Protein–RNA interactions for Protein: P48431

SOX2, Transcription factor SOX-2, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2P48431 ST6GAL2-IT1-201ENST00000446058 388 ntTSL 2 BASIC3.96□□□□□ -1.78
SOX2P48431 MTND4P18-201ENST00000447010 465 ntBASIC3.96□□□□□ -1.78
SOX2P48431 OR1H1P-201ENST00000448731 937 ntBASIC3.96□□□□□ -1.78
SOX2P48431 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC3.96□□□□□ -1.78
SOX2P48431 MTCO3P20-201ENST00000454926 688 ntBASIC3.96□□□□□ -1.78
SOX2P48431 RPL7AP28-201ENST00000464513 571 ntBASIC3.96□□□□□ -1.78
SOX2P48431 RPS4XP10-201ENST00000465034 731 ntBASIC3.96□□□□□ -1.78
SOX2P48431 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC3.96□□□□□ -1.78
SOX2P48431 MTAPP1-201ENST00000489154 819 ntBASIC3.96□□□□□ -1.78
SOX2P48431 RPL36AP41-201ENST00000493820 306 ntBASIC3.96□□□□□ -1.78
SOX2P48431 OR5H5P-201ENST00000503164 928 ntBASIC3.96□□□□□ -1.78
SOX2P48431 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC3.96□□□□□ -1.78
SOX2P48431 PPBPP1-201ENST00000510807 373 ntBASIC3.96□□□□□ -1.78
SOX2P48431 LINC00616-203ENST00000512536 568 ntTSL 4 BASIC3.96□□□□□ -1.78
SOX2P48431 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC3.96□□□□□ -1.78
SOX2P48431 AC010493.1-201ENST00000513479 292 ntBASIC3.96□□□□□ -1.78
SOX2P48431 RNU6-718P-201ENST00000516166 105 ntBASIC3.96□□□□□ -1.78
SOX2P48431 AP003059.1-201ENST00000526206 432 ntTSL 5 BASIC3.96□□□□□ -1.78
SOX2P48431 AP003181.2-201ENST00000528941 181 ntBASIC3.96□□□□□ -1.78
SOX2P48431 AP001880.2-201ENST00000538233 448 ntBASIC3.96□□□□□ -1.78
SOX2P48431 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC3.96□□□□□ -1.78
SOX2P48431 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC3.96□□□□□ -1.78
SOX2P48431 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC3.96□□□□□ -1.78
SOX2P48431 AC007225.2-201ENST00000562529 256 ntBASIC3.96□□□□□ -1.78
SOX2P48431 AC009101.1-201ENST00000568135 242 ntBASIC3.96□□□□□ -1.78
SOX2P48431 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC3.96□□□□□ -1.78
SOX2P48431 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC3.96□□□□□ -1.78
SOX2P48431 AC245014.2-201ENST00000603689 287 ntBASIC3.96□□□□□ -1.78
SOX2P48431 AC087283.1-201ENST00000604029 1074 ntBASIC3.96□□□□□ -1.78
SOX2P48431 AC246785.4-201ENST00000605374 287 ntBASIC3.96□□□□□ -1.78
SOX2P48431 AC121334.2-201ENST00000605387 271 ntBASIC3.96□□□□□ -1.78
SOX2P48431 AC007390.2-201ENST00000606229 3803 ntBASIC3.96□□□□□ -1.78
SOX2P48431 AC022467.1-201ENST00000614738 749 ntBASIC3.96□□□□□ -1.78
SOX2P48431 AL157786.1-207ENST00000627771 695 ntBASIC3.96□□□□□ -1.78
SOX2P48431 UOX-205ENST00000640983 544 ntTSL 4 BASIC3.96□□□□□ -1.78
SOX2P48431 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC3.96□□□□□ -1.78
SOX2P48431 AC027290.2-201ENST00000623210 18662 ntBASIC3.96□□□□□ -1.78
SOX2P48431 AC108467.2-201ENST00000617640 1597 ntBASIC3.96□□□□□ -1.78
SOX2P48431 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC3.96□□□□□ -1.78
SOX2P48431 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
SOX2P48431 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
SOX2P48431 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC3.96□□□□□ -1.78
SOX2P48431 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC3.96□□□□□ -1.78
SOX2P48431 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC3.95□□□□□ -1.78
SOX2P48431 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC3.95□□□□□ -1.78
SOX2P48431 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
SOX2P48431 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC3.95□□□□□ -1.78
SOX2P48431 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC3.95□□□□□ -1.78
SOX2P48431 AC008033.1-201ENST00000216407 1162 ntBASIC3.95□□□□□ -1.78
SOX2P48431 RNU1-108P-201ENST00000362556 161 ntBASIC3.95□□□□□ -1.78
SOX2P48431 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC3.95□□□□□ -1.78
SOX2P48431 Y_RNA.554-201ENST00000384672 102 ntBASIC3.95□□□□□ -1.78
SOX2P48431 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
SOX2P48431 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC3.95□□□□□ -1.78
SOX2P48431 AC022028.1-201ENST00000412054 408 ntBASIC3.95□□□□□ -1.78
SOX2P48431 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC3.95□□□□□ -1.78
SOX2P48431 RSU1P3-201ENST00000412878 835 ntBASIC3.95□□□□□ -1.78
SOX2P48431 EIF4EP1-201ENST00000422311 642 ntBASIC3.95□□□□□ -1.78
SOX2P48431 AL359853.3-201ENST00000423879 544 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
SOX2P48431 RBMY2QP-201ENST00000429799 1147 ntBASIC3.95□□□□□ -1.78
SOX2P48431 AL596276.1-201ENST00000434465 418 ntBASIC3.95□□□□□ -1.78
SOX2P48431 MTND4LP10-201ENST00000435146 291 ntBASIC3.95□□□□□ -1.78
SOX2P48431 AC108734.1-201ENST00000439549 399 ntBASIC3.95□□□□□ -1.78
SOX2P48431 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC3.95□□□□□ -1.78
SOX2P48431 AC003071.1-201ENST00000451219 789 ntBASIC3.95□□□□□ -1.78
SOX2P48431 FGF7P6-202ENST00000451282 293 ntBASIC3.95□□□□□ -1.78
SOX2P48431 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC3.95□□□□□ -1.78
SOX2P48431 RPS20P24-201ENST00000457473 361 ntBASIC3.95□□□□□ -1.78
SOX2P48431 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC3.95□□□□□ -1.78
SOX2P48431 RPL37P6-202ENST00000464216 403 ntBASIC3.95□□□□□ -1.78
SOX2P48431 AC005532.2-201ENST00000467154 373 ntBASIC3.95□□□□□ -1.78
SOX2P48431 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC3.95□□□□□ -1.78
SOX2P48431 RPL23AP72-201ENST00000492447 435 ntBASIC3.95□□□□□ -1.78
SOX2P48431 AC008897.1-201ENST00000494006 347 ntBASIC3.95□□□□□ -1.78
SOX2P48431 SCARNA22-201ENST00000503991 125 ntBASIC3.95□□□□□ -1.78
SOX2P48431 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC3.95□□□□□ -1.78
SOX2P48431 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC3.95□□□□□ -1.78
SOX2P48431 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC3.95□□□□□ -1.78
SOX2P48431 MTCO3P44-201ENST00000510977 541 ntBASIC3.95□□□□□ -1.78
SOX2P48431 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC3.95□□□□□ -1.78
SOX2P48431 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC3.95□□□□□ -1.78
SOX2P48431 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC3.95□□□□□ -1.78
SOX2P48431 RRM2B-206ENST00000519317 420 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
SOX2P48431 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC3.95□□□□□ -1.78
SOX2P48431 AL354920.1-202ENST00000531661 1017 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
SOX2P48431 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC3.95□□□□□ -1.78
SOX2P48431 AC084200.1-201ENST00000547370 547 ntTSL 4 BASIC3.95□□□□□ -1.78
SOX2P48431 HAUS8P1-201ENST00000549005 542 ntBASIC3.95□□□□□ -1.78
SOX2P48431 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC3.95□□□□□ -1.78
SOX2P48431 AP005121.1-201ENST00000578243 469 ntTSL 3 BASIC3.95□□□□□ -1.78
SOX2P48431 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC3.95□□□□□ -1.78
SOX2P48431 LINC01791-201ENST00000589511 677 ntTSL 5 BASIC3.95□□□□□ -1.78
SOX2P48431 RPL27-207ENST00000590864 569 ntTSL 2 BASIC3.95□□□□□ -1.78
SOX2P48431 AC011487.3-201ENST00000593607 453 ntBASIC3.95□□□□□ -1.78
SOX2P48431 AL160290.3-201ENST00000604869 165 ntBASIC3.95□□□□□ -1.78
SOX2P48431 AC010201.1-201ENST00000605051 540 ntBASIC3.95□□□□□ -1.78
SOX2P48431 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC3.95□□□□□ -1.78
SOX2P48431 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC3.95□□□□□ -1.78
SOX2P48431 OR10A6-202ENST00000623991 945 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
SOX2P48431 MIR6863-201ENST00000636112 90 ntBASIC3.95□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 119.9 ms