Protein–RNA interactions for Protein: P61011

SRP54, Signal recognition particle 54 kDa protein, humanhuman

Known RBP Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54P61011 EQTN-202ENST00000380032 1033 ntAPPRIS P3 TSL 1 (best) BASIC3.57□□□□□ -1.84
SRP54P61011 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC3.57□□□□□ -1.84
SRP54P61011 RNU2-28P-201ENST00000410457 189 ntBASIC3.57□□□□□ -1.84
SRP54P61011 RNU2-71P-201ENST00000411395 189 ntBASIC3.57□□□□□ -1.84
SRP54P61011 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC3.57□□□□□ -1.84
SRP54P61011 RAD23BP2-201ENST00000416003 1207 ntBASIC3.57□□□□□ -1.84
SRP54P61011 HMGB3P20-201ENST00000417997 600 ntBASIC3.57□□□□□ -1.84
SRP54P61011 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
SRP54P61011 RPL21P66-201ENST00000426566 466 ntBASIC3.57□□□□□ -1.84
SRP54P61011 CYCSP4-201ENST00000429682 331 ntBASIC3.57□□□□□ -1.84
SRP54P61011 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC3.57□□□□□ -1.84
SRP54P61011 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC3.57□□□□□ -1.84
SRP54P61011 HMGB1P12-201ENST00000438594 598 ntBASIC3.57□□□□□ -1.84
SRP54P61011 CYCSP35-201ENST00000451978 304 ntBASIC3.57□□□□□ -1.84
SRP54P61011 AC099563.1-201ENST00000456086 418 ntBASIC3.57□□□□□ -1.84
SRP54P61011 FAIM-205ENST00000464668 641 ntAPPRIS P3 TSL 5 BASIC3.57□□□□□ -1.84
SRP54P61011 Z99496.1-201ENST00000469424 1477 ntBASIC3.57□□□□□ -1.84
SRP54P61011 AC010285.1-201ENST00000470580 392 ntBASIC3.57□□□□□ -1.84
SRP54P61011 RPS4XP13-201ENST00000483219 789 ntBASIC3.57□□□□□ -1.84
SRP54P61011 MTCO3P35-201ENST00000485582 781 ntBASIC3.57□□□□□ -1.84
SRP54P61011 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC3.57□□□□□ -1.84
SRP54P61011 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
SRP54P61011 SNORA31.20-201ENST00000517111 133 ntBASIC3.57□□□□□ -1.84
SRP54P61011 AC010376.1-201ENST00000522101 334 ntBASIC3.57□□□□□ -1.84
SRP54P61011 AP001189.2-201ENST00000527320 189 ntBASIC3.57□□□□□ -1.84
SRP54P61011 LRRC6P1-201ENST00000532188 885 ntBASIC3.57□□□□□ -1.84
SRP54P61011 AC025265.2-201ENST00000551905 478 ntTSL 3 BASIC3.57□□□□□ -1.84
SRP54P61011 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.57□□□□□ -1.84
SRP54P61011 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC3.57□□□□□ -1.84
SRP54P61011 AC091588.1-201ENST00000578504 359 ntTSL 3 BASIC3.57□□□□□ -1.84
SRP54P61011 AC025682.1-201ENST00000582389 437 ntTSL 5 BASIC3.57□□□□□ -1.84
SRP54P61011 AC006116.10-201ENST00000591836 581 ntBASIC3.57□□□□□ -1.84
SRP54P61011 AC010975.3-201ENST00000618727 978 ntBASIC3.57□□□□□ -1.84
SRP54P61011 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC3.57□□□□□ -1.84
SRP54P61011 AC069209.1-201ENST00000619282 651 ntBASIC3.57□□□□□ -1.84
SRP54P61011 AL049777.1-201ENST00000622740 518 ntBASIC3.57□□□□□ -1.84
SRP54P61011 AC091905.1-201ENST00000624400 311 ntBASIC3.57□□□□□ -1.84
SRP54P61011 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
SRP54P61011 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.57□□□□□ -1.84
SRP54P61011 AC091152.2-201ENST00000591628 2569 ntBASIC3.57□□□□□ -1.84
SRP54P61011 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
SRP54P61011 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
SRP54P61011 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
SRP54P61011 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
SRP54P61011 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC3.56□□□□□ -1.84
SRP54P61011 RNU6-1249P-201ENST00000363237 111 ntBASIC3.56□□□□□ -1.84
SRP54P61011 RNA5SP235-201ENST00000365411 114 ntBASIC3.56□□□□□ -1.84
SRP54P61011 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
SRP54P61011 SNORD65.1-201ENST00000390889 71 ntBASIC3.56□□□□□ -1.84
SRP54P61011 LUZP4P1-201ENST00000415420 344 ntBASIC3.56□□□□□ -1.84
SRP54P61011 MTCO3P12-201ENST00000416718 547 ntBASIC3.56□□□□□ -1.84
SRP54P61011 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC3.56□□□□□ -1.84
SRP54P61011 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC3.56□□□□□ -1.84
SRP54P61011 AC092641.1-201ENST00000440229 772 ntBASIC3.56□□□□□ -1.84
SRP54P61011 DNAJC19P1-201ENST00000455312 319 ntBASIC3.56□□□□□ -1.84
SRP54P61011 PNPLA4P1-201ENST00000458328 305 ntBASIC3.56□□□□□ -1.84
SRP54P61011 PLGLA-201ENST00000465668 449 ntBASIC3.56□□□□□ -1.84
SRP54P61011 AC069528.1-202ENST00000482888 637 ntBASIC3.56□□□□□ -1.84
SRP54P61011 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC3.56□□□□□ -1.84
SRP54P61011 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC3.56□□□□□ -1.84
SRP54P61011 TMPRSS11BNL-205ENST00000514295 1262 ntBASIC3.56□□□□□ -1.84
SRP54P61011 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC3.56□□□□□ -1.84
SRP54P61011 RN7SKP209-201ENST00000516888 304 ntBASIC3.56□□□□□ -1.84
SRP54P61011 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC3.56□□□□□ -1.84
SRP54P61011 LINC01932-201ENST00000520323 573 ntTSL 5 BASIC3.56□□□□□ -1.84
SRP54P61011 AC103843.2-201ENST00000530523 682 ntBASIC3.56□□□□□ -1.84
SRP54P61011 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC3.56□□□□□ -1.84
SRP54P61011 AC027544.2-201ENST00000539313 630 ntTSL 5 BASIC3.56□□□□□ -1.84
SRP54P61011 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC3.56□□□□□ -1.84
SRP54P61011 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC3.56□□□□□ -1.84
SRP54P61011 AC090502.2-201ENST00000549267 280 ntBASIC3.56□□□□□ -1.84
SRP54P61011 TRAV15-201ENST00000556680 249 ntBASIC3.56□□□□□ -1.84
SRP54P61011 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC3.56□□□□□ -1.84
SRP54P61011 RN7SL339P-201ENST00000580597 296 ntBASIC3.56□□□□□ -1.84
SRP54P61011 AC073387.2-201ENST00000604797 784 ntBASIC3.56□□□□□ -1.84
SRP54P61011 AC112220.2-201ENST00000605513 533 ntBASIC3.56□□□□□ -1.84
SRP54P61011 AC124312.4-201ENST00000605533 310 ntBASIC3.56□□□□□ -1.84
SRP54P61011 BRDTP1-201ENST00000605735 677 ntBASIC3.56□□□□□ -1.84
SRP54P61011 AC231759.1-201ENST00000616455 597 ntBASIC3.56□□□□□ -1.84
SRP54P61011 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC3.56□□□□□ -1.84
SRP54P61011 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC3.56□□□□□ -1.84
SRP54P61011 AC244517.1-201ENST00000606030 2086 ntBASIC3.56□□□□□ -1.84
SRP54P61011 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.56□□□□□ -1.84
SRP54P61011 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC3.56□□□□□ -1.84
SRP54P61011 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.56□□□□□ -1.84
SRP54P61011 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
SRP54P61011 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.55□□□□□ -1.84
SRP54P61011 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
SRP54P61011 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC3.55□□□□□ -1.84
SRP54P61011 OR8K5-201ENST00000313447 924 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
SRP54P61011 RNA5SP72-201ENST00000364442 117 ntBASIC3.55□□□□□ -1.84
SRP54P61011 ESD-201ENST00000378697 1079 ntTSL 5 BASIC3.55□□□□□ -1.84
SRP54P61011 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
SRP54P61011 MIR184-201ENST00000384962 84 ntBASIC3.55□□□□□ -1.84
SRP54P61011 MIR506-201ENST00000384998 124 ntBASIC3.55□□□□□ -1.84
SRP54P61011 MIR34B-201ENST00000385076 84 ntBASIC3.55□□□□□ -1.84
SRP54P61011 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
SRP54P61011 U3.29-201ENST00000391296 212 ntBASIC3.55□□□□□ -1.84
SRP54P61011 RPS7P15-201ENST00000415804 584 ntBASIC3.55□□□□□ -1.84
SRP54P61011 RPS15AP6-201ENST00000420703 385 ntBASIC3.55□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 92.3 ms