Protein–RNA interactions for Protein: Q8IVD9

NUDCD3, NudC domain-containing protein 3, humanhuman

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3Q8IVD9 AC004925.1-201ENST00000624256 2706 ntBASIC3.17□□□□□ -1.9
NUDCD3Q8IVD9 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
NUDCD3Q8IVD9 OR8K5-201ENST00000313447 924 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
NUDCD3Q8IVD9 PLG-203ENST00000366924 1166 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
NUDCD3Q8IVD9 DEFB109C-201ENST00000382575 264 ntBASIC3.17□□□□□ -1.9
NUDCD3Q8IVD9 DEFB109B-201ENST00000382656 264 ntBASIC3.17□□□□□ -1.9
NUDCD3Q8IVD9 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
NUDCD3Q8IVD9 AL121972.1-201ENST00000402023 252 ntBASIC3.17□□□□□ -1.9
NUDCD3Q8IVD9 AL445189.1-201ENST00000405722 338 ntBASIC3.17□□□□□ -1.9
NUDCD3Q8IVD9 RNA5SP56-201ENST00000410277 118 ntBASIC3.17□□□□□ -1.9
NUDCD3Q8IVD9 RN7SKP202-201ENST00000410439 330 ntBASIC3.17□□□□□ -1.9
NUDCD3Q8IVD9 RN7SKP159-201ENST00000410657 292 ntBASIC3.17□□□□□ -1.9
NUDCD3Q8IVD9 CYCSP19-201ENST00000411715 316 ntBASIC3.17□□□□□ -1.9
NUDCD3Q8IVD9 AC092638.1-201ENST00000411966 1275 ntBASIC3.17□□□□□ -1.9
NUDCD3Q8IVD9 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
NUDCD3Q8IVD9 MRPL50P2-201ENST00000416821 482 ntBASIC3.17□□□□□ -1.9
NUDCD3Q8IVD9 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC3.17□□□□□ -1.9
NUDCD3Q8IVD9 BX842559.1-201ENST00000419615 532 ntBASIC3.17□□□□□ -1.9
NUDCD3Q8IVD9 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC3.17□□□□□ -1.9
NUDCD3Q8IVD9 SFR1P2-201ENST00000421841 730 ntBASIC3.17□□□□□ -1.9
NUDCD3Q8IVD9 AC012498.1-201ENST00000424037 437 ntBASIC3.17□□□□□ -1.9
NUDCD3Q8IVD9 SEPT14P24-201ENST00000447236 180 ntBASIC3.17□□□□□ -1.9
NUDCD3Q8IVD9 AC005008.2-202ENST00000447776 439 ntTSL 3 BASIC3.17□□□□□ -1.9
NUDCD3Q8IVD9 AC093392.2-201ENST00000450682 337 ntBASIC3.17□□□□□ -1.9
NUDCD3Q8IVD9 AC091179.1-201ENST00000461606 579 ntBASIC3.17□□□□□ -1.9
NUDCD3Q8IVD9 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.17□□□□□ -1.9
NUDCD3Q8IVD9 AL136126.1-201ENST00000473603 402 ntBASIC3.17□□□□□ -1.9
NUDCD3Q8IVD9 AL024509.2-201ENST00000493462 493 ntBASIC3.17□□□□□ -1.9
NUDCD3Q8IVD9 AC091860.1-201ENST00000505723 432 ntBASIC3.17□□□□□ -1.9
NUDCD3Q8IVD9 AC002456.2-201ENST00000509356 380 ntBASIC3.17□□□□□ -1.9
NUDCD3Q8IVD9 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC3.17□□□□□ -1.9
NUDCD3Q8IVD9 RNU5A-7P-201ENST00000515979 116 ntBASIC3.17□□□□□ -1.9
NUDCD3Q8IVD9 IGKV3OR22-2-201ENST00000517943 313 ntBASIC3.17□□□□□ -1.9
NUDCD3Q8IVD9 AP000790.1-201ENST00000528891 737 ntBASIC3.17□□□□□ -1.9
NUDCD3Q8IVD9 AC022367.1-202ENST00000535066 537 ntTSL 3 BASIC3.17□□□□□ -1.9
NUDCD3Q8IVD9 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC3.17□□□□□ -1.9
NUDCD3Q8IVD9 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC3.17□□□□□ -1.9
NUDCD3Q8IVD9 AC090618.1-201ENST00000571972 585 ntTSL 2 BASIC3.17□□□□□ -1.9
NUDCD3Q8IVD9 AC090371.2-203ENST00000578782 473 ntTSL 3 BASIC3.17□□□□□ -1.9
NUDCD3Q8IVD9 SNORD39.3-201ENST00000584451 71 ntBASIC3.17□□□□□ -1.9
NUDCD3Q8IVD9 AL669831.4-202ENST00000590817 238 ntBASIC3.17□□□□□ -1.9
NUDCD3Q8IVD9 AL161896.1-201ENST00000597248 508 ntTSL 4 BASIC3.17□□□□□ -1.9
NUDCD3Q8IVD9 AL353811.1-201ENST00000602851 736 ntTSL 5 BASIC3.17□□□□□ -1.9
NUDCD3Q8IVD9 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC3.17□□□□□ -1.9
NUDCD3Q8IVD9 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC3.17□□□□□ -1.9
NUDCD3Q8IVD9 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC3.17□□□□□ -1.9
NUDCD3Q8IVD9 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC3.17□□□□□ -1.9
NUDCD3Q8IVD9 RBMS3-AS3-202ENST00000635847 738 ntTSL 5 BASIC3.17□□□□□ -1.9
NUDCD3Q8IVD9 MTND5P19-201ENST00000424872 1794 ntBASIC3.17□□□□□ -1.9
NUDCD3Q8IVD9 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
NUDCD3Q8IVD9 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC3.16□□□□□ -1.9
NUDCD3Q8IVD9 THUMPD3P1-201ENST00000506556 1480 ntBASIC3.16□□□□□ -1.9
NUDCD3Q8IVD9 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC3.16□□□□□ -1.9
NUDCD3Q8IVD9 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
NUDCD3Q8IVD9 RNU6-339P-201ENST00000384310 107 ntBASIC3.16□□□□□ -1.9
NUDCD3Q8IVD9 RNU6-549P-201ENST00000384433 107 ntBASIC3.16□□□□□ -1.9
NUDCD3Q8IVD9 RNU6ATAC-201ENST00000408749 126 ntBASIC3.16□□□□□ -1.9
NUDCD3Q8IVD9 RNA5SP129-201ENST00000410276 118 ntBASIC3.16□□□□□ -1.9
NUDCD3Q8IVD9 RNU6-575P-201ENST00000411326 105 ntBASIC3.16□□□□□ -1.9
NUDCD3Q8IVD9 SDCBPP3-201ENST00000419629 891 ntBASIC3.16□□□□□ -1.9
NUDCD3Q8IVD9 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
NUDCD3Q8IVD9 AC244505.4-201ENST00000434905 287 ntBASIC3.16□□□□□ -1.9
NUDCD3Q8IVD9 SSXP5-201ENST00000443473 287 ntBASIC3.16□□□□□ -1.9
NUDCD3Q8IVD9 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC3.16□□□□□ -1.9
NUDCD3Q8IVD9 NPM1P13-201ENST00000452663 865 ntBASIC3.16□□□□□ -1.9
NUDCD3Q8IVD9 RPS24P6-201ENST00000452670 400 ntBASIC3.16□□□□□ -1.9
NUDCD3Q8IVD9 AC004872.1-201ENST00000456062 469 ntTSL 3 BASIC3.16□□□□□ -1.9
NUDCD3Q8IVD9 AC078883.3-201ENST00000458314 512 ntTSL 2 BASIC3.16□□□□□ -1.9
NUDCD3Q8IVD9 snoU13.24-201ENST00000458998 104 ntBASIC3.16□□□□□ -1.9
NUDCD3Q8IVD9 RPS26P21-201ENST00000475397 348 ntBASIC3.16□□□□□ -1.9
NUDCD3Q8IVD9 OR5H5P-201ENST00000503164 928 ntBASIC3.16□□□□□ -1.9
NUDCD3Q8IVD9 AC048346.1-201ENST00000510247 144 ntBASIC3.16□□□□□ -1.9
NUDCD3Q8IVD9 AC011773.3-201ENST00000546501 589 ntTSL 3 BASIC3.16□□□□□ -1.9
NUDCD3Q8IVD9 GTF2IP22-201ENST00000554443 182 ntBASIC3.16□□□□□ -1.9
NUDCD3Q8IVD9 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC3.16□□□□□ -1.9
NUDCD3Q8IVD9 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC3.16□□□□□ -1.9
NUDCD3Q8IVD9 AL513477.2-201ENST00000607858 568 ntBASIC3.16□□□□□ -1.9
NUDCD3Q8IVD9 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC3.16□□□□□ -1.9
NUDCD3Q8IVD9 AC090116.1-201ENST00000615679 446 ntBASIC3.16□□□□□ -1.9
NUDCD3Q8IVD9 AF117829.1-206ENST00000621883 3802 ntBASIC3.16□□□□□ -1.9
NUDCD3Q8IVD9 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
NUDCD3Q8IVD9 AC008264.2-201ENST00000610193 3731 ntBASIC3.16□□□□□ -1.9
NUDCD3Q8IVD9 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC3.16□□□□□ -1.9
NUDCD3Q8IVD9 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
NUDCD3Q8IVD9 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC3.16□□□□□ -1.9
NUDCD3Q8IVD9 AC002546.1-201ENST00000588041 2504 ntBASIC3.16□□□□□ -1.9
NUDCD3Q8IVD9 FTX-214ENST00000638437 12267 ntTSL 5 BASIC3.16□□□□□ -1.9
NUDCD3Q8IVD9 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.9
NUDCD3Q8IVD9 AL353743.1-202ENST00000431724 1695 ntBASIC3.15□□□□□ -1.9
NUDCD3Q8IVD9 IFNG-201ENST00000229135 1218 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
NUDCD3Q8IVD9 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
NUDCD3Q8IVD9 RNU5B-1-201ENST00000363286 116 ntBASIC3.15□□□□□ -1.91
NUDCD3Q8IVD9 MIR554-201ENST00000384874 96 ntBASIC3.15□□□□□ -1.91
NUDCD3Q8IVD9 AL354719.1-201ENST00000406535 843 ntBASIC3.15□□□□□ -1.91
NUDCD3Q8IVD9 AL139098.1-201ENST00000407291 389 ntBASIC3.15□□□□□ -1.91
NUDCD3Q8IVD9 RN7SKP58-201ENST00000411010 305 ntBASIC3.15□□□□□ -1.91
NUDCD3Q8IVD9 OFD1P1Y-201ENST00000411756 1225 ntBASIC3.15□□□□□ -1.91
NUDCD3Q8IVD9 NDUFB4P5-201ENST00000415445 361 ntBASIC3.15□□□□□ -1.91
NUDCD3Q8IVD9 AL445584.1-201ENST00000431451 330 ntBASIC3.15□□□□□ -1.91
NUDCD3Q8IVD9 AL035246.1-201ENST00000433554 1255 ntBASIC3.15□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 87 ms