Protein–RNA interactions for Protein: Q12766

HMGXB3, HMG domain-containing protein 3, humanhuman

Predictions only

Length 1,538 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3Q12766 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
HMGXB3Q12766 RN7SKP32-201ENST00000410167 303 ntBASIC4.07□□□□□ -1.76
HMGXB3Q12766 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC4.07□□□□□ -1.76
HMGXB3Q12766 RN7SKP210-201ENST00000459176 261 ntBASIC4.07□□□□□ -1.76
HMGXB3Q12766 RPS27P29-201ENST00000463110 252 ntBASIC4.07□□□□□ -1.76
HMGXB3Q12766 AC147055.1-201ENST00000509261 750 ntBASIC4.07□□□□□ -1.76
HMGXB3Q12766 CR589904.2-201ENST00000612533 440 ntBASIC4.07□□□□□ -1.76
HMGXB3Q12766 AC004825.2-201ENST00000616634 455 ntBASIC4.07□□□□□ -1.76
HMGXB3Q12766 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
HMGXB3Q12766 GABPAP-201ENST00000419271 1356 ntBASIC4.07□□□□□ -1.76
HMGXB3Q12766 AL138828.1-203ENST00000419926 1570 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
HMGXB3Q12766 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
HMGXB3Q12766 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
HMGXB3Q12766 IQCM-206ENST00000636793 1900 ntAPPRIS P5 TSL 5 BASIC4.06□□□□□ -1.76
HMGXB3Q12766 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
HMGXB3Q12766 AL023284.1-201ENST00000403956 276 ntBASIC4.06□□□□□ -1.76
HMGXB3Q12766 ATG3P1-201ENST00000419507 911 ntBASIC4.06□□□□□ -1.76
HMGXB3Q12766 LINC01350-201ENST00000436955 642 ntTSL 3 BASIC4.06□□□□□ -1.76
HMGXB3Q12766 MTCYBP20-201ENST00000524239 1129 ntBASIC4.06□□□□□ -1.76
HMGXB3Q12766 AC007610.2-201ENST00000566770 666 ntTSL 3 BASIC4.06□□□□□ -1.76
HMGXB3Q12766 MIR6766-201ENST00000622641 72 ntBASIC4.06□□□□□ -1.76
HMGXB3Q12766 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC4.06□□□□□ -1.76
HMGXB3Q12766 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
HMGXB3Q12766 SNORA17.3-201ENST00000391159 129 ntBASIC4.05□□□□□ -1.76
HMGXB3Q12766 AL356806.1-201ENST00000422524 916 ntBASIC4.05□□□□□ -1.76
HMGXB3Q12766 AC093422.2-201ENST00000452599 686 ntTSL 2 BASIC4.05□□□□□ -1.76
HMGXB3Q12766 AC011037.1-201ENST00000483964 558 ntBASIC4.05□□□□□ -1.76
HMGXB3Q12766 AC021733.2-201ENST00000518830 497 ntBASIC4.05□□□□□ -1.76
HMGXB3Q12766 OR7K1P-201ENST00000546439 926 ntBASIC4.05□□□□□ -1.76
HMGXB3Q12766 LINC02448-201ENST00000548613 583 ntTSL 2 BASIC4.05□□□□□ -1.76
HMGXB3Q12766 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC4.05□□□□□ -1.76
HMGXB3Q12766 GMCL1P2-201ENST00000605230 823 ntBASIC4.05□□□□□ -1.76
HMGXB3Q12766 FAM114A2-210ENST00000520313 1394 ntTSL 2 BASIC4.05□□□□□ -1.76
HMGXB3Q12766 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC4.05□□□□□ -1.76
HMGXB3Q12766 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC4.05□□□□□ -1.76
HMGXB3Q12766 MTND5P29-201ENST00000458676 1807 ntBASIC4.05□□□□□ -1.76
HMGXB3Q12766 Y_RNA.164-201ENST00000363709 102 ntBASIC4.05□□□□□ -1.76
HMGXB3Q12766 RNU2-2P-201ENST00000410396 191 ntBASIC4.05□□□□□ -1.76
HMGXB3Q12766 AC092427.1-202ENST00000430569 476 ntBASIC4.05□□□□□ -1.76
HMGXB3Q12766 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC4.05□□□□□ -1.76
HMGXB3Q12766 AC092851.1-201ENST00000535964 478 ntBASIC4.05□□□□□ -1.76
HMGXB3Q12766 AC016590.3-201ENST00000611171 753 ntBASIC4.05□□□□□ -1.76
HMGXB3Q12766 U2.15-201ENST00000611544 191 ntBASIC4.05□□□□□ -1.76
HMGXB3Q12766 U2.16-201ENST00000613119 191 ntBASIC4.05□□□□□ -1.76
HMGXB3Q12766 U2.12-201ENST00000613778 191 ntBASIC4.05□□□□□ -1.76
HMGXB3Q12766 U2.20-201ENST00000613956 192 ntBASIC4.05□□□□□ -1.76
HMGXB3Q12766 U2.9-201ENST00000615427 191 ntBASIC4.05□□□□□ -1.76
HMGXB3Q12766 U2.11-201ENST00000616345 191 ntBASIC4.05□□□□□ -1.76
HMGXB3Q12766 U2.2-201ENST00000616535 191 ntBASIC4.05□□□□□ -1.76
HMGXB3Q12766 U2.3-201ENST00000617785 191 ntBASIC4.05□□□□□ -1.76
HMGXB3Q12766 U2.19-201ENST00000618602 191 ntBASIC4.05□□□□□ -1.76
HMGXB3Q12766 RNU2-1-201ENST00000618664 191 ntBASIC4.05□□□□□ -1.76
HMGXB3Q12766 U2.6-201ENST00000619225 191 ntBASIC4.05□□□□□ -1.76
HMGXB3Q12766 U2.5-201ENST00000619465 191 ntBASIC4.05□□□□□ -1.76
HMGXB3Q12766 U2.10-201ENST00000620268 191 ntBASIC4.05□□□□□ -1.76
HMGXB3Q12766 MIR219B-201ENST00000637023 88 ntBASIC4.05□□□□□ -1.76
HMGXB3Q12766 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
HMGXB3Q12766 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
HMGXB3Q12766 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC4.04□□□□□ -1.76
HMGXB3Q12766 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
HMGXB3Q12766 PROS2P-201ENST00000474651 1951 ntBASIC4.04□□□□□ -1.76
HMGXB3Q12766 Y_RNA.118-201ENST00000363300 101 ntBASIC4.04□□□□□ -1.76
HMGXB3Q12766 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC4.04□□□□□ -1.76
HMGXB3Q12766 FAT1P1-201ENST00000406588 507 ntBASIC4.04□□□□□ -1.76
HMGXB3Q12766 LINC01332-201ENST00000506612 502 ntTSL 4 BASIC4.04□□□□□ -1.76
HMGXB3Q12766 AC027701.1-202ENST00000520988 459 ntTSL 3 BASIC4.04□□□□□ -1.76
HMGXB3Q12766 AC079089.1-202ENST00000528800 1256 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
HMGXB3Q12766 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC4.04□□□□□ -1.76
HMGXB3Q12766 MIR4644-201ENST00000579929 84 ntBASIC4.04□□□□□ -1.76
HMGXB3Q12766 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC4.04□□□□□ -1.76
HMGXB3Q12766 AC110741.2-201ENST00000605278 268 ntBASIC4.04□□□□□ -1.76
HMGXB3Q12766 AC103710.1-201ENST00000610003 901 ntBASIC4.04□□□□□ -1.76
HMGXB3Q12766 MTND5P28-201ENST00000438005 1594 ntBASIC4.03□□□□□ -1.76
HMGXB3Q12766 FAM92A1P2-202ENST00000504766 877 ntBASIC4.03□□□□□ -1.76
HMGXB3Q12766 TP73-AS1.1-201ENST00000611447 161 ntBASIC4.03□□□□□ -1.76
HMGXB3Q12766 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC4.03□□□□□ -1.76
HMGXB3Q12766 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
HMGXB3Q12766 ARHGAP28-207ENST00000532996 1859 ntTSL 1 (best) BASIC4.03□□□□□ -1.77
HMGXB3Q12766 PTP4A1P7-201ENST00000423476 514 ntBASIC4.02□□□□□ -1.77
HMGXB3Q12766 AC090695.1-201ENST00000561269 1222 ntBASIC4.02□□□□□ -1.77
HMGXB3Q12766 UBE2Q2P2-203ENST00000613592 761 ntBASIC4.02□□□□□ -1.77
HMGXB3Q12766 AC092628.2-201ENST00000622492 339 ntBASIC4.02□□□□□ -1.77
HMGXB3Q12766 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC4.02□□□□□ -1.77
HMGXB3Q12766 AC103975.1-201ENST00000482506 483 ntBASIC4.01□□□□□ -1.77
HMGXB3Q12766 SUCLG2-AS1-203ENST00000496640 862 ntTSL 5 BASIC4.01□□□□□ -1.77
HMGXB3Q12766 AC020900.1-201ENST00000502568 565 ntTSL 4 BASIC4.01□□□□□ -1.77
HMGXB3Q12766 AC008696.2-201ENST00000503323 825 ntTSL 3 BASIC4.01□□□□□ -1.77
HMGXB3Q12766 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC4.01□□□□□ -1.77
HMGXB3Q12766 AP001207.1-201ENST00000524051 481 ntBASIC4.01□□□□□ -1.77
HMGXB3Q12766 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC4.01□□□□□ -1.77
HMGXB3Q12766 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC4.01□□□□□ -1.77
HMGXB3Q12766 AC022960.2-201ENST00000616300 666 ntBASIC4.01□□□□□ -1.77
HMGXB3Q12766 CGA-204ENST00000627148 1010 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
HMGXB3Q12766 AC009487.2-201ENST00000420969 6821 ntBASIC4.01□□□□□ -1.77
HMGXB3Q12766 NSRP1P1-201ENST00000444067 1693 ntBASIC4.01□□□□□ -1.77
HMGXB3Q12766 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
HMGXB3Q12766 ATP8A2P2-201ENST00000437678 1568 ntBASIC4.01□□□□□ -1.77
HMGXB3Q12766 AC008505.1-203ENST00000637345 1766 ntTSL 5 BASIC4.01□□□□□ -1.77
HMGXB3Q12766 Y_RNA.140-201ENST00000363474 103 ntBASIC4□□□□□ -1.77
HMGXB3Q12766 RPL23AP36-201ENST00000413895 458 ntBASIC4□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 92.6 ms