Protein–RNA interactions for Protein: Q53GD3

SLC44A4, Choline transporter-like protein 4, humanhuman

Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A4Q53GD3 MIR320C1-201ENST00000408566 88 ntBASIC4.65□□□□□ -1.67
SLC44A4Q53GD3 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
SLC44A4Q53GD3 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC4.65□□□□□ -1.67
SLC44A4Q53GD3 PDSS1P1-201ENST00000422953 1114 ntBASIC4.65□□□□□ -1.67
SLC44A4Q53GD3 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC4.65□□□□□ -1.67
SLC44A4Q53GD3 SLC44A3-AS1-205ENST00000424505 612 ntBASIC4.65□□□□□ -1.67
SLC44A4Q53GD3 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC4.65□□□□□ -1.67
SLC44A4Q53GD3 SNRPEP7-201ENST00000438350 220 ntBASIC4.65□□□□□ -1.67
SLC44A4Q53GD3 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC4.65□□□□□ -1.67
SLC44A4Q53GD3 USP9YP34-201ENST00000453983 808 ntBASIC4.65□□□□□ -1.67
SLC44A4Q53GD3 AC010884.1-201ENST00000456519 642 ntTSL 3 BASIC4.65□□□□□ -1.67
SLC44A4Q53GD3 AC034236.1-201ENST00000469891 373 ntBASIC4.65□□□□□ -1.67
SLC44A4Q53GD3 RPL31P50-201ENST00000471002 296 ntBASIC4.65□□□□□ -1.67
SLC44A4Q53GD3 AC022034.3-201ENST00000471393 478 ntBASIC4.65□□□□□ -1.67
SLC44A4Q53GD3 FAM172BP-201ENST00000487497 1089 ntBASIC4.65□□□□□ -1.67
SLC44A4Q53GD3 RNF138P1-201ENST00000502765 546 ntBASIC4.65□□□□□ -1.67
SLC44A4Q53GD3 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
SLC44A4Q53GD3 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC4.65□□□□□ -1.67
SLC44A4Q53GD3 AF131216.2-201ENST00000512316 564 ntBASIC4.65□□□□□ -1.67
SLC44A4Q53GD3 AC008549.1-201ENST00000512900 643 ntBASIC4.65□□□□□ -1.67
SLC44A4Q53GD3 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC4.65□□□□□ -1.67
SLC44A4Q53GD3 SNORD116-26-201ENST00000516006 96 ntBASIC4.65□□□□□ -1.67
SLC44A4Q53GD3 RNU6-405P-201ENST00000516637 110 ntBASIC4.65□□□□□ -1.67
SLC44A4Q53GD3 AC025881.1-201ENST00000518851 512 ntBASIC4.65□□□□□ -1.67
SLC44A4Q53GD3 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC4.65□□□□□ -1.67
SLC44A4Q53GD3 AP004247.1-201ENST00000531556 1289 ntBASIC4.65□□□□□ -1.67
SLC44A4Q53GD3 AC116535.2-201ENST00000532365 441 ntTSL 5 BASIC4.65□□□□□ -1.67
SLC44A4Q53GD3 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC4.65□□□□□ -1.67
SLC44A4Q53GD3 AC087481.2-201ENST00000565492 330 ntBASIC4.65□□□□□ -1.67
SLC44A4Q53GD3 AC091489.2-201ENST00000566263 604 ntBASIC4.65□□□□□ -1.67
SLC44A4Q53GD3 MIR5186-201ENST00000577504 120 ntBASIC4.65□□□□□ -1.67
SLC44A4Q53GD3 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC4.65□□□□□ -1.67
SLC44A4Q53GD3 MIR544B-201ENST00000582372 78 ntBASIC4.65□□□□□ -1.67
SLC44A4Q53GD3 AC067852.4-201ENST00000590314 478 ntBASIC4.65□□□□□ -1.67
SLC44A4Q53GD3 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
SLC44A4Q53GD3 AC026368.1-201ENST00000614934 690 ntBASIC4.65□□□□□ -1.67
SLC44A4Q53GD3 CYP3A51P-201ENST00000633513 256 ntBASIC4.65□□□□□ -1.67
SLC44A4Q53GD3 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC4.65□□□□□ -1.67
SLC44A4Q53GD3 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
SLC44A4Q53GD3 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
SLC44A4Q53GD3 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
SLC44A4Q53GD3 AL445487.1-201ENST00000415694 1580 ntBASIC4.65□□□□□ -1.67
SLC44A4Q53GD3 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC4.65□□□□□ -1.67
SLC44A4Q53GD3 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC4.65□□□□□ -1.67
SLC44A4Q53GD3 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
SLC44A4Q53GD3 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
SLC44A4Q53GD3 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC4.64□□□□□ -1.67
SLC44A4Q53GD3 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
SLC44A4Q53GD3 SPRR2C-201ENST00000290702 219 ntBASIC4.64□□□□□ -1.67
SLC44A4Q53GD3 OR5P1P-201ENST00000299512 925 ntBASIC4.64□□□□□ -1.67
SLC44A4Q53GD3 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
SLC44A4Q53GD3 OR6C2-201ENST00000322678 939 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
SLC44A4Q53GD3 RNU1-130P-201ENST00000363930 160 ntBASIC4.64□□□□□ -1.67
SLC44A4Q53GD3 AL031679.1-201ENST00000400616 525 ntBASIC4.64□□□□□ -1.67
SLC44A4Q53GD3 AL512430.2-201ENST00000406786 339 ntBASIC4.64□□□□□ -1.67
SLC44A4Q53GD3 RNU6-628P-201ENST00000410675 107 ntBASIC4.64□□□□□ -1.67
SLC44A4Q53GD3 AC007899.1-201ENST00000412776 775 ntBASIC4.64□□□□□ -1.67
SLC44A4Q53GD3 MTND1P21-201ENST00000412991 285 ntBASIC4.64□□□□□ -1.67
SLC44A4Q53GD3 AC004552.1-201ENST00000419089 348 ntBASIC4.64□□□□□ -1.67
SLC44A4Q53GD3 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC4.64□□□□□ -1.67
SLC44A4Q53GD3 RPS27AP14-201ENST00000422868 454 ntBASIC4.64□□□□□ -1.67
SLC44A4Q53GD3 RPL23AP38-201ENST00000423801 469 ntBASIC4.64□□□□□ -1.67
SLC44A4Q53GD3 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC4.64□□□□□ -1.67
SLC44A4Q53GD3 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC4.64□□□□□ -1.67
SLC44A4Q53GD3 AL139415.2-201ENST00000431968 163 ntBASIC4.64□□□□□ -1.67
SLC44A4Q53GD3 RPS26P2-201ENST00000440331 348 ntBASIC4.64□□□□□ -1.67
SLC44A4Q53GD3 GDI2P2-201ENST00000445131 608 ntBASIC4.64□□□□□ -1.67
SLC44A4Q53GD3 TDGF1P1-201ENST00000445734 527 ntBASIC4.64□□□□□ -1.67
SLC44A4Q53GD3 AC002381.1-201ENST00000447049 280 ntBASIC4.64□□□□□ -1.67
SLC44A4Q53GD3 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC4.64□□□□□ -1.67
SLC44A4Q53GD3 ARPC3P5-201ENST00000448802 534 ntBASIC4.64□□□□□ -1.67
SLC44A4Q53GD3 RPS26P3-201ENST00000470205 348 ntBASIC4.64□□□□□ -1.67
SLC44A4Q53GD3 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC4.64□□□□□ -1.67
SLC44A4Q53GD3 AP000797.1-201ENST00000478870 387 ntBASIC4.64□□□□□ -1.67
SLC44A4Q53GD3 AC107021.1-202ENST00000480247 555 ntTSL 5 BASIC4.64□□□□□ -1.67
SLC44A4Q53GD3 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC4.64□□□□□ -1.67
SLC44A4Q53GD3 AC090543.2-201ENST00000483963 348 ntBASIC4.64□□□□□ -1.67
SLC44A4Q53GD3 AC041039.1-201ENST00000485656 536 ntBASIC4.64□□□□□ -1.67
SLC44A4Q53GD3 AC004057.1-201ENST00000485827 348 ntBASIC4.64□□□□□ -1.67
SLC44A4Q53GD3 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC4.64□□□□□ -1.67
SLC44A4Q53GD3 FABP5P5-201ENST00000515537 406 ntBASIC4.64□□□□□ -1.67
SLC44A4Q53GD3 AC107373.1-201ENST00000522570 603 ntTSL 3 BASIC4.64□□□□□ -1.67
SLC44A4Q53GD3 PTP4A1P6-201ENST00000531034 478 ntBASIC4.64□□□□□ -1.67
SLC44A4Q53GD3 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC4.64□□□□□ -1.67
SLC44A4Q53GD3 AC068135.2-201ENST00000569293 1028 ntBASIC4.64□□□□□ -1.67
SLC44A4Q53GD3 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC4.64□□□□□ -1.67
SLC44A4Q53GD3 BBIP1P1-201ENST00000602999 279 ntBASIC4.64□□□□□ -1.67
SLC44A4Q53GD3 AP000403.1-201ENST00000603349 851 ntBASIC4.64□□□□□ -1.67
SLC44A4Q53GD3 AC126118.1-201ENST00000607744 628 ntBASIC4.64□□□□□ -1.67
SLC44A4Q53GD3 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC4.64□□□□□ -1.67
SLC44A4Q53GD3 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC4.64□□□□□ -1.67
SLC44A4Q53GD3 C7orf66-201ENST00000624695 435 ntTSL 2 BASIC4.64□□□□□ -1.67
SLC44A4Q53GD3 TEX41-256ENST00000626411 368 ntTSL 5 BASIC4.64□□□□□ -1.67
SLC44A4Q53GD3 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC4.64□□□□□ -1.67
SLC44A4Q53GD3 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
SLC44A4Q53GD3 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
SLC44A4Q53GD3 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
SLC44A4Q53GD3 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC4.64□□□□□ -1.67
SLC44A4Q53GD3 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC4.64□□□□□ -1.67
SLC44A4Q53GD3 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 130.4 ms