Protein–RNA interactions for Protein: Q6P4E1

CASC4, Protein CASC4, humanhuman

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4Q6P4E1 RPS29P7-201ENST00000439662 171 ntBASIC3.67□□□□□ -1.82
CASC4Q6P4E1 AC239367.2-201ENST00000447309 705 ntBASIC3.67□□□□□ -1.82
CASC4Q6P4E1 AC007327.1-201ENST00000447461 264 ntBASIC3.67□□□□□ -1.82
CASC4Q6P4E1 RPL39P6-201ENST00000448289 150 ntBASIC3.67□□□□□ -1.82
CASC4Q6P4E1 AL445669.2-201ENST00000454425 421 ntBASIC3.67□□□□□ -1.82
CASC4Q6P4E1 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
CASC4Q6P4E1 DUXAP8-207ENST00000456786 622 ntBASIC3.67□□□□□ -1.82
CASC4Q6P4E1 AL390783.1-203ENST00000457058 248 ntTSL 3 BASIC3.67□□□□□ -1.82
CASC4Q6P4E1 HMGB1P28-201ENST00000507778 552 ntBASIC3.67□□□□□ -1.82
CASC4Q6P4E1 TPT1P8-201ENST00000510120 555 ntBASIC3.67□□□□□ -1.82
CASC4Q6P4E1 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
CASC4Q6P4E1 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC3.67□□□□□ -1.82
CASC4Q6P4E1 RNU6-27P-201ENST00000516146 107 ntBASIC3.67□□□□□ -1.82
CASC4Q6P4E1 AC027701.1-201ENST00000520155 823 ntTSL 3 BASIC3.67□□□□□ -1.82
CASC4Q6P4E1 SLC2A13P1-201ENST00000531560 322 ntBASIC3.67□□□□□ -1.82
CASC4Q6P4E1 AL049838.1-201ENST00000563647 981 ntBASIC3.67□□□□□ -1.82
CASC4Q6P4E1 MMP2-AS1-202ENST00000569037 553 ntTSL 5 BASIC3.67□□□□□ -1.82
CASC4Q6P4E1 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC3.67□□□□□ -1.82
CASC4Q6P4E1 MIR5047-201ENST00000579212 100 ntBASIC3.67□□□□□ -1.82
CASC4Q6P4E1 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC3.67□□□□□ -1.82
CASC4Q6P4E1 RN7SL339P-201ENST00000580597 296 ntBASIC3.67□□□□□ -1.82
CASC4Q6P4E1 AC022916.3-201ENST00000592961 742 ntBASIC3.67□□□□□ -1.82
CASC4Q6P4E1 AC006077.1-201ENST00000604746 343 ntBASIC3.67□□□□□ -1.82
CASC4Q6P4E1 PRKCQ-AS1-208ENST00000608453 587 ntTSL 5 BASIC3.67□□□□□ -1.82
CASC4Q6P4E1 DUXAP10-204ENST00000612052 616 ntBASIC3.67□□□□□ -1.82
CASC4Q6P4E1 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC3.67□□□□□ -1.82
CASC4Q6P4E1 XIST_intron.1-201ENST00000619444 68 ntBASIC3.67□□□□□ -1.82
CASC4Q6P4E1 AC018755.4-201ENST00000619715 454 ntBASIC3.67□□□□□ -1.82
CASC4Q6P4E1 PPP2R2A-224ENST00000640787 318 ntTSL 5 BASIC3.67□□□□□ -1.82
CASC4Q6P4E1 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
CASC4Q6P4E1 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.67□□□□□ -1.82
CASC4Q6P4E1 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
CASC4Q6P4E1 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
CASC4Q6P4E1 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
CASC4Q6P4E1 TAS2R30-201ENST00000539585 1687 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
CASC4Q6P4E1 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
CASC4Q6P4E1 C11orf74-202ENST00000347206 633 ntAPPRIS ALT2 TSL 1 (best) BASIC3.66□□□□□ -1.82
CASC4Q6P4E1 TAS2R19-201ENST00000390673 1002 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
CASC4Q6P4E1 RNU6-1242P-201ENST00000391052 103 ntBASIC3.66□□□□□ -1.82
CASC4Q6P4E1 AL136116.1-201ENST00000403591 381 ntBASIC3.66□□□□□ -1.82
CASC4Q6P4E1 RN7SKP156-201ENST00000410308 342 ntBASIC3.66□□□□□ -1.82
CASC4Q6P4E1 AL513175.2-201ENST00000422071 443 ntBASIC3.66□□□□□ -1.82
CASC4Q6P4E1 ZDHHC20P2-201ENST00000424108 429 ntBASIC3.66□□□□□ -1.82
CASC4Q6P4E1 USP9YP24-201ENST00000434374 697 ntBASIC3.66□□□□□ -1.82
CASC4Q6P4E1 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC3.66□□□□□ -1.82
CASC4Q6P4E1 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC3.66□□□□□ -1.82
CASC4Q6P4E1 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC3.66□□□□□ -1.82
CASC4Q6P4E1 USP9YP17-201ENST00000444617 696 ntBASIC3.66□□□□□ -1.82
CASC4Q6P4E1 AC034228.3-201ENST00000446275 562 ntTSL 3 BASIC3.66□□□□□ -1.82
CASC4Q6P4E1 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC3.66□□□□□ -1.82
CASC4Q6P4E1 USP9YP34-201ENST00000453983 808 ntBASIC3.66□□□□□ -1.82
CASC4Q6P4E1 AC092155.2-201ENST00000454675 477 ntBASIC3.66□□□□□ -1.82
CASC4Q6P4E1 HMGB1P25-201ENST00000468402 607 ntBASIC3.66□□□□□ -1.82
CASC4Q6P4E1 RPS15AP17-201ENST00000470598 390 ntBASIC3.66□□□□□ -1.82
CASC4Q6P4E1 AL049830.2-201ENST00000480072 201 ntBASIC3.66□□□□□ -1.82
CASC4Q6P4E1 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC3.66□□□□□ -1.82
CASC4Q6P4E1 THAP6-203ENST00000502620 582 ntTSL 3 BASIC3.66□□□□□ -1.82
CASC4Q6P4E1 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC3.66□□□□□ -1.82
CASC4Q6P4E1 SNORA31.20-201ENST00000517111 133 ntBASIC3.66□□□□□ -1.82
CASC4Q6P4E1 AC104986.1-201ENST00000517978 436 ntBASIC3.66□□□□□ -1.82
CASC4Q6P4E1 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC3.66□□□□□ -1.82
CASC4Q6P4E1 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC3.66□□□□□ -1.82
CASC4Q6P4E1 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC3.66□□□□□ -1.82
CASC4Q6P4E1 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC3.66□□□□□ -1.82
CASC4Q6P4E1 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC3.66□□□□□ -1.82
CASC4Q6P4E1 AL032819.1-201ENST00000568554 379 ntTSL 3 BASIC3.66□□□□□ -1.82
CASC4Q6P4E1 MTND1P8-201ENST00000571424 950 ntBASIC3.66□□□□□ -1.82
CASC4Q6P4E1 MTCO2P2-201ENST00000591258 225 ntBASIC3.66□□□□□ -1.82
CASC4Q6P4E1 BNIP3P24-201ENST00000593398 557 ntBASIC3.66□□□□□ -1.82
CASC4Q6P4E1 AC245036.5-201ENST00000596330 847 ntBASIC3.66□□□□□ -1.82
CASC4Q6P4E1 AC069304.2-201ENST00000605154 435 ntBASIC3.66□□□□□ -1.82
CASC4Q6P4E1 AL034351.1-201ENST00000605288 668 ntBASIC3.66□□□□□ -1.82
CASC4Q6P4E1 AC128687.1-201ENST00000605304 619 ntBASIC3.66□□□□□ -1.82
CASC4Q6P4E1 OR5H6-201ENST00000615035 1113 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
CASC4Q6P4E1 OR8H2-202ENST00000618136 1038 ntAPPRIS ALT1 BASIC3.66□□□□□ -1.82
CASC4Q6P4E1 AC112200.1-201ENST00000625015 234 ntBASIC3.66□□□□□ -1.82
CASC4Q6P4E1 AC091925.2-201ENST00000625059 256 ntBASIC3.66□□□□□ -1.82
CASC4Q6P4E1 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC3.66□□□□□ -1.82
CASC4Q6P4E1 MIR1322-201ENST00000638013 71 ntBASIC3.66□□□□□ -1.82
CASC4Q6P4E1 OR5H6-202ENST00000641416 1032 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
CASC4Q6P4E1 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
CASC4Q6P4E1 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC3.66□□□□□ -1.82
CASC4Q6P4E1 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
CASC4Q6P4E1 RPS4XP5-202ENST00000449995 1334 ntBASIC3.66□□□□□ -1.82
CASC4Q6P4E1 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.66□□□□□ -1.82
CASC4Q6P4E1 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC3.65□□□□□ -1.82
CASC4Q6P4E1 AP001350.1-201ENST00000601906 1524 ntBASIC3.65□□□□□ -1.82
CASC4Q6P4E1 AC138915.3-201ENST00000562908 1389 ntBASIC3.65□□□□□ -1.82
CASC4Q6P4E1 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC3.65□□□□□ -1.82
CASC4Q6P4E1 RNU6-560P-201ENST00000364007 108 ntBASIC3.65□□□□□ -1.83
CASC4Q6P4E1 RNA5SP42-201ENST00000364278 115 ntBASIC3.65□□□□□ -1.83
CASC4Q6P4E1 SNORD116.1-201ENST00000365628 92 ntBASIC3.65□□□□□ -1.83
CASC4Q6P4E1 SNORA57.1-201ENST00000391227 145 ntBASIC3.65□□□□□ -1.83
CASC4Q6P4E1 RPL7P60-201ENST00000397636 735 ntBASIC3.65□□□□□ -1.83
CASC4Q6P4E1 AIMP1P1-201ENST00000418670 937 ntBASIC3.65□□□□□ -1.83
CASC4Q6P4E1 AC012065.2-201ENST00000421295 375 ntBASIC3.65□□□□□ -1.83
CASC4Q6P4E1 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC3.65□□□□□ -1.83
CASC4Q6P4E1 AL645638.1-201ENST00000440519 361 ntBASIC3.65□□□□□ -1.83
CASC4Q6P4E1 AF127577.1-201ENST00000446301 562 ntTSL 3 BASIC3.65□□□□□ -1.83
CASC4Q6P4E1 TRGVB-201ENST00000453257 471 ntBASIC3.65□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 99 ms