Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 LUZP4P1-201ENST00000415420 344 ntBASIC2.52□□□□□ -2.01
HTTP42858 P4HA2-AS1-201ENST00000417667 839 ntTSL 3 BASIC2.52□□□□□ -2.01
HTTP42858 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC2.52□□□□□ -2.01
HTTP42858 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC2.52□□□□□ -2.01
HTTP42858 AC103975.1-201ENST00000482506 483 ntBASIC2.52□□□□□ -2.01
HTTP42858 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC2.52□□□□□ -2.01
HTTP42858 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
HTTP42858 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
HTTP42858 MIR423-201ENST00000362201 94 ntBASIC2.51□□□□□ -2.01
HTTP42858 RN7SKP44-201ENST00000363602 316 ntBASIC2.51□□□□□ -2.01
HTTP42858 RNU6-457P-201ENST00000363999 107 ntBASIC2.51□□□□□ -2.01
HTTP42858 AC092427.1-202ENST00000430569 476 ntBASIC2.51□□□□□ -2.01
HTTP42858 AL606490.7-201ENST00000433136 191 ntBASIC2.51□□□□□ -2.01
HTTP42858 RPS29P11-201ENST00000496507 171 ntBASIC2.51□□□□□ -2.01
HTTP42858 AC104090.1-201ENST00000506341 1171 ntBASIC2.51□□□□□ -2.01
HTTP42858 MIR449C-201ENST00000516047 92 ntBASIC2.51□□□□□ -2.01
HTTP42858 AC015911.5-201ENST00000587076 451 ntBASIC2.51□□□□□ -2.01
HTTP42858 ATP13A5-205ENST00000620313 709 ntTSL 5 BASIC2.51□□□□□ -2.01
HTTP42858 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC2.51□□□□□ -2.01
HTTP42858 ARHGAP28-207ENST00000532996 1859 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
HTTP42858 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.51□□□□□ -2.01
HTTP42858 SCARNA16.3-201ENST00000516595 184 ntBASIC2.51□□□□□ -2.01
HTTP42858 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC2.51□□□□□ -2.01
HTTP42858 Z99129.2-201ENST00000619967 314 ntBASIC2.51□□□□□ -2.01
HTTP42858 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC2.51□□□□□ -2.01
HTTP42858 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC2.51□□□□□ -2.01
HTTP42858 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC2.51□□□□□ -2.01
HTTP42858 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
HTTP42858 SNORA41-201ENST00000384675 132 ntBASIC2.51□□□□□ -2.01
HTTP42858 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
HTTP42858 AL451074.3-201ENST00000437709 472 ntBASIC2.51□□□□□ -2.01
HTTP42858 RN7SKP96-201ENST00000516948 297 ntBASIC2.51□□□□□ -2.01
HTTP42858 THUMPD3P1-201ENST00000506556 1480 ntBASIC2.5□□□□□ -2.01
HTTP42858 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC2.5□□□□□ -2.01
HTTP42858 OR5AC2-201ENST00000358642 930 ntAPPRIS P1 BASIC2.5□□□□□ -2.01
HTTP42858 RNA5SP210-201ENST00000391034 120 ntBASIC2.5□□□□□ -2.01
HTTP42858 AC098826.1-201ENST00000433943 471 ntBASIC2.5□□□□□ -2.01
HTTP42858 RPL7P54-201ENST00000438336 674 ntBASIC2.5□□□□□ -2.01
HTTP42858 C5orf63-207ENST00000606937 607 ntTSL 2 BASIC2.5□□□□□ -2.01
HTTP42858 AC107398.4-201ENST00000635489 765 ntTSL 2 BASIC2.5□□□□□ -2.01
HTTP42858 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC2.5□□□□□ -2.01
HTTP42858 RNA5SP325-201ENST00000363756 130 ntBASIC2.5□□□□□ -2.01
HTTP42858 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC2.5□□□□□ -2.01
HTTP42858 MIR5092-201ENST00000583139 88 ntBASIC2.5□□□□□ -2.01
HTTP42858 AP004372.1-201ENST00000604842 844 ntBASIC2.5□□□□□ -2.01
HTTP42858 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
HTTP42858 ADAM3A-203ENST00000461344 2157 ntBASIC2.49□□□□□ -2.01
HTTP42858 AC008505.1-203ENST00000637345 1766 ntTSL 5 BASIC2.49□□□□□ -2.01
HTTP42858 RNU1-91P-201ENST00000364746 163 ntBASIC2.49□□□□□ -2.01
HTTP42858 KLRC2-202ENST00000381902 1221 ntAPPRIS P2 TSL 1 (best) BASIC2.49□□□□□ -2.01
HTTP42858 AP1B1P2-201ENST00000416196 106 ntBASIC2.49□□□□□ -2.01
HTTP42858 LANCL1-AS1-201ENST00000416344 714 ntTSL 3 BASIC2.49□□□□□ -2.01
HTTP42858 AL606534.3-201ENST00000437499 373 ntTSL 5 BASIC2.49□□□□□ -2.01
HTTP42858 RN7SKP60-201ENST00000516985 239 ntBASIC2.49□□□□□ -2.01
HTTP42858 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC2.49□□□□□ -2.01
HTTP42858 AC012182.1-201ENST00000570133 895 ntBASIC2.49□□□□□ -2.01
HTTP42858 AC016542.2-201ENST00000624201 619 ntBASIC2.49□□□□□ -2.01
HTTP42858 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC2.49□□□□□ -2.01
HTTP42858 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC2.49□□□□□ -2.01
HTTP42858 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC2.49□□□□□ -2.01
HTTP42858 RNU6-582P-201ENST00000362989 107 ntBASIC2.49□□□□□ -2.01
HTTP42858 AL590084.1-201ENST00000407885 387 ntBASIC2.49□□□□□ -2.01
HTTP42858 RHEBP3-201ENST00000411920 351 ntBASIC2.49□□□□□ -2.01
HTTP42858 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC2.49□□□□□ -2.01
HTTP42858 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC2.49□□□□□ -2.01
HTTP42858 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC2.49□□□□□ -2.01
HTTP42858 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC2.49□□□□□ -2.01
HTTP42858 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
HTTP42858 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC2.49□□□□□ -2.01
HTTP42858 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC2.49□□□□□ -2.01
HTTP42858 Z98941.1-201ENST00000407764 100 ntBASIC2.48□□□□□ -2.01
HTTP42858 MTCO3P21-201ENST00000430791 643 ntBASIC2.48□□□□□ -2.01
HTTP42858 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.48□□□□□ -2.01
HTTP42858 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC2.48□□□□□ -2.01
HTTP42858 OR7K1P-201ENST00000546439 926 ntBASIC2.48□□□□□ -2.01
HTTP42858 RPS3AP4-201ENST00000555161 764 ntBASIC2.48□□□□□ -2.01
HTTP42858 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC2.48□□□□□ -2.01
HTTP42858 AC072062.1-205ENST00000595058 962 ntTSL 3 BASIC2.48□□□□□ -2.01
HTTP42858 VN1R80P-201ENST00000597126 338 ntBASIC2.48□□□□□ -2.01
HTTP42858 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC2.48□□□□□ -2.01
HTTP42858 CD226-201ENST00000280200 12319 ntAPPRIS P2 TSL 1 (best) BASIC2.48□□□□□ -2.01
HTTP42858 UGT2A2-201ENST00000604021 1544 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
HTTP42858 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.48□□□□□ -2.01
HTTP42858 NDUFB4P6-201ENST00000436819 366 ntBASIC2.48□□□□□ -2.01
HTTP42858 CEACAMP4-201ENST00000457676 421 ntBASIC2.48□□□□□ -2.01
HTTP42858 AC025881.1-201ENST00000518851 512 ntBASIC2.48□□□□□ -2.01
HTTP42858 MTRNR2L11-201ENST00000604646 1552 ntAPPRIS P1 BASIC2.48□□□□□ -2.01
HTTP42858 MIR1276-201ENST00000408707 83 ntBASIC2.48□□□□□ -2.01
HTTP42858 POLR2J4-204ENST00000418424 324 ntBASIC2.48□□□□□ -2.01
HTTP42858 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC2.48□□□□□ -2.01
HTTP42858 CCNHP1-201ENST00000513311 678 ntBASIC2.48□□□□□ -2.01
HTTP42858 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.48□□□□□ -2.01
HTTP42858 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC2.48□□□□□ -2.01
HTTP42858 AL356266.1-201ENST00000623311 483 ntBASIC2.48□□□□□ -2.01
HTTP42858 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC2.48□□□□□ -2.01
HTTP42858 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
HTTP42858 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC2.48□□□□□ -2.01
HTTP42858 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
HTTP42858 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.47□□□□□ -2.01
HTTP42858 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.47□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 109.1 ms