Protein–RNA interactions for Protein: Q8IV63

VRK3, Inactive serine/threonine-protein kinase VRK3, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3Q8IV63 AC069213.2-201ENST00000420238 366 ntBASIC4.48□□□□□ -1.69
VRK3Q8IV63 AL358176.3-201ENST00000420757 454 ntBASIC4.48□□□□□ -1.69
VRK3Q8IV63 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC4.48□□□□□ -1.69
VRK3Q8IV63 LINC01074-201ENST00000422527 555 ntTSL 3 BASIC4.48□□□□□ -1.69
VRK3Q8IV63 TEX41-204ENST00000423031 491 ntTSL 4 BASIC4.48□□□□□ -1.69
VRK3Q8IV63 EIF1P3-201ENST00000423841 334 ntBASIC4.48□□□□□ -1.69
VRK3Q8IV63 AC133104.1-201ENST00000429100 218 ntBASIC4.48□□□□□ -1.69
VRK3Q8IV63 GTF2IP20-201ENST00000431663 360 ntBASIC4.48□□□□□ -1.69
VRK3Q8IV63 AL080316.1-201ENST00000432438 499 ntTSL 2 BASIC4.48□□□□□ -1.69
VRK3Q8IV63 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC4.48□□□□□ -1.69
VRK3Q8IV63 AL137076.1-201ENST00000441046 551 ntTSL 2 BASIC4.48□□□□□ -1.69
VRK3Q8IV63 RPL23AP16-201ENST00000441715 421 ntBASIC4.48□□□□□ -1.69
VRK3Q8IV63 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC4.48□□□□□ -1.69
VRK3Q8IV63 MTCO1P42-201ENST00000457379 726 ntBASIC4.48□□□□□ -1.69
VRK3Q8IV63 HAX1-208ENST00000483970 1151 ntTSL 2 BASIC4.48□□□□□ -1.69
VRK3Q8IV63 FAM172BP-201ENST00000487497 1089 ntBASIC4.48□□□□□ -1.69
VRK3Q8IV63 RPL23AP72-201ENST00000492447 435 ntBASIC4.48□□□□□ -1.69
VRK3Q8IV63 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC4.48□□□□□ -1.69
VRK3Q8IV63 AC006390.1-201ENST00000508068 283 ntBASIC4.48□□□□□ -1.69
VRK3Q8IV63 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC4.48□□□□□ -1.69
VRK3Q8IV63 RNA5SP446-201ENST00000515955 82 ntBASIC4.48□□□□□ -1.69
VRK3Q8IV63 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC4.48□□□□□ -1.69
VRK3Q8IV63 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC4.48□□□□□ -1.69
VRK3Q8IV63 AC022882.1-201ENST00000532142 501 ntBASIC4.48□□□□□ -1.69
VRK3Q8IV63 AC008127.2-201ENST00000549925 1075 ntBASIC4.48□□□□□ -1.69
VRK3Q8IV63 MIR3671-201ENST00000580455 88 ntBASIC4.48□□□□□ -1.69
VRK3Q8IV63 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC4.48□□□□□ -1.69
VRK3Q8IV63 AC018638.8-201ENST00000588755 281 ntBASIC4.48□□□□□ -1.69
VRK3Q8IV63 AC011712.1-201ENST00000588959 234 ntBASIC4.48□□□□□ -1.69
VRK3Q8IV63 AC007621.1-201ENST00000604544 437 ntBASIC4.48□□□□□ -1.69
VRK3Q8IV63 RMST_3.1-201ENST00000611651 109 ntBASIC4.48□□□□□ -1.69
VRK3Q8IV63 LRRC2-AS1-202ENST00000614743 633 ntTSL 3 BASIC4.48□□□□□ -1.69
VRK3Q8IV63 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC4.48□□□□□ -1.69
VRK3Q8IV63 AC009268.2-201ENST00000621925 457 ntBASIC4.48□□□□□ -1.69
VRK3Q8IV63 AL158801.5-201ENST00000623123 465 ntBASIC4.48□□□□□ -1.69
VRK3Q8IV63 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC4.48□□□□□ -1.69
VRK3Q8IV63 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC4.48□□□□□ -1.69
VRK3Q8IV63 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC4.48□□□□□ -1.69
VRK3Q8IV63 MAPK10-263ENST00000641052 4307 ntBASIC4.48□□□□□ -1.69
VRK3Q8IV63 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
VRK3Q8IV63 AL645937.1-201ENST00000641739 1652 ntBASIC4.48□□□□□ -1.69
VRK3Q8IV63 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
VRK3Q8IV63 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC4.47□□□□□ -1.69
VRK3Q8IV63 SERPINA7-202ENST00000372563 1600 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
VRK3Q8IV63 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC4.47□□□□□ -1.69
VRK3Q8IV63 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.47□□□□□ -1.69
VRK3Q8IV63 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC4.47□□□□□ -1.69
VRK3Q8IV63 GNG5P1-201ENST00000255500 204 ntBASIC4.47□□□□□ -1.69
VRK3Q8IV63 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC4.47□□□□□ -1.69
VRK3Q8IV63 SLC30A7-201ENST00000357650 1281 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
VRK3Q8IV63 RN7SKP115-201ENST00000363177 317 ntBASIC4.47□□□□□ -1.69
VRK3Q8IV63 RNU6-1322P-201ENST00000364309 107 ntBASIC4.47□□□□□ -1.69
VRK3Q8IV63 SNORA71.2-201ENST00000364941 134 ntBASIC4.47□□□□□ -1.69
VRK3Q8IV63 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
VRK3Q8IV63 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
VRK3Q8IV63 Y_RNA.394-201ENST00000383942 103 ntBASIC4.47□□□□□ -1.69
VRK3Q8IV63 RPA3-203ENST00000401447 414 ntTSL 3 BASIC4.47□□□□□ -1.69
VRK3Q8IV63 AL356432.1-201ENST00000405809 419 ntBASIC4.47□□□□□ -1.69
VRK3Q8IV63 RNU6-272P-201ENST00000411028 104 ntBASIC4.47□□□□□ -1.69
VRK3Q8IV63 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC4.47□□□□□ -1.69
VRK3Q8IV63 AL590139.1-201ENST00000416267 400 ntBASIC4.47□□□□□ -1.69
VRK3Q8IV63 NANOGP6-201ENST00000429190 847 ntBASIC4.47□□□□□ -1.69
VRK3Q8IV63 DYNLL1P7-201ENST00000429273 258 ntBASIC4.47□□□□□ -1.69
VRK3Q8IV63 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC4.47□□□□□ -1.69
VRK3Q8IV63 SNRPEP7-201ENST00000438350 220 ntBASIC4.47□□□□□ -1.69
VRK3Q8IV63 RPL23AP93-201ENST00000440847 484 ntBASIC4.47□□□□□ -1.69
VRK3Q8IV63 RPL17P49-201ENST00000443728 411 ntBASIC4.47□□□□□ -1.69
VRK3Q8IV63 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC4.47□□□□□ -1.69
VRK3Q8IV63 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC4.47□□□□□ -1.69
VRK3Q8IV63 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC4.47□□□□□ -1.69
VRK3Q8IV63 MTND1P12-201ENST00000455231 147 ntBASIC4.47□□□□□ -1.69
VRK3Q8IV63 AL356289.2-201ENST00000455238 292 ntTSL 5 BASIC4.47□□□□□ -1.69
VRK3Q8IV63 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC4.47□□□□□ -1.69
VRK3Q8IV63 RPL23AP71-201ENST00000470966 469 ntBASIC4.47□□□□□ -1.69
VRK3Q8IV63 AC022795.1-201ENST00000473808 480 ntBASIC4.47□□□□□ -1.69
VRK3Q8IV63 AC096576.1-201ENST00000489014 359 ntBASIC4.47□□□□□ -1.69
VRK3Q8IV63 KRTAP5-14P-201ENST00000502328 121 ntBASIC4.47□□□□□ -1.69
VRK3Q8IV63 LINC01181-201ENST00000503718 556 ntTSL 4 BASIC4.47□□□□□ -1.69
VRK3Q8IV63 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC4.47□□□□□ -1.69
VRK3Q8IV63 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC4.47□□□□□ -1.69
VRK3Q8IV63 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC4.47□□□□□ -1.69
VRK3Q8IV63 Y_RNA.672-201ENST00000516289 104 ntBASIC4.47□□□□□ -1.69
VRK3Q8IV63 RNU6-445P-201ENST00000516949 107 ntBASIC4.47□□□□□ -1.69
VRK3Q8IV63 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC4.47□□□□□ -1.69
VRK3Q8IV63 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC4.47□□□□□ -1.69
VRK3Q8IV63 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
VRK3Q8IV63 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC4.47□□□□□ -1.69
VRK3Q8IV63 AC093027.1-201ENST00000546698 429 ntBASIC4.47□□□□□ -1.69
VRK3Q8IV63 AC063949.1-201ENST00000552900 865 ntBASIC4.47□□□□□ -1.69
VRK3Q8IV63 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC4.47□□□□□ -1.69
VRK3Q8IV63 AC097467.3-207ENST00000602249 725 ntTSL 5 BASIC4.47□□□□□ -1.69
VRK3Q8IV63 AC068790.5-201ENST00000602741 355 ntBASIC4.47□□□□□ -1.69
VRK3Q8IV63 YWHAQP7-201ENST00000603536 658 ntBASIC4.47□□□□□ -1.69
VRK3Q8IV63 AL365204.3-201ENST00000612448 685 ntBASIC4.47□□□□□ -1.69
VRK3Q8IV63 AP006248.2-201ENST00000623309 592 ntBASIC4.47□□□□□ -1.69
VRK3Q8IV63 AC021106.3-201ENST00000623925 531 ntBASIC4.47□□□□□ -1.69
VRK3Q8IV63 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC4.47□□□□□ -1.69
VRK3Q8IV63 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC4.47□□□□□ -1.69
VRK3Q8IV63 AL596275.2-204ENST00000641628 552 ntBASIC4.47□□□□□ -1.69
VRK3Q8IV63 AL596275.2-206ENST00000641957 626 ntBASIC4.47□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 163.8 ms