Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 SEPT7P6-201ENST00000469999 1143 ntBASIC3.61□□□□□ -1.83
VPS8Q8N3P4 NDUFB4P9-201ENST00000511646 388 ntBASIC3.61□□□□□ -1.83
VPS8Q8N3P4 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC3.61□□□□□ -1.83
VPS8Q8N3P4 PIH1D2-208ENST00000532211 1103 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
VPS8Q8N3P4 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC3.61□□□□□ -1.83
VPS8Q8N3P4 AC012409.1-202ENST00000558449 639 ntTSL 2 BASIC3.61□□□□□ -1.83
VPS8Q8N3P4 ZFAND6-208ENST00000558688 780 ntTSL 2 BASIC3.61□□□□□ -1.83
VPS8Q8N3P4 AC060766.3-201ENST00000591442 263 ntBASIC3.61□□□□□ -1.83
VPS8Q8N3P4 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC3.61□□□□□ -1.83
VPS8Q8N3P4 AC112503.1-201ENST00000608436 391 ntBASIC3.61□□□□□ -1.83
VPS8Q8N3P4 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC3.61□□□□□ -1.83
VPS8Q8N3P4 MIR6715A-201ENST00000615929 79 ntBASIC3.61□□□□□ -1.83
VPS8Q8N3P4 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.61□□□□□ -1.83
VPS8Q8N3P4 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
VPS8Q8N3P4 RNU6-328P-201ENST00000390887 106 ntBASIC3.61□□□□□ -1.83
VPS8Q8N3P4 AL024474.1-201ENST00000404655 591 ntBASIC3.61□□□□□ -1.83
VPS8Q8N3P4 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC3.61□□□□□ -1.83
VPS8Q8N3P4 AC008481.1-201ENST00000463278 396 ntBASIC3.61□□□□□ -1.83
VPS8Q8N3P4 ANXA2P1-201ENST00000505539 926 ntBASIC3.61□□□□□ -1.83
VPS8Q8N3P4 AC079866.2-201ENST00000541870 515 ntTSL 3 BASIC3.61□□□□□ -1.83
VPS8Q8N3P4 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC3.6□□□□□ -1.83
VPS8Q8N3P4 Z99496.1-201ENST00000469424 1477 ntBASIC3.6□□□□□ -1.83
VPS8Q8N3P4 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC3.6□□□□□ -1.83
VPS8Q8N3P4 HMGB1P11-201ENST00000413899 637 ntBASIC3.6□□□□□ -1.83
VPS8Q8N3P4 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC3.6□□□□□ -1.83
VPS8Q8N3P4 ARF4P2-201ENST00000430209 526 ntBASIC3.6□□□□□ -1.83
VPS8Q8N3P4 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
VPS8Q8N3P4 AL161752.1-201ENST00000557721 263 ntTSL 2 BASIC3.6□□□□□ -1.83
VPS8Q8N3P4 MIR3670-2-201ENST00000582974 65 ntBASIC3.6□□□□□ -1.83
VPS8Q8N3P4 MIR3670-1-201ENST00000584160 65 ntBASIC3.6□□□□□ -1.83
VPS8Q8N3P4 MIR3670-3-201ENST00000584855 65 ntBASIC3.6□□□□□ -1.83
VPS8Q8N3P4 LINC00397-202ENST00000606785 409 ntTSL 5 BASIC3.6□□□□□ -1.83
VPS8Q8N3P4 MIR3670-4-201ENST00000612260 65 ntBASIC3.6□□□□□ -1.83
VPS8Q8N3P4 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.6□□□□□ -1.83
VPS8Q8N3P4 AC098798.1-201ENST00000503998 1447 ntTSL 5 BASIC3.59□□□□□ -1.83
VPS8Q8N3P4 AL592437.2-201ENST00000421655 2434 ntBASIC3.59□□□□□ -1.83
VPS8Q8N3P4 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC3.59□□□□□ -1.83
VPS8Q8N3P4 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC3.59□□□□□ -1.84
VPS8Q8N3P4 DSCR8-202ENST00000400477 534 ntAPPRIS ALT2 TSL 1 (best) BASIC3.59□□□□□ -1.84
VPS8Q8N3P4 RN7SKP192-201ENST00000411291 327 ntBASIC3.59□□□□□ -1.84
VPS8Q8N3P4 NPM1P11-201ENST00000417106 855 ntBASIC3.59□□□□□ -1.84
VPS8Q8N3P4 NECAP1P2-201ENST00000455668 727 ntBASIC3.59□□□□□ -1.84
VPS8Q8N3P4 TBCAP3-201ENST00000512475 312 ntBASIC3.59□□□□□ -1.84
VPS8Q8N3P4 AC007536.1-201ENST00000533382 349 ntBASIC3.59□□□□□ -1.84
VPS8Q8N3P4 AC092131.1-201ENST00000564046 548 ntTSL 4 BASIC3.59□□□□□ -1.84
VPS8Q8N3P4 OR11H4-202ENST00000641082 1585 ntAPPRIS P1 BASIC3.59□□□□□ -1.84
VPS8Q8N3P4 AC114546.3-201ENST00000623582 1734 ntBASIC3.58□□□□□ -1.84
VPS8Q8N3P4 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
VPS8Q8N3P4 AC097714.1-201ENST00000511272 1647 ntBASIC3.58□□□□□ -1.84
VPS8Q8N3P4 RNA5SP432-201ENST00000362480 116 ntBASIC3.58□□□□□ -1.84
VPS8Q8N3P4 RNU1-73P-201ENST00000383971 164 ntBASIC3.58□□□□□ -1.84
VPS8Q8N3P4 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC3.58□□□□□ -1.84
VPS8Q8N3P4 AL139294.1-201ENST00000435739 512 ntTSL 2 BASIC3.58□□□□□ -1.84
VPS8Q8N3P4 AC099677.4-201ENST00000446786 380 ntTSL 3 BASIC3.58□□□□□ -1.84
VPS8Q8N3P4 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC3.58□□□□□ -1.84
VPS8Q8N3P4 PCDH9-AS4-201ENST00000456459 436 ntTSL 3 BASIC3.58□□□□□ -1.84
VPS8Q8N3P4 RPL23AP62-201ENST00000463396 453 ntBASIC3.58□□□□□ -1.84
VPS8Q8N3P4 AL049830.2-201ENST00000480072 201 ntBASIC3.58□□□□□ -1.84
VPS8Q8N3P4 AP001086.1-201ENST00000494882 321 ntBASIC3.58□□□□□ -1.84
VPS8Q8N3P4 MAL2-205ENST00000521048 575 ntTSL 4 BASIC3.58□□□□□ -1.84
VPS8Q8N3P4 AC009063.1-201ENST00000563342 702 ntBASIC3.58□□□□□ -1.84
VPS8Q8N3P4 AC105137.2-201ENST00000569073 466 ntBASIC3.58□□□□□ -1.84
VPS8Q8N3P4 MIR1273D-201ENST00000577266 86 ntBASIC3.58□□□□□ -1.84
VPS8Q8N3P4 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC3.58□□□□□ -1.84
VPS8Q8N3P4 AC092326.2-201ENST00000624772 1561 ntBASIC3.58□□□□□ -1.84
VPS8Q8N3P4 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC3.58□□□□□ -1.84
VPS8Q8N3P4 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
VPS8Q8N3P4 MTCO1P14-201ENST00000441695 1559 ntBASIC3.57□□□□□ -1.84
VPS8Q8N3P4 TAS2R9-201ENST00000240691 1075 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
VPS8Q8N3P4 SNORD114-30-201ENST00000364448 72 ntBASIC3.57□□□□□ -1.84
VPS8Q8N3P4 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
VPS8Q8N3P4 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
VPS8Q8N3P4 AC107081.1-201ENST00000414975 361 ntBASIC3.57□□□□□ -1.84
VPS8Q8N3P4 AC092427.1-202ENST00000430569 476 ntBASIC3.57□□□□□ -1.84
VPS8Q8N3P4 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC3.57□□□□□ -1.84
VPS8Q8N3P4 BX276092.4-201ENST00000452056 248 ntBASIC3.57□□□□□ -1.84
VPS8Q8N3P4 YWHAEP4-201ENST00000505390 198 ntBASIC3.57□□□□□ -1.84
VPS8Q8N3P4 MTCYBP20-201ENST00000524239 1129 ntBASIC3.57□□□□□ -1.84
VPS8Q8N3P4 AC016493.1-201ENST00000586106 688 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
VPS8Q8N3P4 AC006254.3-201ENST00000603353 884 ntBASIC3.57□□□□□ -1.84
VPS8Q8N3P4 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC3.57□□□□□ -1.84
VPS8Q8N3P4 FAM114A2-210ENST00000520313 1394 ntTSL 2 BASIC3.57□□□□□ -1.84
VPS8Q8N3P4 AC093010.3-201ENST00000570269 15214 ntBASIC3.56□□□□□ -1.84
VPS8Q8N3P4 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
VPS8Q8N3P4 OR52E6-201ENST00000329322 970 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
VPS8Q8N3P4 SPANXN3-201ENST00000370503 590 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
VPS8Q8N3P4 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC3.56□□□□□ -1.84
VPS8Q8N3P4 PTP4A1P7-201ENST00000423476 514 ntBASIC3.56□□□□□ -1.84
VPS8Q8N3P4 LINC01986-201ENST00000440867 590 ntTSL 5 BASIC3.56□□□□□ -1.84
VPS8Q8N3P4 AL513124.1-201ENST00000450410 614 ntBASIC3.56□□□□□ -1.84
VPS8Q8N3P4 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC3.56□□□□□ -1.84
VPS8Q8N3P4 RPL23AP49-201ENST00000492925 468 ntBASIC3.56□□□□□ -1.84
VPS8Q8N3P4 AC004486.1-201ENST00000546846 233 ntBASIC3.56□□□□□ -1.84
VPS8Q8N3P4 AC007610.2-201ENST00000566770 666 ntTSL 3 BASIC3.56□□□□□ -1.84
VPS8Q8N3P4 LINC02098-202ENST00000609260 554 ntTSL 3 BASIC3.56□□□□□ -1.84
VPS8Q8N3P4 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC3.56□□□□□ -1.84
VPS8Q8N3P4 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC3.56□□□□□ -1.84
VPS8Q8N3P4 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC3.56□□□□□ -1.84
VPS8Q8N3P4 AC010297.1-201ENST00000623948 149 ntBASIC3.56□□□□□ -1.84
VPS8Q8N3P4 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC3.56□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 103.5 ms