Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 AC244258.1-201ENST00000637553 1071 ntBASIC3.49□□□□□ -1.85
SSR1P43307 AP003122.5-201ENST00000527668 3766 ntBASIC3.49□□□□□ -1.85
SSR1P43307 ZNF807-201ENST00000328088 1707 ntBASIC3.49□□□□□ -1.85
SSR1P43307 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
SSR1P43307 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.48□□□□□ -1.85
SSR1P43307 STATH-201ENST00000246895 598 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
SSR1P43307 MIR16-2-201ENST00000362117 81 ntBASIC3.48□□□□□ -1.85
SSR1P43307 RNA5SP50-201ENST00000363731 107 ntBASIC3.48□□□□□ -1.85
SSR1P43307 SNORD56.4-201ENST00000363883 71 ntBASIC3.48□□□□□ -1.85
SSR1P43307 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC3.48□□□□□ -1.85
SSR1P43307 C1orf146-201ENST00000370373 871 ntTSL 5 BASIC3.48□□□□□ -1.85
SSR1P43307 HSFY4P-201ENST00000415994 1181 ntBASIC3.48□□□□□ -1.85
SSR1P43307 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC3.48□□□□□ -1.85
SSR1P43307 LINC00400-201ENST00000425609 547 ntTSL 3 BASIC3.48□□□□□ -1.85
SSR1P43307 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC3.48□□□□□ -1.85
SSR1P43307 UBE2V1P1-201ENST00000430836 445 ntBASIC3.48□□□□□ -1.85
SSR1P43307 HMGN2P31-201ENST00000432430 273 ntBASIC3.48□□□□□ -1.85
SSR1P43307 KCTD10P1-201ENST00000434203 625 ntBASIC3.48□□□□□ -1.85
SSR1P43307 AC092641.1-201ENST00000440229 772 ntBASIC3.48□□□□□ -1.85
SSR1P43307 AL929288.2-201ENST00000446368 407 ntBASIC3.48□□□□□ -1.85
SSR1P43307 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC3.48□□□□□ -1.85
SSR1P43307 AC020900.1-201ENST00000502568 565 ntTSL 4 BASIC3.48□□□□□ -1.85
SSR1P43307 GYPA-204ENST00000504786 357 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
SSR1P43307 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC3.48□□□□□ -1.85
SSR1P43307 MTCYBP37-201ENST00000510642 1133 ntBASIC3.48□□□□□ -1.85
SSR1P43307 RGS4-207ENST00000527809 817 ntTSL 4 BASIC3.48□□□□□ -1.85
SSR1P43307 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC3.48□□□□□ -1.85
SSR1P43307 AC138907.2-201ENST00000561479 866 ntTSL 3 BASIC3.48□□□□□ -1.85
SSR1P43307 AC145350.4-201ENST00000562827 866 ntTSL 3 BASIC3.48□□□□□ -1.85
SSR1P43307 AC133485.5-201ENST00000563407 866 ntTSL 3 BASIC3.48□□□□□ -1.85
SSR1P43307 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC3.48□□□□□ -1.85
SSR1P43307 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC3.48□□□□□ -1.85
SSR1P43307 AC017100.2-201ENST00000584628 355 ntBASIC3.48□□□□□ -1.85
SSR1P43307 AC009220.3-201ENST00000604318 586 ntBASIC3.48□□□□□ -1.85
SSR1P43307 AL009028.1-201ENST00000604895 802 ntBASIC3.48□□□□□ -1.85
SSR1P43307 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC3.48□□□□□ -1.85
SSR1P43307 U3.45-201ENST00000607547 219 ntBASIC3.48□□□□□ -1.85
SSR1P43307 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC3.48□□□□□ -1.85
SSR1P43307 VN1R9P-201ENST00000614184 867 ntBASIC3.48□□□□□ -1.85
SSR1P43307 AC107308.1-201ENST00000615897 301 ntBASIC3.48□□□□□ -1.85
SSR1P43307 AC002076.2-201ENST00000617362 122 ntBASIC3.48□□□□□ -1.85
SSR1P43307 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC3.48□□□□□ -1.85
SSR1P43307 AC039056.2-201ENST00000622261 511 ntBASIC3.48□□□□□ -1.85
SSR1P43307 AC020923.1-201ENST00000624021 917 ntBASIC3.48□□□□□ -1.85
SSR1P43307 AC132825.7-201ENST00000638744 335 ntBASIC3.48□□□□□ -1.85
SSR1P43307 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
SSR1P43307 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
SSR1P43307 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
SSR1P43307 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC3.48□□□□□ -1.85
SSR1P43307 PSG6-202ENST00000292125 1391 ntAPPRIS P3 TSL 1 (best) BASIC3.48□□□□□ -1.85
SSR1P43307 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC3.48□□□□□ -1.85
SSR1P43307 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
SSR1P43307 VTRNA1-1-201ENST00000363120 99 ntBASIC3.47□□□□□ -1.85
SSR1P43307 RNU6-799P-201ENST00000363567 107 ntBASIC3.47□□□□□ -1.85
SSR1P43307 MIR200C-201ENST00000384980 68 ntBASIC3.47□□□□□ -1.85
SSR1P43307 FO393413.1-201ENST00000402892 195 ntBASIC3.47□□□□□ -1.85
SSR1P43307 UBE2V1P11-201ENST00000411559 285 ntBASIC3.47□□□□□ -1.85
SSR1P43307 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC3.47□□□□□ -1.85
SSR1P43307 TRIM60P5Y-201ENST00000413946 574 ntBASIC3.47□□□□□ -1.85
SSR1P43307 AC246680.2-201ENST00000422106 389 ntBASIC3.47□□□□□ -1.85
SSR1P43307 DPYD-AS2-201ENST00000422259 788 ntTSL 3 BASIC3.47□□□□□ -1.85
SSR1P43307 FAM204CP-201ENST00000424489 642 ntBASIC3.47□□□□□ -1.85
SSR1P43307 AC091286.1-201ENST00000431233 461 ntBASIC3.47□□□□□ -1.85
SSR1P43307 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC3.47□□□□□ -1.85
SSR1P43307 RABEPKP1-201ENST00000440529 1026 ntBASIC3.47□□□□□ -1.85
SSR1P43307 RPL39P40-201ENST00000445481 146 ntBASIC3.47□□□□□ -1.85
SSR1P43307 GXYLT1P1-201ENST00000446657 490 ntBASIC3.47□□□□□ -1.85
SSR1P43307 AC012355.1-201ENST00000450290 769 ntTSL 3 BASIC3.47□□□□□ -1.85
SSR1P43307 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC3.47□□□□□ -1.85
SSR1P43307 PRDX3P4-201ENST00000470828 747 ntBASIC3.47□□□□□ -1.85
SSR1P43307 RN7SL601P-201ENST00000471221 293 ntBASIC3.47□□□□□ -1.85
SSR1P43307 OR5H3P-201ENST00000502817 919 ntBASIC3.47□□□□□ -1.85
SSR1P43307 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
SSR1P43307 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC3.47□□□□□ -1.85
SSR1P43307 AC026403.1-201ENST00000518938 295 ntBASIC3.47□□□□□ -1.85
SSR1P43307 IGLVIV-66-1-201ENST00000521832 460 ntBASIC3.47□□□□□ -1.85
SSR1P43307 AC103952.1-201ENST00000521872 590 ntTSL 3 BASIC3.47□□□□□ -1.85
SSR1P43307 IGJP1-201ENST00000522682 475 ntBASIC3.47□□□□□ -1.85
SSR1P43307 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC3.47□□□□□ -1.85
SSR1P43307 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC3.47□□□□□ -1.85
SSR1P43307 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC3.47□□□□□ -1.85
SSR1P43307 AC007333.2-201ENST00000569998 559 ntTSL 4 BASIC3.47□□□□□ -1.85
SSR1P43307 MIR5186-201ENST00000577504 120 ntBASIC3.47□□□□□ -1.85
SSR1P43307 MIR4276-201ENST00000584832 70 ntBASIC3.47□□□□□ -1.85
SSR1P43307 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC3.47□□□□□ -1.85
SSR1P43307 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC3.47□□□□□ -1.85
SSR1P43307 AL671309.1-201ENST00000603750 544 ntBASIC3.47□□□□□ -1.85
SSR1P43307 RBM12B-AS1-201ENST00000623283 653 ntBASIC3.47□□□□□ -1.85
SSR1P43307 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC3.47□□□□□ -1.85
SSR1P43307 CRNDE-213ENST00000635991 546 ntTSL 5 BASIC3.47□□□□□ -1.85
SSR1P43307 AC012442.3-202ENST00000636742 206 ntBASIC3.47□□□□□ -1.85
SSR1P43307 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
SSR1P43307 MAPK10-266ENST00000641066 6555 ntBASIC3.47□□□□□ -1.85
SSR1P43307 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
SSR1P43307 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC3.46□□□□□ -1.85
SSR1P43307 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
SSR1P43307 KLRC4-201ENST00000309384 930 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
SSR1P43307 NFIB-202ENST00000380924 840 ntTSL 5 BASIC3.46□□□□□ -1.86
SSR1P43307 RNU6-1226P-201ENST00000384317 107 ntBASIC3.46□□□□□ -1.86
SSR1P43307 Y_RNA.493-201ENST00000384422 102 ntBASIC3.46□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 100.9 ms