Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 UGDH-205ENST00000506179 3021 ntAPPRIS P1 TSL 5 BASIC6.84□□□□□ -1.32
VARS2Q5ST30 FOXJ3-204ENST00000372572 5352 ntAPPRIS P3 TSL 1 (best) BASIC6.84□□□□□ -1.32
VARS2Q5ST30 PLCH1-206ENST00000494598 3525 ntTSL 5 BASIC6.84□□□□□ -1.32
VARS2Q5ST30 HSDL2-201ENST00000398803 2983 ntTSL 1 (best) BASIC6.84□□□□□ -1.32
VARS2Q5ST30 AC027088.4-201ENST00000611559 1947 ntBASIC6.84□□□□□ -1.32
VARS2Q5ST30 FOXJ3-209ENST00000545068 5165 ntAPPRIS P3 TSL 5 BASIC6.83□□□□□ -1.32
VARS2Q5ST30 PLCB4-202ENST00000378473 5619 ntAPPRIS ALT1 TSL 1 (best) BASIC6.83□□□□□ -1.32
VARS2Q5ST30 ZNF562-202ENST00000453372 2111 ntAPPRIS P3 TSL 3 BASIC6.83□□□□□ -1.32
VARS2Q5ST30 ATP1A1-203ENST00000369496 3572 ntTSL 2 BASIC6.83□□□□□ -1.32
VARS2Q5ST30 PNPLA4-204ENST00000537427 2559 ntTSL 2 BASIC6.83□□□□□ -1.32
VARS2Q5ST30 N4BP2-201ENST00000261435 9744 ntAPPRIS P1 TSL 5 BASIC6.83□□□□□ -1.32
VARS2Q5ST30 APOL4-203ENST00000352371 3227 ntAPPRIS P4 TSL 1 (best) BASIC6.83□□□□□ -1.32
VARS2Q5ST30 CEACAM5-202ENST00000398599 2451 ntAPPRIS ALT2 TSL 5 BASIC6.83□□□□□ -1.32
VARS2Q5ST30 AC068870.1-201ENST00000563737 2455 ntBASIC6.83□□□□□ -1.32
VARS2Q5ST30 DCP1A-206ENST00000610213 5994 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
VARS2Q5ST30 SNORD16-201ENST00000362803 99 ntBASIC6.83□□□□□ -1.32
VARS2Q5ST30 RN7SKP81-201ENST00000365603 331 ntBASIC6.83□□□□□ -1.32
VARS2Q5ST30 SMIM11P1-201ENST00000369586 178 ntBASIC6.83□□□□□ -1.32
VARS2Q5ST30 Y_RNA.569-201ENST00000384749 103 ntBASIC6.83□□□□□ -1.32
VARS2Q5ST30 AL109610.1-201ENST00000414598 431 ntTSL 3 BASIC6.83□□□□□ -1.32
VARS2Q5ST30 AL390729.2-201ENST00000416137 156 ntBASIC6.83□□□□□ -1.32
VARS2Q5ST30 LINC00276-201ENST00000417751 596 ntTSL 2 BASIC6.83□□□□□ -1.32
VARS2Q5ST30 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC6.83□□□□□ -1.32
VARS2Q5ST30 RPL7AP14-201ENST00000424041 802 ntBASIC6.83□□□□□ -1.32
VARS2Q5ST30 FABP5P13-201ENST00000452144 328 ntBASIC6.83□□□□□ -1.32
VARS2Q5ST30 RPS27AP1-201ENST00000475545 471 ntBASIC6.83□□□□□ -1.32
VARS2Q5ST30 ATP5LP5-201ENST00000483050 299 ntBASIC6.83□□□□□ -1.32
VARS2Q5ST30 RAC1P5-201ENST00000512182 576 ntBASIC6.83□□□□□ -1.32
VARS2Q5ST30 LINCR-0001-202ENST00000518098 524 ntTSL 4 BASIC6.83□□□□□ -1.32
VARS2Q5ST30 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC6.83□□□□□ -1.32
VARS2Q5ST30 ERHP1-201ENST00000523006 310 ntBASIC6.83□□□□□ -1.32
VARS2Q5ST30 IGLV3-6-201ENST00000523937 250 ntBASIC6.83□□□□□ -1.32
VARS2Q5ST30 HMGB1P42-201ENST00000532126 553 ntBASIC6.83□□□□□ -1.32
VARS2Q5ST30 AC010325.1-202ENST00000562076 279 ntAPPRIS ALT2 TSL 1 (best) BASIC6.83□□□□□ -1.32
VARS2Q5ST30 AC008521.2-201ENST00000591021 259 ntBASIC6.83□□□□□ -1.32
VARS2Q5ST30 BRDTP1-201ENST00000605735 677 ntBASIC6.83□□□□□ -1.32
VARS2Q5ST30 SNORD113-5-201ENST00000607261 78 ntBASIC6.83□□□□□ -1.32
VARS2Q5ST30 AL049539.1-201ENST00000611964 459 ntBASIC6.83□□□□□ -1.32
VARS2Q5ST30 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC6.83□□□□□ -1.32
VARS2Q5ST30 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC6.83□□□□□ -1.32
VARS2Q5ST30 U4.7-201ENST00000638126 106 ntBASIC6.83□□□□□ -1.32
VARS2Q5ST30 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC6.83□□□□□ -1.32
VARS2Q5ST30 ZNF566-202ENST00000424129 2644 ntAPPRIS P3 TSL 2 BASIC6.83□□□□□ -1.32
VARS2Q5ST30 ERG-202ENST00000398897 4651 ntTSL 5 BASIC6.83□□□□□ -1.32
VARS2Q5ST30 ZNF836-201ENST00000322146 2811 ntAPPRIS ALT2 TSL 5 BASIC6.83□□□□□ -1.32
VARS2Q5ST30 AAK1-203ENST00000409085 11345 ntAPPRIS P1 TSL 5 BASIC6.83□□□□□ -1.32
VARS2Q5ST30 AC062022.1-201ENST00000451026 1684 ntBASIC6.83□□□□□ -1.32
VARS2Q5ST30 AL021877.2-201ENST00000624442 10684 ntBASIC6.82□□□□□ -1.32
VARS2Q5ST30 GSTCD-202ENST00000394728 2416 ntAPPRIS P1 TSL 5 BASIC6.82□□□□□ -1.32
VARS2Q5ST30 ACPP-202ENST00000351273 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC6.82□□□□□ -1.32
VARS2Q5ST30 ADAM5-208ENST00000505455 1998 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
VARS2Q5ST30 TBC1D15-201ENST00000319106 2159 ntTSL 2 BASIC6.82□□□□□ -1.32
VARS2Q5ST30 KLHL2-204ENST00000506761 2169 ntTSL 5 BASIC6.82□□□□□ -1.32
VARS2Q5ST30 SPEF2-202ENST00000356031 5681 ntAPPRIS P2 TSL 1 (best) BASIC6.82□□□□□ -1.32
VARS2Q5ST30 TM9SF4-202ENST00000398022 3978 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
VARS2Q5ST30 CACNB2-215ENST00000615785 3707 ntTSL 5 BASIC6.82□□□□□ -1.32
VARS2Q5ST30 JPX-212ENST00000639185 9658 ntTSL 5 BASIC6.82□□□□□ -1.32
VARS2Q5ST30 PIGN-207ENST00000586566 3891 ntTSL 5 BASIC6.82□□□□□ -1.32
VARS2Q5ST30 TRIM34-204ENST00000514226 2493 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
VARS2Q5ST30 OR5T2-202ENST00000641661 2062 ntAPPRIS ALT2 BASIC6.82□□□□□ -1.32
VARS2Q5ST30 TCF7L2-218ENST00000538897 4000 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
VARS2Q5ST30 Y_RNA.286-201ENST00000364813 102 ntBASIC6.82□□□□□ -1.32
VARS2Q5ST30 Y_RNA.358-201ENST00000365491 99 ntBASIC6.82□□□□□ -1.32
VARS2Q5ST30 RNU6-933P-201ENST00000384424 107 ntBASIC6.82□□□□□ -1.32
VARS2Q5ST30 RNU6-45P-201ENST00000384471 107 ntBASIC6.82□□□□□ -1.32
VARS2Q5ST30 AL121885.3-201ENST00000422833 115 ntTSL 3 BASIC6.82□□□□□ -1.32
VARS2Q5ST30 CYCSP52-201ENST00000422857 310 ntBASIC6.82□□□□□ -1.32
VARS2Q5ST30 AL354707.3-201ENST00000427308 331 ntBASIC6.82□□□□□ -1.32
VARS2Q5ST30 AC073063.1-201ENST00000434352 607 ntBASIC6.82□□□□□ -1.32
VARS2Q5ST30 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC6.82□□□□□ -1.32
VARS2Q5ST30 AL133351.3-201ENST00000454998 193 ntBASIC6.82□□□□□ -1.32
VARS2Q5ST30 AC022034.3-201ENST00000471393 478 ntBASIC6.82□□□□□ -1.32
VARS2Q5ST30 RN7SL643P-201ENST00000471845 291 ntBASIC6.82□□□□□ -1.32
VARS2Q5ST30 AC026254.2-201ENST00000475295 371 ntBASIC6.82□□□□□ -1.32
VARS2Q5ST30 AP002453.1-201ENST00000492327 668 ntBASIC6.82□□□□□ -1.32
VARS2Q5ST30 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC6.82□□□□□ -1.32
VARS2Q5ST30 SNORA25.12-201ENST00000516202 82 ntBASIC6.82□□□□□ -1.32
VARS2Q5ST30 AC051619.2-201ENST00000559063 397 ntBASIC6.82□□□□□ -1.32
VARS2Q5ST30 SNORA74.4-201ENST00000607595 199 ntBASIC6.82□□□□□ -1.32
VARS2Q5ST30 AC023043.4-201ENST00000612081 449 ntBASIC6.82□□□□□ -1.32
VARS2Q5ST30 VRK2-206ENST00000435505 2446 ntAPPRIS P3 TSL 1 (best) BASIC6.82□□□□□ -1.32
VARS2Q5ST30 ZNF559-ZNF177-203ENST00000541595 2435 ntAPPRIS P3 TSL 2 BASIC6.82□□□□□ -1.32
VARS2Q5ST30 AC016583.1-201ENST00000624221 2431 ntBASIC6.82□□□□□ -1.32
VARS2Q5ST30 MSR1-202ENST00000350896 3572 ntTSL 5 BASIC6.82□□□□□ -1.32
VARS2Q5ST30 LGI1-228ENST00000637689 1802 ntTSL 5 BASIC6.82□□□□□ -1.32
VARS2Q5ST30 FTO-206ENST00000471389 11766 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
VARS2Q5ST30 TMEM67-205ENST00000453321 4651 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
VARS2Q5ST30 LRRC37A3-203ENST00000339474 2589 ntTSL 2 BASIC6.82□□□□□ -1.32
VARS2Q5ST30 PHLPP2-201ENST00000393524 8467 ntTSL 2 BASIC6.82□□□□□ -1.32
VARS2Q5ST30 AC090673.1-202ENST00000356215 4617 ntTSL 2 BASIC6.82□□□□□ -1.32
VARS2Q5ST30 TRIM36-209ENST00000514154 1952 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
VARS2Q5ST30 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC6.82□□□□□ -1.32
VARS2Q5ST30 TGFB2-202ENST00000366930 4969 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
VARS2Q5ST30 IGF2R-201ENST00000356956 14044 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
VARS2Q5ST30 ZRANB3-210ENST00000536680 6943 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
VARS2Q5ST30 LINC00598-211ENST00000636621 3241 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
VARS2Q5ST30 FABP2-201ENST00000274024 2478 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
VARS2Q5ST30 PHEX-AS1-201ENST00000424650 1906 ntTSL 2 BASIC6.82□□□□□ -1.32
VARS2Q5ST30 ZNF177-202ENST00000589262 1920 ntAPPRIS ALT2 TSL 2 BASIC6.82□□□□□ -1.32
VARS2Q5ST30 KCNJ15-220ENST00000612702 3046 ntAPPRIS P1 TSL 4 BASIC6.82□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 93.2 ms