Protein–RNA interactions for Protein: P59025

RTP1, Receptor-transporting protein 1, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTP1P59025 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
RTP1P59025 RNU1-85P-201ENST00000364127 164 ntBASIC5.39□□□□□ -1.55
RTP1P59025 RNA5SP509-201ENST00000364577 119 ntBASIC5.39□□□□□ -1.55
RTP1P59025 Y_RNA.381-201ENST00000365666 102 ntBASIC5.39□□□□□ -1.55
RTP1P59025 RNU1-39P-201ENST00000383897 165 ntBASIC5.39□□□□□ -1.55
RTP1P59025 RNA5SP397-201ENST00000391323 118 ntBASIC5.39□□□□□ -1.55
RTP1P59025 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC5.39□□□□□ -1.55
RTP1P59025 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC5.39□□□□□ -1.55
RTP1P59025 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC5.39□□□□□ -1.55
RTP1P59025 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC5.39□□□□□ -1.55
RTP1P59025 SEPT14P3-201ENST00000439401 183 ntBASIC5.39□□□□□ -1.55
RTP1P59025 ACTR3P2-201ENST00000439585 1257 ntBASIC5.39□□□□□ -1.55
RTP1P59025 AL732372.2-207ENST00000445840 183 ntBASIC5.39□□□□□ -1.55
RTP1P59025 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC5.39□□□□□ -1.55
RTP1P59025 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC5.39□□□□□ -1.55
RTP1P59025 NIPA2P5-201ENST00000452282 464 ntBASIC5.39□□□□□ -1.55
RTP1P59025 SEPT14P2-201ENST00000453405 183 ntBASIC5.39□□□□□ -1.55
RTP1P59025 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC5.39□□□□□ -1.55
RTP1P59025 ALG13-211ENST00000473389 693 ntTSL 2 BASIC5.39□□□□□ -1.55
RTP1P59025 RPL7AP10-201ENST00000481016 791 ntBASIC5.39□□□□□ -1.55
RTP1P59025 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC5.39□□□□□ -1.55
RTP1P59025 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC5.39□□□□□ -1.55
RTP1P59025 SEPT14P4-201ENST00000513445 186 ntBASIC5.39□□□□□ -1.55
RTP1P59025 AC108471.1-201ENST00000513977 287 ntBASIC5.39□□□□□ -1.55
RTP1P59025 FO082796.1-201ENST00000523795 183 ntBASIC5.39□□□□□ -1.55
RTP1P59025 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC5.39□□□□□ -1.55
RTP1P59025 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC5.39□□□□□ -1.55
RTP1P59025 AC037471.2-201ENST00000564941 598 ntBASIC5.39□□□□□ -1.55
RTP1P59025 AC034105.3-201ENST00000565294 442 ntBASIC5.39□□□□□ -1.55
RTP1P59025 AC068408.2-201ENST00000584566 439 ntTSL 3 BASIC5.39□□□□□ -1.55
RTP1P59025 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC5.39□□□□□ -1.55
RTP1P59025 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
RTP1P59025 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC5.39□□□□□ -1.55
RTP1P59025 SLAIN1-204ENST00000358679 2075 ntAPPRIS P3 TSL 2 BASIC5.39□□□□□ -1.55
RTP1P59025 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
RTP1P59025 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC5.39□□□□□ -1.55
RTP1P59025 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC5.39□□□□□ -1.55
RTP1P59025 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC5.39□□□□□ -1.55
RTP1P59025 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC5.39□□□□□ -1.55
RTP1P59025 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC5.39□□□□□ -1.55
RTP1P59025 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC5.39□□□□□ -1.55
RTP1P59025 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC5.39□□□□□ -1.55
RTP1P59025 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC5.39□□□□□ -1.55
RTP1P59025 ENPP3-201ENST00000357639 3162 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
RTP1P59025 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC5.39□□□□□ -1.55
RTP1P59025 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC5.38□□□□□ -1.55
RTP1P59025 AC108467.2-201ENST00000617640 1597 ntBASIC5.38□□□□□ -1.55
RTP1P59025 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
RTP1P59025 ANKRD62P1-201ENST00000434304 1623 ntBASIC5.38□□□□□ -1.55
RTP1P59025 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC5.38□□□□□ -1.55
RTP1P59025 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
RTP1P59025 LPAR4-205ENST00000614823 2155 ntAPPRIS P1 TSL 4 BASIC5.38□□□□□ -1.55
RTP1P59025 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
RTP1P59025 ERCC6-202ENST00000374127 1782 ntBASIC5.38□□□□□ -1.55
RTP1P59025 Y_RNA.166-201ENST00000363730 102 ntBASIC5.38□□□□□ -1.55
RTP1P59025 SNORA51.2-201ENST00000364595 132 ntBASIC5.38□□□□□ -1.55
RTP1P59025 RNU6-952P-201ENST00000391164 108 ntBASIC5.38□□□□□ -1.55
RTP1P59025 HMGB1P17-201ENST00000403495 628 ntBASIC5.38□□□□□ -1.55
RTP1P59025 RPL7P25-201ENST00000404151 721 ntBASIC5.38□□□□□ -1.55
RTP1P59025 HYKK-202ENST00000408962 847 ntTSL 5 BASIC5.38□□□□□ -1.55
RTP1P59025 AC127391.1-201ENST00000411737 98 ntBASIC5.38□□□□□ -1.55
RTP1P59025 UQCRBP1-201ENST00000421129 336 ntBASIC5.38□□□□□ -1.55
RTP1P59025 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC5.38□□□□□ -1.55
RTP1P59025 MTND2P23-201ENST00000422990 651 ntBASIC5.38□□□□□ -1.55
RTP1P59025 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC5.38□□□□□ -1.55
RTP1P59025 OR51AB1P-201ENST00000429046 620 ntBASIC5.38□□□□□ -1.55
RTP1P59025 AC022022.1-201ENST00000430304 178 ntBASIC5.38□□□□□ -1.55
RTP1P59025 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC5.38□□□□□ -1.55
RTP1P59025 AC092162.1-201ENST00000432828 434 ntBASIC5.38□□□□□ -1.55
RTP1P59025 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
RTP1P59025 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC5.38□□□□□ -1.55
RTP1P59025 BTF3P6-201ENST00000448054 499 ntBASIC5.38□□□□□ -1.55
RTP1P59025 ARPC3P5-201ENST00000448802 534 ntBASIC5.38□□□□□ -1.55
RTP1P59025 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
RTP1P59025 CREM-238ENST00000488741 651 ntTSL 2 BASIC5.38□□□□□ -1.55
RTP1P59025 AC093278.1-201ENST00000494700 600 ntBASIC5.38□□□□□ -1.55
RTP1P59025 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
RTP1P59025 RNU6-202P-201ENST00000515998 96 ntBASIC5.38□□□□□ -1.55
RTP1P59025 TRAPPC2-208ENST00000519885 561 ntTSL 3 BASIC5.38□□□□□ -1.55
RTP1P59025 HYKK-203ENST00000563233 734 ntTSL 2 BASIC5.38□□□□□ -1.55
RTP1P59025 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC5.38□□□□□ -1.55
RTP1P59025 AC022726.1-201ENST00000587475 207 ntBASIC5.38□□□□□ -1.55
RTP1P59025 AL133173.2-201ENST00000614270 90 ntBASIC5.38□□□□□ -1.55
RTP1P59025 AC009237.17-201ENST00000618111 748 ntBASIC5.38□□□□□ -1.55
RTP1P59025 AC015871.5-202ENST00000623252 701 ntBASIC5.38□□□□□ -1.55
RTP1P59025 LYST-202ENST00000389794 12985 ntTSL 5 BASIC5.38□□□□□ -1.55
RTP1P59025 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
RTP1P59025 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC5.38□□□□□ -1.55
RTP1P59025 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
RTP1P59025 AL731566.1-201ENST00000620490 1937 ntBASIC5.38□□□□□ -1.55
RTP1P59025 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
RTP1P59025 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
RTP1P59025 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
RTP1P59025 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
RTP1P59025 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
RTP1P59025 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
RTP1P59025 PRLR-220ENST00000620785 11063 ntTSL 5 BASIC5.38□□□□□ -1.55
RTP1P59025 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
RTP1P59025 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
RTP1P59025 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC5.37□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 141.3 ms