Protein–RNA interactions for Protein: P31276

HOXC13, Homeobox protein Hox-C13, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC13P31276 AL079342.2-201ENST00000403367 482 ntBASIC4.03□□□□□ -1.76
HOXC13P31276 AL138878.1-201ENST00000405131 347 ntBASIC4.03□□□□□ -1.76
HOXC13P31276 SNORA57.3-201ENST00000411095 141 ntBASIC4.03□□□□□ -1.76
HOXC13P31276 AL136133.1-201ENST00000413694 376 ntBASIC4.03□□□□□ -1.76
HOXC13P31276 ZNF736P2Y-201ENST00000416040 1279 ntBASIC4.03□□□□□ -1.76
HOXC13P31276 BOLA3P4-201ENST00000418151 400 ntBASIC4.03□□□□□ -1.76
HOXC13P31276 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC4.03□□□□□ -1.76
HOXC13P31276 ATP5HP2-201ENST00000433885 485 ntBASIC4.03□□□□□ -1.76
HOXC13P31276 LINC01867-201ENST00000435357 604 ntTSL 2 BASIC4.03□□□□□ -1.76
HOXC13P31276 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC4.03□□□□□ -1.76
HOXC13P31276 PCDH9-AS4-201ENST00000456459 436 ntTSL 3 BASIC4.03□□□□□ -1.76
HOXC13P31276 VPS26AP1-201ENST00000483197 979 ntBASIC4.03□□□□□ -1.76
HOXC13P31276 RPS26P15-201ENST00000488067 348 ntBASIC4.03□□□□□ -1.76
HOXC13P31276 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC4.03□□□□□ -1.76
HOXC13P31276 AC104619.4-201ENST00000510773 249 ntBASIC4.03□□□□□ -1.76
HOXC13P31276 RNU4ATAC6P-201ENST00000516592 126 ntBASIC4.03□□□□□ -1.76
HOXC13P31276 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC4.03□□□□□ -1.76
HOXC13P31276 AC087242.1-201ENST00000536931 572 ntTSL 4 BASIC4.03□□□□□ -1.76
HOXC13P31276 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC4.03□□□□□ -1.76
HOXC13P31276 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC4.03□□□□□ -1.76
HOXC13P31276 MIR5708-201ENST00000579723 85 ntBASIC4.03□□□□□ -1.76
HOXC13P31276 AC091057.3-201ENST00000602684 733 ntBASIC4.03□□□□□ -1.76
HOXC13P31276 MRPS35P3-201ENST00000603189 709 ntBASIC4.03□□□□□ -1.76
HOXC13P31276 AC080013.6-201ENST00000606185 215 ntBASIC4.03□□□□□ -1.76
HOXC13P31276 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC4.03□□□□□ -1.76
HOXC13P31276 AC019176.2-201ENST00000611579 315 ntBASIC4.03□□□□□ -1.76
HOXC13P31276 AC026634.1-201ENST00000634369 198 ntBASIC4.03□□□□□ -1.76
HOXC13P31276 U6.105-201ENST00000637379 88 ntBASIC4.03□□□□□ -1.76
HOXC13P31276 MFSD8-245ENST00000641743 948 ntBASIC4.03□□□□□ -1.76
HOXC13P31276 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC4.03□□□□□ -1.76
HOXC13P31276 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC4.03□□□□□ -1.76
HOXC13P31276 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
HOXC13P31276 AP002001.2-201ENST00000529025 1469 ntBASIC4.03□□□□□ -1.76
HOXC13P31276 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
HOXC13P31276 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC4.03□□□□□ -1.77
HOXC13P31276 AP001486.2-201ENST00000561652 5113 ntBASIC4.02□□□□□ -1.77
HOXC13P31276 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
HOXC13P31276 TAS2R10-201ENST00000240619 1042 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
HOXC13P31276 RNU6-1249P-201ENST00000363237 111 ntBASIC4.02□□□□□ -1.77
HOXC13P31276 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
HOXC13P31276 MTND4LP20-201ENST00000402379 270 ntBASIC4.02□□□□□ -1.77
HOXC13P31276 Z97055.1-201ENST00000419730 712 ntBASIC4.02□□□□□ -1.77
HOXC13P31276 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC4.02□□□□□ -1.77
HOXC13P31276 MTCO2P23-201ENST00000425216 680 ntBASIC4.02□□□□□ -1.77
HOXC13P31276 AC023469.2-201ENST00000425983 657 ntTSL 5 BASIC4.02□□□□□ -1.77
HOXC13P31276 DPRXP1-201ENST00000426312 460 ntBASIC4.02□□□□□ -1.77
HOXC13P31276 RPL31P54-201ENST00000429803 370 ntBASIC4.02□□□□□ -1.77
HOXC13P31276 AC096638.2-201ENST00000434965 711 ntBASIC4.02□□□□□ -1.77
HOXC13P31276 MTCYBP31-201ENST00000438855 1122 ntBASIC4.02□□□□□ -1.77
HOXC13P31276 LINC00376-201ENST00000439454 693 ntTSL 5 BASIC4.02□□□□□ -1.77
HOXC13P31276 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC4.02□□□□□ -1.77
HOXC13P31276 RPS3AP12-201ENST00000443616 753 ntBASIC4.02□□□□□ -1.77
HOXC13P31276 AC104073.1-201ENST00000451988 151 ntBASIC4.02□□□□□ -1.77
HOXC13P31276 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC4.02□□□□□ -1.77
HOXC13P31276 RPL21P11-201ENST00000461458 483 ntBASIC4.02□□□□□ -1.77
HOXC13P31276 AC093864.1-201ENST00000504555 745 ntTSL 5 BASIC4.02□□□□□ -1.77
HOXC13P31276 AC006499.5-201ENST00000505037 514 ntBASIC4.02□□□□□ -1.77
HOXC13P31276 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC4.02□□□□□ -1.77
HOXC13P31276 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC4.02□□□□□ -1.77
HOXC13P31276 AL117351.2-201ENST00000513571 157 ntBASIC4.02□□□□□ -1.77
HOXC13P31276 AC104619.2-201ENST00000514293 646 ntTSL 3 BASIC4.02□□□□□ -1.77
HOXC13P31276 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC4.02□□□□□ -1.77
HOXC13P31276 RN7SKP13-201ENST00000515933 244 ntBASIC4.02□□□□□ -1.77
HOXC13P31276 RN7SKP265-201ENST00000516448 223 ntBASIC4.02□□□□□ -1.77
HOXC13P31276 RN7SKP287-201ENST00000516546 266 ntBASIC4.02□□□□□ -1.77
HOXC13P31276 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC4.02□□□□□ -1.77
HOXC13P31276 AL163153.1-201ENST00000554223 283 ntBASIC4.02□□□□□ -1.77
HOXC13P31276 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC4.02□□□□□ -1.77
HOXC13P31276 AC114546.1-201ENST00000560140 473 ntTSL 3 BASIC4.02□□□□□ -1.77
HOXC13P31276 AP005901.2-201ENST00000581690 525 ntTSL 3 BASIC4.02□□□□□ -1.77
HOXC13P31276 AP005230.1-201ENST00000585072 675 ntTSL 5 BASIC4.02□□□□□ -1.77
HOXC13P31276 AC011471.1-201ENST00000585766 187 ntBASIC4.02□□□□□ -1.77
HOXC13P31276 NIFKP6-201ENST00000598115 845 ntBASIC4.02□□□□□ -1.77
HOXC13P31276 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC4.02□□□□□ -1.77
HOXC13P31276 AC093424.1-201ENST00000604999 338 ntBASIC4.02□□□□□ -1.77
HOXC13P31276 AC080013.3-201ENST00000606839 578 ntBASIC4.02□□□□□ -1.77
HOXC13P31276 AL159169.3-201ENST00000608871 561 ntBASIC4.02□□□□□ -1.77
HOXC13P31276 AL442067.2-201ENST00000614033 363 ntBASIC4.02□□□□□ -1.77
HOXC13P31276 AC008121.2-201ENST00000614647 523 ntBASIC4.02□□□□□ -1.77
HOXC13P31276 CT45A10-202ENST00000617981 578 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
HOXC13P31276 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
HOXC13P31276 AP000676.4-201ENST00000624659 623 ntBASIC4.02□□□□□ -1.77
HOXC13P31276 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
HOXC13P31276 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
HOXC13P31276 THUMPD3P1-201ENST00000506556 1480 ntBASIC4.02□□□□□ -1.77
HOXC13P31276 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
HOXC13P31276 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
HOXC13P31276 AC021237.1-201ENST00000504175 1643 ntTSL 2 BASIC4.02□□□□□ -1.77
HOXC13P31276 AC005183.1-201ENST00000603687 1979 ntBASIC4.02□□□□□ -1.77
HOXC13P31276 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC4.01□□□□□ -1.77
HOXC13P31276 RNA5SP97-201ENST00000365006 84 ntBASIC4.01□□□□□ -1.77
HOXC13P31276 ZNF602P-201ENST00000405929 924 ntBASIC4.01□□□□□ -1.77
HOXC13P31276 CLK1-203ENST00000409769 1192 ntTSL 2 BASIC4.01□□□□□ -1.77
HOXC13P31276 AC106883.1-201ENST00000418805 562 ntBASIC4.01□□□□□ -1.77
HOXC13P31276 C1DP1-201ENST00000426049 402 ntBASIC4.01□□□□□ -1.77
HOXC13P31276 MTCO1P3-201ENST00000429327 192 ntBASIC4.01□□□□□ -1.77
HOXC13P31276 ARF4P2-201ENST00000430209 526 ntBASIC4.01□□□□□ -1.77
HOXC13P31276 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC4.01□□□□□ -1.77
HOXC13P31276 VN1R108P-201ENST00000431580 830 ntBASIC4.01□□□□□ -1.77
HOXC13P31276 SEPT7P5-201ENST00000434048 306 ntBASIC4.01□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 105 ms