL 3 BASIC3.64□□□□□ -1.83
CCDC63Q8NA47 MRPS36P3-201ENST00000519284 130 ntBASIC3.64□□□□□ -1.83
CCDC63Q8NA47 AC022367.1-202ENST00000535066 537 ntTSL 3 BASIC3.64□□□□□ -1.83
CCDC63Q8NA47 REXO2-218ENST00000544827 880 ntTSL 3 BASIC3.64□□□□□ -1.83
CCDC63Q8NA47 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC3.64□□□□□ -1.83
CCDC63Q8NA47 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
CCDC63Q8NA47 AC004024.1-201ENST00000549244 247 ntBASIC3.64□□□□□ -1.83
CCDC63Q8NA47 AC010198.2-201ENST00000550612 259 ntBASIC3.64□□□□□ -1.83
CCDC63Q8NA47 LINC02329-201ENST00000554753 511 ntTSL 5 BASIC3.64□□□□□ -1.83
CCDC63Q8NA47 IGKV2OR2-8-201ENST00000558710 300 ntBASIC3.64□□□□□ -1.83
CCDC63Q8NA47 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC3.64□□□□□ -1.83
CCDC63Q8NA47 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC3.64□□□□□ -1.83
CCDC63Q8NA47 IGHV3-29-201ENST00000604817 344 ntBASIC3.64□□□□□ -1.83
CCDC63Q8NA47 AC013244.3-201ENST00000605614 388 ntBASIC3.64□□□□□ -1.83
CCDC63Q8NA47 AC099778.2-201ENST00000610904 211 ntBASIC3.64□□□□□ -1.83
CCDC63Q8NA47 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
CCDC63Q8NA47 AC069209.1-201ENST00000619282 651 ntBASIC3.64□□□□□ -1.83
CCDC63Q8NA47 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC3.64□□□□□ -1.83
CCDC63Q8NA47 ZNF33BP1-201ENST00000452497 1834 ntBASIC3.64□□□□□ -1.83
CCDC63Q8NA47 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
CCDC63Q8NA47 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
CCDC63Q8NA47 AC116096.1-201ENST00000566804 2314 ntBASIC3.64□□□□□ -1.83
CCDC63Q8NA47 AC092326.2-201ENST00000624772 1561 ntBASIC3.63□□□□□ -1.83
CCDC63Q8NA47 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.63□□□□□ -1.83
CCDC63Q8NA47 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC3.63□□□□□ -1.83
CCDC63Q8NA47 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.63□□□□□ -1.83
CCDC63Q8NA47 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC3.63□□□□□ -1.83
CCDC63Q8NA47 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC3.63□□□□□ -1.83
CCDC63Q8NA47 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.63□□□□□ -1.83
CCDC63Q8NA47 ZNF876P-202ENST00000398732 1485 ntBASIC3.63□□□□□ -1.83
CCDC63Q8NA47 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
CCDC63Q8NA47 RNU6-989P-201ENST00000362756 107 ntBASIC3.63□□□□□ -1.83
CCDC63Q8NA47 RNU6-335P-201ENST00000364563 113 ntBASIC3.63□□□□□ -1.83
CCDC63Q8NA47 RNU4-28P-201ENST00000364739 141 ntBASIC3.63□□□□□ -1.83
CCDC63Q8NA47 MTND4LP20-201ENST00000402379 270 ntBASIC3.63□□□□□ -1.83
CCDC63Q8NA47 RPL22P18-201ENST00000417197 377 ntBASIC3.63□□□□□ -1.83
CCDC63Q8NA47 RPL18P10-201ENST00000425606 538 ntBASIC3.63□□□□□ -1.83
CCDC63Q8NA47 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC3.63□□□□□ -1.83
CCDC63Q8NA47 HRH4-202ENST00000426880 909 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
CCDC63Q8NA47 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
CCDC63Q8NA47 MTCYBP11-201ENST00000447254 1109 ntBASIC3.63□□□□□ -1.83
CCDC63Q8NA47 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC3.63□□□□□ -1.83
CCDC63Q8NA47 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC3.63□□□□□ -1.83
CCDC63Q8NA47 RPL18AP17-201ENST00000455326 198 ntBASIC3.63□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 142 ms