Protein–RNA interactions for Protein: P41002

CCNF, Cyclin-F, humanhuman

Predictions only

Length 786 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNFP41002 FOCAD-AS1-201ENST00000439876 359 ntTSL 2 BASIC5.26□□□□□ -1.57
CCNFP41002 RPL7AP61-201ENST00000443410 636 ntBASIC5.26□□□□□ -1.57
CCNFP41002 BTF3P6-201ENST00000448054 499 ntBASIC5.26□□□□□ -1.57
CCNFP41002 AC073415.1-201ENST00000449240 153 ntBASIC5.26□□□□□ -1.57
CCNFP41002 AC108059.3-201ENST00000456388 214 ntBASIC5.26□□□□□ -1.57
CCNFP41002 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC5.26□□□□□ -1.57
CCNFP41002 AC108161.1-201ENST00000461060 402 ntBASIC5.26□□□□□ -1.57
CCNFP41002 RPL5P22-201ENST00000480199 884 ntBASIC5.26□□□□□ -1.57
CCNFP41002 AL139099.1-201ENST00000497398 403 ntBASIC5.26□□□□□ -1.57
CCNFP41002 COX7A2P2-201ENST00000505291 250 ntBASIC5.26□□□□□ -1.57
CCNFP41002 FTH1P21-201ENST00000512179 511 ntBASIC5.26□□□□□ -1.57
CCNFP41002 AC069272.1-201ENST00000514843 680 ntTSL 3 BASIC5.26□□□□□ -1.57
CCNFP41002 BX510359.5-201ENST00000515651 304 ntBASIC5.26□□□□□ -1.57
CCNFP41002 RNU6-798P-201ENST00000516912 103 ntBASIC5.26□□□□□ -1.57
CCNFP41002 RNU6-1314P-201ENST00000517139 104 ntBASIC5.26□□□□□ -1.57
CCNFP41002 AC040914.1-201ENST00000518674 318 ntTSL 3 BASIC5.26□□□□□ -1.57
CCNFP41002 AC011979.2-201ENST00000527568 352 ntBASIC5.26□□□□□ -1.57
CCNFP41002 AC087477.3-201ENST00000559214 552 ntTSL 4 BASIC5.26□□□□□ -1.57
CCNFP41002 COX6CP3-201ENST00000580869 223 ntBASIC5.26□□□□□ -1.57
CCNFP41002 AC008814.1-201ENST00000603797 406 ntBASIC5.26□□□□□ -1.57
CCNFP41002 AC090948.1-201ENST00000607464 549 ntBASIC5.26□□□□□ -1.57
CCNFP41002 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC5.26□□□□□ -1.57
CCNFP41002 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC5.26□□□□□ -1.57
CCNFP41002 ARHGAP5-206ENST00000539826 4881 ntAPPRIS P3 TSL 1 (best) BASIC5.26□□□□□ -1.57
CCNFP41002 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC5.26□□□□□ -1.57
CCNFP41002 ADGRL3-217ENST00000514591 6297 ntAPPRIS P2 TSL 5 BASIC5.26□□□□□ -1.57
CCNFP41002 LCMT1-AS2-202ENST00000565214 5666 ntBASIC5.26□□□□□ -1.57
CCNFP41002 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC5.26□□□□□ -1.57
CCNFP41002 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
CCNFP41002 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
CCNFP41002 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
CCNFP41002 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC5.25□□□□□ -1.57
CCNFP41002 ACKR4-201ENST00000249887 1914 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
CCNFP41002 ZFP14-201ENST00000270001 7489 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
CCNFP41002 OR5AN1-201ENST00000313940 1037 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
CCNFP41002 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC5.25□□□□□ -1.57
CCNFP41002 RNA5SP335-201ENST00000363817 110 ntBASIC5.25□□□□□ -1.57
CCNFP41002 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
CCNFP41002 RNU6-641P-201ENST00000384006 107 ntBASIC5.25□□□□□ -1.57
CCNFP41002 MIR19A-201ENST00000384878 82 ntBASIC5.25□□□□□ -1.57
CCNFP41002 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
CCNFP41002 AC009804.1-201ENST00000400949 179 ntBASIC5.25□□□□□ -1.57
CCNFP41002 HSPA8P15-201ENST00000401676 786 ntBASIC5.25□□□□□ -1.57
CCNFP41002 RNU6ATAC18P-201ENST00000408413 101 ntBASIC5.25□□□□□ -1.57
CCNFP41002 Y_RNA.615-201ENST00000410769 117 ntBASIC5.25□□□□□ -1.57
CCNFP41002 HMGN1P24-201ENST00000412282 298 ntBASIC5.25□□□□□ -1.57
CCNFP41002 MTND3P8-201ENST00000412909 339 ntBASIC5.25□□□□□ -1.57
CCNFP41002 CHEK2P3-201ENST00000416118 248 ntBASIC5.25□□□□□ -1.57
CCNFP41002 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC5.25□□□□□ -1.57
CCNFP41002 LYPLA1P1-201ENST00000434514 622 ntBASIC5.25□□□□□ -1.57
CCNFP41002 TTTY22-201ENST00000445253 427 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
CCNFP41002 AL592431.1-201ENST00000451090 317 ntTSL 3 BASIC5.25□□□□□ -1.57
CCNFP41002 MTND3P16-201ENST00000452205 344 ntBASIC5.25□□□□□ -1.57
CCNFP41002 RPS29P15-201ENST00000458329 171 ntBASIC5.25□□□□□ -1.57
CCNFP41002 AL133445.1-201ENST00000467051 452 ntBASIC5.25□□□□□ -1.57
CCNFP41002 AC007537.2-201ENST00000472093 511 ntBASIC5.25□□□□□ -1.57
CCNFP41002 RN7SL184P-201ENST00000488308 297 ntBASIC5.25□□□□□ -1.57
CCNFP41002 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
CCNFP41002 LINC00992-202ENST00000514186 564 ntTSL 5 BASIC5.25□□□□□ -1.57
CCNFP41002 RNA5SP362-201ENST00000516048 118 ntBASIC5.25□□□□□ -1.57
CCNFP41002 RNU4-49P-201ENST00000516080 140 ntBASIC5.25□□□□□ -1.57
CCNFP41002 RNU6-277P-201ENST00000516272 106 ntBASIC5.25□□□□□ -1.57
CCNFP41002 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC5.25□□□□□ -1.57
CCNFP41002 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC5.25□□□□□ -1.57
CCNFP41002 SCOCP1-201ENST00000554676 349 ntBASIC5.25□□□□□ -1.57
CCNFP41002 LINC01904-201ENST00000564872 861 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
CCNFP41002 AC233702.9-201ENST00000581528 203 ntBASIC5.25□□□□□ -1.57
CCNFP41002 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC5.25□□□□□ -1.57
CCNFP41002 AC009597.2-201ENST00000604659 592 ntBASIC5.25□□□□□ -1.57
CCNFP41002 Y_RNA.812-201ENST00000610788 101 ntBASIC5.25□□□□□ -1.57
CCNFP41002 Y_RNA.784-201ENST00000613803 101 ntBASIC5.25□□□□□ -1.57
CCNFP41002 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC5.25□□□□□ -1.57
CCNFP41002 Y_RNA.787-201ENST00000616522 101 ntBASIC5.25□□□□□ -1.57
CCNFP41002 Y_RNA.780-201ENST00000617336 101 ntBASIC5.25□□□□□ -1.57
CCNFP41002 Y_RNA.801-201ENST00000619005 101 ntBASIC5.25□□□□□ -1.57
CCNFP41002 PDE4D-229ENST00000638939 375 ntTSL 5 BASIC5.25□□□□□ -1.57
CCNFP41002 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC5.25□□□□□ -1.57
CCNFP41002 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
CCNFP41002 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC5.25□□□□□ -1.57
CCNFP41002 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
CCNFP41002 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
CCNFP41002 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC5.25□□□□□ -1.57
CCNFP41002 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC5.25□□□□□ -1.57
CCNFP41002 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC5.25□□□□□ -1.57
CCNFP41002 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC5.25□□□□□ -1.57
CCNFP41002 AL731566.1-201ENST00000620490 1937 ntBASIC5.25□□□□□ -1.57
CCNFP41002 MED23-203ENST00000368058 4576 ntTSL 5 BASIC5.24□□□□□ -1.57
CCNFP41002 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
CCNFP41002 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC5.24□□□□□ -1.57
CCNFP41002 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC5.24□□□□□ -1.57
CCNFP41002 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
CCNFP41002 AMY1C-201ENST00000370079 1632 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
CCNFP41002 MIR133B-201ENST00000362210 119 ntBASIC5.24□□□□□ -1.57
CCNFP41002 SNORA62.1-201ENST00000364287 154 ntBASIC5.24□□□□□ -1.57
CCNFP41002 RNA5SP223-201ENST00000365174 120 ntBASIC5.24□□□□□ -1.57
CCNFP41002 IGLV7-43-201ENST00000390298 385 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
CCNFP41002 U3.25-201ENST00000391209 220 ntBASIC5.24□□□□□ -1.57
CCNFP41002 AL133388.1-201ENST00000404509 287 ntBASIC5.24□□□□□ -1.57
CCNFP41002 ZSCAN12P1-201ENST00000406489 419 ntBASIC5.24□□□□□ -1.57
CCNFP41002 U3.32-201ENST00000408116 212 ntBASIC5.24□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 90.5 ms