Protein–RNA interactions for Protein: P62987

UBA52, Ubiquitin-60S ribosomal protein L40, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52P62987 AL121594.5-201ENST00000631724 573 ntBASIC2.41□□□□□ -2.02
UBA52P62987 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC2.41□□□□□ -2.02
UBA52P62987 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
UBA52P62987 MIR512-1-201ENST00000384913 84 ntBASIC2.4□□□□□ -2.03
UBA52P62987 MIR153-1-201ENST00000384914 90 ntBASIC2.4□□□□□ -2.03
UBA52P62987 MTND4LP20-201ENST00000402379 270 ntBASIC2.4□□□□□ -2.03
UBA52P62987 U3.42-201ENST00000408746 214 ntBASIC2.4□□□□□ -2.03
UBA52P62987 AC004987.3-201ENST00000413879 771 ntBASIC2.4□□□□□ -2.03
UBA52P62987 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC2.4□□□□□ -2.03
UBA52P62987 RFESDP1-201ENST00000422350 461 ntBASIC2.4□□□□□ -2.03
UBA52P62987 PTP4A1P3-201ENST00000433661 420 ntBASIC2.4□□□□□ -2.03
UBA52P62987 AC024084.1-201ENST00000440744 455 ntTSL 5 BASIC2.4□□□□□ -2.03
UBA52P62987 RPL32P28-201ENST00000443577 397 ntBASIC2.4□□□□□ -2.03
UBA52P62987 AL590399.6-201ENST00000446396 307 ntBASIC2.4□□□□□ -2.03
UBA52P62987 AL360091.1-201ENST00000447949 496 ntTSL 5 BASIC2.4□□□□□ -2.03
UBA52P62987 AC117440.1-201ENST00000474107 571 ntBASIC2.4□□□□□ -2.03
UBA52P62987 AC093752.2-201ENST00000506942 573 ntTSL 5 BASIC2.4□□□□□ -2.03
UBA52P62987 AF279873.1-201ENST00000523393 313 ntBASIC2.4□□□□□ -2.03
UBA52P62987 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC2.4□□□□□ -2.03
UBA52P62987 AC011524.2-201ENST00000589198 399 ntTSL 3 BASIC2.4□□□□□ -2.03
UBA52P62987 AC112503.1-201ENST00000608436 391 ntBASIC2.4□□□□□ -2.03
UBA52P62987 BX664608.1-201ENST00000610519 487 ntBASIC2.4□□□□□ -2.03
UBA52P62987 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC2.4□□□□□ -2.03
UBA52P62987 AC107398.4-201ENST00000635489 765 ntTSL 2 BASIC2.4□□□□□ -2.03
UBA52P62987 Clostridiales-1.2-201ENST00000636724 160 ntBASIC2.4□□□□□ -2.03
UBA52P62987 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC2.4□□□□□ -2.03
UBA52P62987 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC2.4□□□□□ -2.03
UBA52P62987 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC2.4□□□□□ -2.03
UBA52P62987 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
UBA52P62987 AL645568.2-201ENST00000432815 1337 ntBASIC2.4□□□□□ -2.03
UBA52P62987 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC2.39□□□□□ -2.03
UBA52P62987 ANKRD62P1-201ENST00000434304 1623 ntBASIC2.39□□□□□ -2.03
UBA52P62987 AL355596.1-201ENST00000565399 3996 ntBASIC2.39□□□□□ -2.03
UBA52P62987 LINC01192-202ENST00000470546 1519 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
UBA52P62987 AC073325.2-201ENST00000339545 159 ntBASIC2.39□□□□□ -2.03
UBA52P62987 MIR6073-201ENST00000352083 89 ntBASIC2.39□□□□□ -2.03
UBA52P62987 RNU6-851P-201ENST00000384565 107 ntBASIC2.39□□□□□ -2.03
UBA52P62987 AL512633.1-201ENST00000399931 655 ntBASIC2.39□□□□□ -2.03
UBA52P62987 VN1R31P-201ENST00000417498 730 ntBASIC2.39□□□□□ -2.03
UBA52P62987 TRGV6-201ENST00000417928 299 ntBASIC2.39□□□□□ -2.03
UBA52P62987 AL645937.1-202ENST00000421799 937 ntBASIC2.39□□□□□ -2.03
UBA52P62987 AL513175.2-201ENST00000422071 443 ntBASIC2.39□□□□□ -2.03
UBA52P62987 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC2.39□□□□□ -2.03
UBA52P62987 AC005208.1-201ENST00000435112 599 ntTSL 3 BASIC2.39□□□□□ -2.03
UBA52P62987 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC2.39□□□□□ -2.03
UBA52P62987 NPM1P13-201ENST00000452663 865 ntBASIC2.39□□□□□ -2.03
UBA52P62987 GRM7-AS3-208ENST00000455623 947 ntTSL 3 BASIC2.39□□□□□ -2.03
UBA52P62987 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC2.39□□□□□ -2.03
UBA52P62987 RN7SKP244-201ENST00000516513 307 ntBASIC2.39□□□□□ -2.03
UBA52P62987 RN7SKP82-201ENST00000516786 223 ntBASIC2.39□□□□□ -2.03
UBA52P62987 SNORD59.2-201ENST00000516873 68 ntBASIC2.39□□□□□ -2.03
UBA52P62987 AC010306.1-201ENST00000523223 1117 ntBASIC2.39□□□□□ -2.03
UBA52P62987 AC138761.3-201ENST00000579993 334 ntBASIC2.39□□□□□ -2.03
UBA52P62987 VN1R90P-201ENST00000595717 726 ntBASIC2.39□□□□□ -2.03
UBA52P62987 RPL23AP92-201ENST00000603609 255 ntBASIC2.39□□□□□ -2.03
UBA52P62987 DUXAP3-201ENST00000603616 594 ntBASIC2.39□□□□□ -2.03
UBA52P62987 ATP1B3P1-201ENST00000605365 821 ntBASIC2.39□□□□□ -2.03
UBA52P62987 SNHG22-203ENST00000617833 660 ntBASIC2.39□□□□□ -2.03
UBA52P62987 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC2.39□□□□□ -2.03
UBA52P62987 ZNF271P-202ENST00000465539 1970 ntBASIC2.39□□□□□ -2.03
UBA52P62987 LINC02240-201ENST00000564199 1336 ntTSL 2 BASIC2.39□□□□□ -2.03
UBA52P62987 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.38□□□□□ -2.03
UBA52P62987 AC009501.3-201ENST00000605001 1352 ntBASIC2.38□□□□□ -2.03
UBA52P62987 MAPK10-322ENST00000641485 4530 ntBASIC2.38□□□□□ -2.03
UBA52P62987 AC023128.2-201ENST00000420880 1223 ntBASIC2.38□□□□□ -2.03
UBA52P62987 NUP35P1-201ENST00000422734 947 ntBASIC2.38□□□□□ -2.03
UBA52P62987 AL391832.1-201ENST00000423963 423 ntTSL 5 BASIC2.38□□□□□ -2.03
UBA52P62987 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC2.38□□□□□ -2.03
UBA52P62987 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.38□□□□□ -2.03
UBA52P62987 RPL23AP74-201ENST00000437246 471 ntBASIC2.38□□□□□ -2.03
UBA52P62987 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC2.38□□□□□ -2.03
UBA52P62987 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC2.38□□□□□ -2.03
UBA52P62987 RN7SL432P-201ENST00000484057 298 ntBASIC2.38□□□□□ -2.03
UBA52P62987 PRELID3BP6-201ENST00000503839 571 ntBASIC2.38□□□□□ -2.03
UBA52P62987 HIGD1AP13-201ENST00000509878 289 ntBASIC2.38□□□□□ -2.03
UBA52P62987 RN7SKP132-201ENST00000516001 208 ntBASIC2.38□□□□□ -2.03
UBA52P62987 FAM60DP-201ENST00000524174 632 ntBASIC2.38□□□□□ -2.03
UBA52P62987 RGS4-207ENST00000527809 817 ntTSL 4 BASIC2.38□□□□□ -2.03
UBA52P62987 AL133271.1-201ENST00000538229 291 ntBASIC2.38□□□□□ -2.03
UBA52P62987 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC2.38□□□□□ -2.03
UBA52P62987 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
UBA52P62987 HMGB1P6-201ENST00000569046 646 ntBASIC2.38□□□□□ -2.03
UBA52P62987 AC007014.1-201ENST00000572828 610 ntTSL 3 BASIC2.38□□□□□ -2.03
UBA52P62987 MIR3605-201ENST00000583214 100 ntBASIC2.38□□□□□ -2.03
UBA52P62987 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC2.38□□□□□ -2.03
UBA52P62987 NRBF2P5-201ENST00000603087 788 ntBASIC2.38□□□□□ -2.03
UBA52P62987 AL160237.3-201ENST00000604114 1013 ntBASIC2.38□□□□□ -2.03
UBA52P62987 GMCL1P2-201ENST00000605230 823 ntBASIC2.38□□□□□ -2.03
UBA52P62987 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC2.38□□□□□ -2.03
UBA52P62987 PLSCR2-206ENST00000610787 1001 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
UBA52P62987 AC007318.2-201ENST00000620999 243 ntBASIC2.38□□□□□ -2.03
UBA52P62987 IGHVIII-44-202ENST00000636235 289 ntBASIC2.38□□□□□ -2.03
UBA52P62987 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC2.38□□□□□ -2.03
UBA52P62987 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC2.37□□□□□ -2.03
UBA52P62987 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
UBA52P62987 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC2.37□□□□□ -2.03
UBA52P62987 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
UBA52P62987 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.37□□□□□ -2.03
UBA52P62987 AC062016.1-201ENST00000355719 319 ntBASIC2.37□□□□□ -2.03
UBA52P62987 RNU1-109P-201ENST00000383960 147 ntBASIC2.37□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 100.3 ms