Protein–RNA interactions for Protein: Q12950

FOXD4, Forkhead box protein D4, humanhuman

Predicted RBP Predictions only

Length 439 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXD4Q12950 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC4.23□□□□□ -1.73
FOXD4Q12950 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC4.23□□□□□ -1.73
FOXD4Q12950 EOGT-210ENST00000615922 1931 ntBASIC4.23□□□□□ -1.73
FOXD4Q12950 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
FOXD4Q12950 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC4.23□□□□□ -1.73
FOXD4Q12950 FRG1BP-201ENST00000278882 761 ntBASIC4.23□□□□□ -1.73
FOXD4Q12950 OR6C2-201ENST00000322678 939 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
FOXD4Q12950 PARD3-204ENST00000374768 799 ntTSL 3 BASIC4.23□□□□□ -1.73
FOXD4Q12950 SNORA37-201ENST00000384504 129 ntBASIC4.23□□□□□ -1.73
FOXD4Q12950 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
FOXD4Q12950 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC4.23□□□□□ -1.73
FOXD4Q12950 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC4.23□□□□□ -1.73
FOXD4Q12950 TRBV24OR9-2-201ENST00000416632 435 ntBASIC4.23□□□□□ -1.73
FOXD4Q12950 CCDC58P2-201ENST00000417131 366 ntBASIC4.23□□□□□ -1.73
FOXD4Q12950 UBE2D3P2-201ENST00000424409 445 ntBASIC4.23□□□□□ -1.73
FOXD4Q12950 USP9YP36-201ENST00000424581 829 ntBASIC4.23□□□□□ -1.73
FOXD4Q12950 MTATP6P4-201ENST00000427725 675 ntBASIC4.23□□□□□ -1.73
FOXD4Q12950 AC079780.1-201ENST00000428259 207 ntBASIC4.23□□□□□ -1.73
FOXD4Q12950 UBE2D3P1-201ENST00000436669 444 ntBASIC4.23□□□□□ -1.73
FOXD4Q12950 RPL18AP17-201ENST00000455326 198 ntBASIC4.23□□□□□ -1.73
FOXD4Q12950 AC034236.1-201ENST00000469891 373 ntBASIC4.23□□□□□ -1.73
FOXD4Q12950 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
FOXD4Q12950 AC104763.1-201ENST00000475274 360 ntBASIC4.23□□□□□ -1.73
FOXD4Q12950 RPS3AP22-201ENST00000488297 769 ntBASIC4.23□□□□□ -1.73
FOXD4Q12950 RPL7P38-201ENST00000488396 739 ntBASIC4.23□□□□□ -1.73
FOXD4Q12950 DEFB109F-201ENST00000491870 277 ntBASIC4.23□□□□□ -1.73
FOXD4Q12950 AC147055.4-201ENST00000504399 745 ntBASIC4.23□□□□□ -1.73
FOXD4Q12950 AC093840.1-201ENST00000511599 336 ntBASIC4.23□□□□□ -1.73
FOXD4Q12950 RNU6-1129P-201ENST00000515964 104 ntBASIC4.23□□□□□ -1.73
FOXD4Q12950 RNU6-759P-201ENST00000516740 103 ntBASIC4.23□□□□□ -1.73
FOXD4Q12950 ZFPM2-AS1-204ENST00000520433 748 ntTSL 3 BASIC4.23□□□□□ -1.73
FOXD4Q12950 IGLV3-26-201ENST00000520756 302 ntBASIC4.23□□□□□ -1.73
FOXD4Q12950 AC022861.1-201ENST00000522981 663 ntBASIC4.23□□□□□ -1.73
FOXD4Q12950 NRG3-205ENST00000537893 1174 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
FOXD4Q12950 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC4.23□□□□□ -1.73
FOXD4Q12950 AC103876.1-201ENST00000568634 418 ntTSL 3 BASIC4.23□□□□□ -1.73
FOXD4Q12950 AC023575.1-201ENST00000580510 358 ntBASIC4.23□□□□□ -1.73
FOXD4Q12950 VN1R90P-201ENST00000595717 726 ntBASIC4.23□□□□□ -1.73
FOXD4Q12950 AC013444.2-201ENST00000603317 787 ntBASIC4.23□□□□□ -1.73
FOXD4Q12950 MIR6716-201ENST00000613413 80 ntBASIC4.23□□□□□ -1.73
FOXD4Q12950 AL359715.5-201ENST00000623431 443 ntBASIC4.23□□□□□ -1.73
FOXD4Q12950 AC008785.1-201ENST00000624475 456 ntBASIC4.23□□□□□ -1.73
FOXD4Q12950 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
FOXD4Q12950 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC4.23□□□□□ -1.73
FOXD4Q12950 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC4.23□□□□□ -1.73
FOXD4Q12950 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC4.23□□□□□ -1.73
FOXD4Q12950 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC4.23□□□□□ -1.73
FOXD4Q12950 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
FOXD4Q12950 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
FOXD4Q12950 AC010928.1-201ENST00000592477 1447 ntBASIC4.22□□□□□ -1.73
FOXD4Q12950 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC4.22□□□□□ -1.73
FOXD4Q12950 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
FOXD4Q12950 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
FOXD4Q12950 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
FOXD4Q12950 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
FOXD4Q12950 RNU1-20P-201ENST00000363314 162 ntBASIC4.22□□□□□ -1.73
FOXD4Q12950 R3HCC1L-204ENST00000370586 941 ntTSL 3 BASIC4.22□□□□□ -1.73
FOXD4Q12950 MIR134-201ENST00000385258 73 ntBASIC4.22□□□□□ -1.73
FOXD4Q12950 AC025750.1-201ENST00000399891 379 ntBASIC4.22□□□□□ -1.73
FOXD4Q12950 Z98941.1-201ENST00000407764 100 ntBASIC4.22□□□□□ -1.73
FOXD4Q12950 OR8F1P-201ENST00000425243 930 ntBASIC4.22□□□□□ -1.73
FOXD4Q12950 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC4.22□□□□□ -1.73
FOXD4Q12950 AL590233.1-201ENST00000430017 456 ntBASIC4.22□□□□□ -1.73
FOXD4Q12950 AL354941.1-201ENST00000438600 464 ntBASIC4.22□□□□□ -1.73
FOXD4Q12950 AL591503.2-201ENST00000442314 1005 ntBASIC4.22□□□□□ -1.73
FOXD4Q12950 MTND5P2-201ENST00000442927 1142 ntBASIC4.22□□□□□ -1.73
FOXD4Q12950 SETD6P1-201ENST00000444575 317 ntBASIC4.22□□□□□ -1.73
FOXD4Q12950 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC4.22□□□□□ -1.73
FOXD4Q12950 AL359073.1-201ENST00000448036 403 ntBASIC4.22□□□□□ -1.73
FOXD4Q12950 AL590664.1-201ENST00000448065 339 ntBASIC4.22□□□□□ -1.73
FOXD4Q12950 ARPC3P5-201ENST00000448802 534 ntBASIC4.22□□□□□ -1.73
FOXD4Q12950 HMGB3P22-202ENST00000451823 572 ntBASIC4.22□□□□□ -1.73
FOXD4Q12950 TRGVB-201ENST00000453257 471 ntBASIC4.22□□□□□ -1.73
FOXD4Q12950 AL109741.2-201ENST00000455561 343 ntBASIC4.22□□□□□ -1.73
FOXD4Q12950 AC092832.2-201ENST00000456621 389 ntTSL 2 BASIC4.22□□□□□ -1.73
FOXD4Q12950 MTND2P28-201ENST00000457540 1044 ntBASIC4.22□□□□□ -1.73
FOXD4Q12950 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC4.22□□□□□ -1.73
FOXD4Q12950 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC4.22□□□□□ -1.73
FOXD4Q12950 LINC01181-201ENST00000503718 556 ntTSL 4 BASIC4.22□□□□□ -1.73
FOXD4Q12950 AC010265.1-201ENST00000513509 211 ntBASIC4.22□□□□□ -1.73
FOXD4Q12950 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC4.22□□□□□ -1.73
FOXD4Q12950 OR5AK1P-201ENST00000524837 922 ntBASIC4.22□□□□□ -1.73
FOXD4Q12950 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC4.22□□□□□ -1.73
FOXD4Q12950 LINC02390-201ENST00000541404 560 ntTSL 4 BASIC4.22□□□□□ -1.73
FOXD4Q12950 REXO2-218ENST00000544827 880 ntTSL 3 BASIC4.22□□□□□ -1.73
FOXD4Q12950 AC106028.2-201ENST00000555325 464 ntTSL 4 BASIC4.22□□□□□ -1.73
FOXD4Q12950 AC008015.1-201ENST00000555505 465 ntBASIC4.22□□□□□ -1.73
FOXD4Q12950 RPL21P7-201ENST00000557463 483 ntBASIC4.22□□□□□ -1.73
FOXD4Q12950 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC4.22□□□□□ -1.73
FOXD4Q12950 AC009142.1-202ENST00000562565 563 ntTSL 2 BASIC4.22□□□□□ -1.73
FOXD4Q12950 LINC01633-201ENST00000566476 1091 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
FOXD4Q12950 AC090615.1-201ENST00000577519 154 ntBASIC4.22□□□□□ -1.73
FOXD4Q12950 AC002094.2-201ENST00000577850 1121 ntTSL 5 BASIC4.22□□□□□ -1.73
FOXD4Q12950 MAGOH2P-202ENST00000584384 429 ntBASIC4.22□□□□□ -1.73
FOXD4Q12950 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC4.22□□□□□ -1.73
FOXD4Q12950 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC4.22□□□□□ -1.73
FOXD4Q12950 DUXAP11-201ENST00000603858 526 ntBASIC4.22□□□□□ -1.73
FOXD4Q12950 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC4.22□□□□□ -1.73
FOXD4Q12950 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC4.22□□□□□ -1.73
FOXD4Q12950 AL596245.1-201ENST00000618994 362 ntBASIC4.22□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 92.8 ms