Protein–RNA interactions for Protein: P61619

SEC61A1, Protein transport protein Sec61 subunit alpha isoform 1, humanhuman

Known RBP Predictions only

Length 476 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1P61619 AC027287.1-201ENST00000553115 1453 ntBASIC3.8□□□□□ -1.8
SEC61A1P61619 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
SEC61A1P61619 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC3.8□□□□□ -1.8
SEC61A1P61619 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
SEC61A1P61619 RNA5SP306-201ENST00000411087 107 ntBASIC3.8□□□□□ -1.8
SEC61A1P61619 SNORA74C-2-201ENST00000411179 201 ntBASIC3.8□□□□□ -1.8
SEC61A1P61619 ELOCP19-201ENST00000411919 318 ntBASIC3.8□□□□□ -1.8
SEC61A1P61619 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC3.8□□□□□ -1.8
SEC61A1P61619 MTND1P21-201ENST00000412991 285 ntBASIC3.8□□□□□ -1.8
SEC61A1P61619 RPS3AP9-201ENST00000417027 792 ntBASIC3.8□□□□□ -1.8
SEC61A1P61619 MAP1LC3BP1-201ENST00000417653 379 ntBASIC3.8□□□□□ -1.8
SEC61A1P61619 LINC00276-201ENST00000417751 596 ntTSL 2 BASIC3.8□□□□□ -1.8
SEC61A1P61619 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
SEC61A1P61619 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC3.8□□□□□ -1.8
SEC61A1P61619 RPS12P10-201ENST00000427031 377 ntBASIC3.8□□□□□ -1.8
SEC61A1P61619 AL596276.1-201ENST00000434465 418 ntBASIC3.8□□□□□ -1.8
SEC61A1P61619 AL121974.1-201ENST00000437859 377 ntTSL 3 BASIC3.8□□□□□ -1.8
SEC61A1P61619 AL353572.1-201ENST00000442490 417 ntBASIC3.8□□□□□ -1.8
SEC61A1P61619 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC3.8□□□□□ -1.8
SEC61A1P61619 AC244505.5-201ENST00000443639 207 ntBASIC3.8□□□□□ -1.8
SEC61A1P61619 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC3.8□□□□□ -1.8
SEC61A1P61619 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC3.8□□□□□ -1.8
SEC61A1P61619 AL162591.2-201ENST00000449634 317 ntBASIC3.8□□□□□ -1.8
SEC61A1P61619 AC093392.2-201ENST00000450682 337 ntBASIC3.8□□□□□ -1.8
SEC61A1P61619 HMGB3P22-202ENST00000451823 572 ntBASIC3.8□□□□□ -1.8
SEC61A1P61619 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC3.8□□□□□ -1.8
SEC61A1P61619 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC3.8□□□□□ -1.8
SEC61A1P61619 AC027673.1-201ENST00000456245 405 ntBASIC3.8□□□□□ -1.8
SEC61A1P61619 AC010301.1-201ENST00000473936 355 ntBASIC3.8□□□□□ -1.8
SEC61A1P61619 TMED11P-201ENST00000479478 690 ntBASIC3.8□□□□□ -1.8
SEC61A1P61619 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC3.8□□□□□ -1.8
SEC61A1P61619 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC3.8□□□□□ -1.8
SEC61A1P61619 SNORD116-26-201ENST00000516006 96 ntBASIC3.8□□□□□ -1.8
SEC61A1P61619 IGLVIV-65-201ENST00000517313 360 ntBASIC3.8□□□□□ -1.8
SEC61A1P61619 IGLVVI-25-1-201ENST00000521893 249 ntBASIC3.8□□□□□ -1.8
SEC61A1P61619 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC3.8□□□□□ -1.8
SEC61A1P61619 EEF1B2P4-201ENST00000551398 348 ntBASIC3.8□□□□□ -1.8
SEC61A1P61619 AC068446.3-201ENST00000555285 382 ntBASIC3.8□□□□□ -1.8
SEC61A1P61619 AC068831.4-201ENST00000556118 109 ntBASIC3.8□□□□□ -1.8
SEC61A1P61619 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC3.8□□□□□ -1.8
SEC61A1P61619 AL133457.1-201ENST00000564251 987 ntBASIC3.8□□□□□ -1.8
SEC61A1P61619 AC087481.2-201ENST00000565492 330 ntBASIC3.8□□□□□ -1.8
SEC61A1P61619 AL360157.1-201ENST00000565962 87 ntBASIC3.8□□□□□ -1.8
SEC61A1P61619 MIR5697-201ENST00000578045 78 ntBASIC3.8□□□□□ -1.8
SEC61A1P61619 MIR4512-201ENST00000583257 77 ntBASIC3.8□□□□□ -1.8
SEC61A1P61619 MAGOH2P-202ENST00000584384 429 ntBASIC3.8□□□□□ -1.8
SEC61A1P61619 ZNF540-204ENST00000586792 564 ntTSL 3 BASIC3.8□□□□□ -1.8
SEC61A1P61619 YWHAQP7-201ENST00000603536 658 ntBASIC3.8□□□□□ -1.8
SEC61A1P61619 PRELID3BP8-201ENST00000604148 295 ntBASIC3.8□□□□□ -1.8
SEC61A1P61619 HMGB1P50-201ENST00000605814 607 ntBASIC3.8□□□□□ -1.8
SEC61A1P61619 AC012603.1-201ENST00000606424 528 ntBASIC3.8□□□□□ -1.8
SEC61A1P61619 AF250324.2-201ENST00000608299 610 ntBASIC3.8□□□□□ -1.8
SEC61A1P61619 AC073534.2-201ENST00000620377 381 ntBASIC3.8□□□□□ -1.8
SEC61A1P61619 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
SEC61A1P61619 AC095031.1-201ENST00000623685 672 ntBASIC3.8□□□□□ -1.8
SEC61A1P61619 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC3.8□□□□□ -1.8
SEC61A1P61619 OR5H6-203ENST00000642105 978 ntBASIC3.8□□□□□ -1.8
SEC61A1P61619 MFSD8-242ENST00000641690 4199 ntBASIC3.8□□□□□ -1.8
SEC61A1P61619 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
SEC61A1P61619 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC3.8□□□□□ -1.8
SEC61A1P61619 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
SEC61A1P61619 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
SEC61A1P61619 AP002907.1-201ENST00000606361 1430 ntBASIC3.79□□□□□ -1.8
SEC61A1P61619 OR4G11P-202ENST00000642116 1414 ntBASIC3.79□□□□□ -1.8
SEC61A1P61619 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
SEC61A1P61619 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC3.79□□□□□ -1.8
SEC61A1P61619 OR56B2P-202ENST00000641377 2453 ntBASIC3.79□□□□□ -1.8
SEC61A1P61619 DDX18P3-201ENST00000404856 2007 ntBASIC3.79□□□□□ -1.8
SEC61A1P61619 RNA5SP307-201ENST00000362863 116 ntBASIC3.79□□□□□ -1.8
SEC61A1P61619 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
SEC61A1P61619 RNU1-63P-201ENST00000383902 164 ntBASIC3.79□□□□□ -1.8
SEC61A1P61619 RNU6-809P-201ENST00000384461 107 ntBASIC3.79□□□□□ -1.8
SEC61A1P61619 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC3.79□□□□□ -1.8
SEC61A1P61619 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC3.79□□□□□ -1.8
SEC61A1P61619 USP9YP13-201ENST00000417797 480 ntBASIC3.79□□□□□ -1.8
SEC61A1P61619 AIMP1P1-201ENST00000418670 937 ntBASIC3.79□□□□□ -1.8
SEC61A1P61619 Z97055.1-201ENST00000419730 712 ntBASIC3.79□□□□□ -1.8
SEC61A1P61619 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC3.79□□□□□ -1.8
SEC61A1P61619 NPM1P34-201ENST00000428821 893 ntBASIC3.79□□□□□ -1.8
SEC61A1P61619 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC3.79□□□□□ -1.8
SEC61A1P61619 RPL37P21-201ENST00000435890 276 ntBASIC3.79□□□□□ -1.8
SEC61A1P61619 LINC01754-201ENST00000437920 750 ntTSL 3 BASIC3.79□□□□□ -1.8
SEC61A1P61619 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC3.79□□□□□ -1.8
SEC61A1P61619 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
SEC61A1P61619 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
SEC61A1P61619 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC3.79□□□□□ -1.8
SEC61A1P61619 AC026979.1-201ENST00000492525 396 ntBASIC3.79□□□□□ -1.8
SEC61A1P61619 AC099509.1-201ENST00000502437 652 ntTSL 2 BASIC3.79□□□□□ -1.8
SEC61A1P61619 TMEM251P1-201ENST00000503717 318 ntBASIC3.79□□□□□ -1.8
SEC61A1P61619 AC114981.1-201ENST00000503897 678 ntBASIC3.79□□□□□ -1.8
SEC61A1P61619 AC113404.3-201ENST00000506621 555 ntTSL 5 BASIC3.79□□□□□ -1.8
SEC61A1P61619 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC3.79□□□□□ -1.8
SEC61A1P61619 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
SEC61A1P61619 RNU6-718P-201ENST00000516166 105 ntBASIC3.79□□□□□ -1.8
SEC61A1P61619 RNU4ATAC6P-201ENST00000516592 126 ntBASIC3.79□□□□□ -1.8
SEC61A1P61619 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC3.79□□□□□ -1.8
SEC61A1P61619 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC3.79□□□□□ -1.8
SEC61A1P61619 AC103739.1-201ENST00000558389 474 ntTSL 3 BASIC3.79□□□□□ -1.8
SEC61A1P61619 AC007495.1-203ENST00000569025 888 ntTSL 5 BASIC3.79□□□□□ -1.8
SEC61A1P61619 AC090844.2-203ENST00000582263 632 ntTSL 5 BASIC3.79□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 97.4 ms