Protein–RNA interactions for Protein: Q7Z7G8

VPS13B, Vacuolar protein sorting-associated protein 13B, humanhuman

Predictions only

Length 4,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13BQ7Z7G8 SCARNA17.1-201ENST00000516211 143 ntBASIC1.49□□□□□ -2.17
VPS13BQ7Z7G8 SCARNA17.2-201ENST00000516334 143 ntBASIC1.49□□□□□ -2.17
VPS13BQ7Z7G8 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC1.49□□□□□ -2.17
VPS13BQ7Z7G8 AL137129.1-201ENST00000555937 720 ntTSL 4 BASIC1.49□□□□□ -2.17
VPS13BQ7Z7G8 AC090695.1-201ENST00000561269 1222 ntBASIC1.49□□□□□ -2.17
VPS13BQ7Z7G8 AC061975.8-201ENST00000587058 721 ntBASIC1.49□□□□□ -2.17
VPS13BQ7Z7G8 AC104237.2-201ENST00000612456 443 ntBASIC1.49□□□□□ -2.17
VPS13BQ7Z7G8 SCARNA17.4-201ENST00000614296 143 ntBASIC1.49□□□□□ -2.17
VPS13BQ7Z7G8 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC1.48□□□□□ -2.17
VPS13BQ7Z7G8 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC1.48□□□□□ -2.17
VPS13BQ7Z7G8 CLEC4A-201ENST00000229332 1281 ntAPPRIS P1 TSL 1 (best) BASIC1.48□□□□□ -2.17
VPS13BQ7Z7G8 AC007064.1-201ENST00000412238 351 ntBASIC1.48□□□□□ -2.17
VPS13BQ7Z7G8 RPS15AP6-201ENST00000420703 385 ntBASIC1.48□□□□□ -2.17
VPS13BQ7Z7G8 MLIP-IT1-201ENST00000441845 643 ntTSL 2 BASIC1.48□□□□□ -2.17
VPS13BQ7Z7G8 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC1.48□□□□□ -2.17
VPS13BQ7Z7G8 AC068587.2-201ENST00000478386 781 ntBASIC1.48□□□□□ -2.17
VPS13BQ7Z7G8 AC091544.1-201ENST00000484702 348 ntBASIC1.48□□□□□ -2.17
VPS13BQ7Z7G8 AC008696.2-201ENST00000503323 825 ntTSL 3 BASIC1.48□□□□□ -2.17
VPS13BQ7Z7G8 LINC02497-201ENST00000515292 507 ntTSL 3 BASIC1.48□□□□□ -2.17
VPS13BQ7Z7G8 PAFAH1B2-206ENST00000530272 850 ntTSL 1 (best) BASIC1.48□□□□□ -2.17
VPS13BQ7Z7G8 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC1.48□□□□□ -2.17
VPS13BQ7Z7G8 AC011494.1-201ENST00000596454 237 ntBASIC1.48□□□□□ -2.17
VPS13BQ7Z7G8 AP003117.2-201ENST00000606010 545 ntBASIC1.48□□□□□ -2.17
VPS13BQ7Z7G8 AC241377.1-201ENST00000619797 406 ntBASIC1.48□□□□□ -2.17
VPS13BQ7Z7G8 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC1.48□□□□□ -2.17
VPS13BQ7Z7G8 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC1.48□□□□□ -2.17
VPS13BQ7Z7G8 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC1.48□□□□□ -2.17
VPS13BQ7Z7G8 MIR499A-201ENST00000384903 122 ntBASIC1.48□□□□□ -2.17
VPS13BQ7Z7G8 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC1.48□□□□□ -2.17
VPS13BQ7Z7G8 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC1.48□□□□□ -2.17
VPS13BQ7Z7G8 AL024509.2-201ENST00000493462 493 ntBASIC1.48□□□□□ -2.17
VPS13BQ7Z7G8 AL109741.3-201ENST00000561748 592 ntBASIC1.48□□□□□ -2.17
VPS13BQ7Z7G8 MIR4635-201ENST00000583759 79 ntBASIC1.48□□□□□ -2.17
VPS13BQ7Z7G8 AL162233.1-201ENST00000620014 944 ntBASIC1.48□□□□□ -2.17
VPS13BQ7Z7G8 AC008505.1-203ENST00000637345 1766 ntTSL 5 BASIC1.48□□□□□ -2.17
VPS13BQ7Z7G8 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC1.48□□□□□ -2.17
VPS13BQ7Z7G8 AC069528.2-201ENST00000624849 1991 ntBASIC1.48□□□□□ -2.17
VPS13BQ7Z7G8 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC1.48□□□□□ -2.17
VPS13BQ7Z7G8 GCSAML-206ENST00000527084 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC1.48□□□□□ -2.17
VPS13BQ7Z7G8 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC1.48□□□□□ -2.17
VPS13BQ7Z7G8 MIR7-2-201ENST00000384970 110 ntBASIC1.48□□□□□ -2.17
VPS13BQ7Z7G8 AL023284.1-201ENST00000403956 276 ntBASIC1.48□□□□□ -2.17
VPS13BQ7Z7G8 OR9N1P-201ENST00000491296 333 ntBASIC1.48□□□□□ -2.17
VPS13BQ7Z7G8 RPS29P11-201ENST00000496507 171 ntBASIC1.48□□□□□ -2.17
VPS13BQ7Z7G8 MAL2-205ENST00000521048 575 ntTSL 4 BASIC1.48□□□□□ -2.17
VPS13BQ7Z7G8 SNRPGP18-201ENST00000553000 214 ntBASIC1.48□□□□□ -2.17
VPS13BQ7Z7G8 AC138207.6-203ENST00000581652 565 ntTSL 4 BASIC1.48□□□□□ -2.17
VPS13BQ7Z7G8 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC1.47□□□□□ -2.17
VPS13BQ7Z7G8 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.47□□□□□ -2.17
VPS13BQ7Z7G8 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC1.47□□□□□ -2.17
VPS13BQ7Z7G8 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC1.47□□□□□ -2.17
VPS13BQ7Z7G8 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC1.47□□□□□ -2.17
VPS13BQ7Z7G8 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC1.47□□□□□ -2.17
VPS13BQ7Z7G8 RNU6-661P-201ENST00000362409 107 ntBASIC1.47□□□□□ -2.17
VPS13BQ7Z7G8 SNORA25.9-201ENST00000365087 128 ntBASIC1.47□□□□□ -2.17
VPS13BQ7Z7G8 Y_RNA.338-201ENST00000365320 114 ntBASIC1.47□□□□□ -2.17
VPS13BQ7Z7G8 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC1.47□□□□□ -2.17
VPS13BQ7Z7G8 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC1.47□□□□□ -2.17
VPS13BQ7Z7G8 IPMKP1-201ENST00000425988 855 ntBASIC1.47□□□□□ -2.17
VPS13BQ7Z7G8 AC092013.1-201ENST00000438795 332 ntBASIC1.47□□□□□ -2.17
VPS13BQ7Z7G8 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC1.47□□□□□ -2.17
VPS13BQ7Z7G8 RPL23AP14-201ENST00000468281 468 ntBASIC1.47□□□□□ -2.17
VPS13BQ7Z7G8 AC117834.1-202ENST00000521203 561 ntTSL 4 BASIC1.47□□□□□ -2.17
VPS13BQ7Z7G8 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC1.47□□□□□ -2.17
VPS13BQ7Z7G8 RFPL1S-203ENST00000539579 330 ntBASIC1.47□□□□□ -2.17
VPS13BQ7Z7G8 MIR4644-201ENST00000579929 84 ntBASIC1.47□□□□□ -2.17
VPS13BQ7Z7G8 CSNK1G3-210ENST00000521364 2580 ntAPPRIS ALT2 TSL 2 BASIC1.47□□□□□ -2.17
VPS13BQ7Z7G8 GABPAP-201ENST00000419271 1356 ntBASIC1.47□□□□□ -2.17
VPS13BQ7Z7G8 AC093775.1-201ENST00000624154 1868 ntBASIC1.47□□□□□ -2.17
VPS13BQ7Z7G8 OR10AB1P-202ENST00000641219 1686 ntBASIC1.47□□□□□ -2.17
VPS13BQ7Z7G8 MIR21-201ENST00000362134 72 ntBASIC1.47□□□□□ -2.17
VPS13BQ7Z7G8 KLRC2-201ENST00000381901 1211 ntAPPRIS ALT2 TSL 5 BASIC1.47□□□□□ -2.17
VPS13BQ7Z7G8 GSTA9P-201ENST00000406231 611 ntBASIC1.47□□□□□ -2.17
VPS13BQ7Z7G8 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC1.47□□□□□ -2.17
VPS13BQ7Z7G8 AC104781.1-201ENST00000449838 397 ntTSL 3 BASIC1.47□□□□□ -2.17
VPS13BQ7Z7G8 AC105918.1-201ENST00000474399 838 ntBASIC1.47□□□□□ -2.17
VPS13BQ7Z7G8 RPL23AP11-201ENST00000475260 469 ntBASIC1.47□□□□□ -2.17
VPS13BQ7Z7G8 RAD51AP1P1-201ENST00000484195 1001 ntBASIC1.47□□□□□ -2.17
VPS13BQ7Z7G8 MEPE-206ENST00000511670 550 ntTSL 4 BASIC1.47□□□□□ -2.17
VPS13BQ7Z7G8 AC100870.1-201ENST00000522035 505 ntBASIC1.47□□□□□ -2.17
VPS13BQ7Z7G8 MAL2-203ENST00000534619 578 ntTSL 4 BASIC1.47□□□□□ -2.17
VPS13BQ7Z7G8 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC1.47□□□□□ -2.17
VPS13BQ7Z7G8 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC1.47□□□□□ -2.17
VPS13BQ7Z7G8 AC083760.1-201ENST00000589621 670 ntBASIC1.47□□□□□ -2.17
VPS13BQ7Z7G8 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC1.47□□□□□ -2.17
VPS13BQ7Z7G8 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.47□□□□□ -2.17
VPS13BQ7Z7G8 KLRC2-206ENST00000619500 883 ntTSL 5 BASIC1.47□□□□□ -2.17
VPS13BQ7Z7G8 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC1.47□□□□□ -2.17
VPS13BQ7Z7G8 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC1.47□□□□□ -2.17
VPS13BQ7Z7G8 EI24P2-201ENST00000397776 1076 ntBASIC1.47□□□□□ -2.17
VPS13BQ7Z7G8 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC1.47□□□□□ -2.17
VPS13BQ7Z7G8 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC1.47□□□□□ -2.17
VPS13BQ7Z7G8 C1orf143-201ENST00000443836 762 ntTSL 2 BASIC1.47□□□□□ -2.17
VPS13BQ7Z7G8 AC125238.1-201ENST00000448842 249 ntBASIC1.47□□□□□ -2.17
VPS13BQ7Z7G8 AC107222.1-201ENST00000510899 637 ntBASIC1.47□□□□□ -2.17
VPS13BQ7Z7G8 AC108729.3-201ENST00000513484 108 ntBASIC1.47□□□□□ -2.17
VPS13BQ7Z7G8 AP001207.1-201ENST00000524051 481 ntBASIC1.47□□□□□ -2.17
VPS13BQ7Z7G8 AC011611.5-201ENST00000552477 578 ntBASIC1.47□□□□□ -2.17
VPS13BQ7Z7G8 AC074029.1-201ENST00000552531 1044 ntBASIC1.47□□□□□ -2.17
VPS13BQ7Z7G8 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC1.47□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 99.2 ms