Protein–RNA interactions for Protein: P31271

HOXA13, Homeobox protein Hox-A13, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA13P31271 ADAM18-206ENST00000520772 1429 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
HOXA13P31271 AL133412.1-201ENST00000380194 2992 ntBASIC4.11□□□□□ -1.75
HOXA13P31271 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC4.11□□□□□ -1.75
HOXA13P31271 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC4.11□□□□□ -1.75
HOXA13P31271 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
HOXA13P31271 MTCO1P12-201ENST00000414273 1543 ntBASIC4.11□□□□□ -1.75
HOXA13P31271 AC130650.2-201ENST00000618736 2403 ntBASIC4.11□□□□□ -1.75
HOXA13P31271 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC4.11□□□□□ -1.75
HOXA13P31271 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
HOXA13P31271 RN7SKP44-201ENST00000363602 316 ntBASIC4.11□□□□□ -1.75
HOXA13P31271 RNU4-28P-201ENST00000364739 141 ntBASIC4.11□□□□□ -1.75
HOXA13P31271 Y_RNA.311-201ENST00000365068 96 ntBASIC4.11□□□□□ -1.75
HOXA13P31271 SNORA70.4-201ENST00000365509 134 ntBASIC4.11□□□□□ -1.75
HOXA13P31271 RNU6-83P-201ENST00000384568 112 ntBASIC4.11□□□□□ -1.75
HOXA13P31271 MIR183-201ENST00000384958 110 ntBASIC4.11□□□□□ -1.75
HOXA13P31271 AC016769.3-201ENST00000396562 315 ntBASIC4.11□□□□□ -1.75
HOXA13P31271 TANK-206ENST00000406287 875 ntTSL 5 BASIC4.11□□□□□ -1.75
HOXA13P31271 HSPE1P8-201ENST00000406997 288 ntBASIC4.11□□□□□ -1.75
HOXA13P31271 RNA5SP39-201ENST00000411245 120 ntBASIC4.11□□□□□ -1.75
HOXA13P31271 CRYBB2P1-203ENST00000415709 538 ntBASIC4.11□□□□□ -1.75
HOXA13P31271 AC004543.1-201ENST00000418764 369 ntTSL 5 BASIC4.11□□□□□ -1.75
HOXA13P31271 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC4.11□□□□□ -1.75
HOXA13P31271 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC4.11□□□□□ -1.75
HOXA13P31271 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC4.11□□□□□ -1.75
HOXA13P31271 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC4.11□□□□□ -1.75
HOXA13P31271 AL050303.1-201ENST00000444356 458 ntTSL 2 BASIC4.11□□□□□ -1.75
HOXA13P31271 AC099563.1-201ENST00000456086 418 ntBASIC4.11□□□□□ -1.75
HOXA13P31271 CREM-226ENST00000469949 721 ntTSL 3 BASIC4.11□□□□□ -1.75
HOXA13P31271 AC093767.1-201ENST00000504523 156 ntBASIC4.11□□□□□ -1.75
HOXA13P31271 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC4.11□□□□□ -1.75
HOXA13P31271 RN7SKP209-201ENST00000516888 304 ntBASIC4.11□□□□□ -1.75
HOXA13P31271 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC4.11□□□□□ -1.75
HOXA13P31271 MTATP6P15-201ENST00000527233 835 ntBASIC4.11□□□□□ -1.75
HOXA13P31271 AC107016.1-201ENST00000550463 337 ntBASIC4.11□□□□□ -1.75
HOXA13P31271 AL512347.1-201ENST00000566420 503 ntBASIC4.11□□□□□ -1.75
HOXA13P31271 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC4.11□□□□□ -1.75
HOXA13P31271 AC006116.10-201ENST00000591836 581 ntBASIC4.11□□□□□ -1.75
HOXA13P31271 VN1R78P-201ENST00000597393 564 ntBASIC4.11□□□□□ -1.75
HOXA13P31271 AL353778.1-201ENST00000603149 408 ntBASIC4.11□□□□□ -1.75
HOXA13P31271 DAOA-AS1_2.2-201ENST00000610818 204 ntBASIC4.11□□□□□ -1.75
HOXA13P31271 AC008083.4-201ENST00000615076 444 ntBASIC4.11□□□□□ -1.75
HOXA13P31271 AC090116.1-201ENST00000615679 446 ntBASIC4.11□□□□□ -1.75
HOXA13P31271 AC021755.4-201ENST00000616620 456 ntBASIC4.11□□□□□ -1.75
HOXA13P31271 AC015967.1-201ENST00000619893 476 ntBASIC4.11□□□□□ -1.75
HOXA13P31271 U4.6-201ENST00000621618 127 ntBASIC4.11□□□□□ -1.75
HOXA13P31271 FP475955.2-201ENST00000623720 458 ntTSL 2 BASIC4.11□□□□□ -1.75
HOXA13P31271 AL365440.1-201ENST00000436135 2167 ntBASIC4.11□□□□□ -1.75
HOXA13P31271 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
HOXA13P31271 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC4.11□□□□□ -1.75
HOXA13P31271 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
HOXA13P31271 AC018555.1-201ENST00000567548 1980 ntBASIC4.11□□□□□ -1.75
HOXA13P31271 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC4.11□□□□□ -1.75
HOXA13P31271 ZNF734P-201ENST00000419494 1534 ntBASIC4.11□□□□□ -1.75
HOXA13P31271 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC4.1□□□□□ -1.75
HOXA13P31271 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
HOXA13P31271 TAS2R30-201ENST00000539585 1687 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
HOXA13P31271 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC4.1□□□□□ -1.75
HOXA13P31271 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
HOXA13P31271 RNU6-216P-201ENST00000363282 104 ntBASIC4.1□□□□□ -1.75
HOXA13P31271 SNORD82-201ENST00000365530 70 ntBASIC4.1□□□□□ -1.75
HOXA13P31271 SNORA51.6-201ENST00000384151 125 ntBASIC4.1□□□□□ -1.75
HOXA13P31271 EIF5P1-201ENST00000400019 1231 ntBASIC4.1□□□□□ -1.75
HOXA13P31271 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC4.1□□□□□ -1.75
HOXA13P31271 RPL31P2-201ENST00000413849 377 ntBASIC4.1□□□□□ -1.75
HOXA13P31271 AC006946.1-201ENST00000429106 328 ntBASIC4.1□□□□□ -1.75
HOXA13P31271 RPS6P12-201ENST00000432491 726 ntBASIC4.1□□□□□ -1.75
HOXA13P31271 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC4.1□□□□□ -1.75
HOXA13P31271 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC4.1□□□□□ -1.75
HOXA13P31271 AL590399.6-201ENST00000446396 307 ntBASIC4.1□□□□□ -1.75
HOXA13P31271 PRDX3P3-201ENST00000447765 522 ntBASIC4.1□□□□□ -1.75
HOXA13P31271 IQCG-204ENST00000453254 1230 ntTSL 2 BASIC4.1□□□□□ -1.75
HOXA13P31271 snoU13.22-201ENST00000459428 104 ntBASIC4.1□□□□□ -1.75
HOXA13P31271 RPL7P18-201ENST00000478965 734 ntBASIC4.1□□□□□ -1.75
HOXA13P31271 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC4.1□□□□□ -1.75
HOXA13P31271 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC4.1□□□□□ -1.75
HOXA13P31271 AC010587.2-201ENST00000511727 448 ntBASIC4.1□□□□□ -1.75
HOXA13P31271 RNU5A-4P-201ENST00000516588 111 ntBASIC4.1□□□□□ -1.75
HOXA13P31271 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC4.1□□□□□ -1.75
HOXA13P31271 UBTFL10-201ENST00000528532 562 ntBASIC4.1□□□□□ -1.75
HOXA13P31271 AC022367.1-202ENST00000535066 537 ntTSL 3 BASIC4.1□□□□□ -1.75
HOXA13P31271 OR6C73P-201ENST00000546432 358 ntBASIC4.1□□□□□ -1.75
HOXA13P31271 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC4.1□□□□□ -1.75
HOXA13P31271 CASC16-202ENST00000563844 610 ntTSL 3 BASIC4.1□□□□□ -1.75
HOXA13P31271 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC4.1□□□□□ -1.75
HOXA13P31271 AC005412.1-201ENST00000580812 1049 ntBASIC4.1□□□□□ -1.75
HOXA13P31271 AC007673.1-201ENST00000590604 1100 ntTSL 5 BASIC4.1□□□□□ -1.75
HOXA13P31271 AC006077.1-201ENST00000604746 343 ntBASIC4.1□□□□□ -1.75
HOXA13P31271 AC012468.1-201ENST00000604888 430 ntBASIC4.1□□□□□ -1.75
HOXA13P31271 AC006270.3-201ENST00000605967 1036 ntBASIC4.1□□□□□ -1.75
HOXA13P31271 AC092354.2-201ENST00000607786 514 ntBASIC4.1□□□□□ -1.75
HOXA13P31271 AC093783.1-201ENST00000612976 329 ntBASIC4.1□□□□□ -1.75
HOXA13P31271 AC092650.2-201ENST00000619984 902 ntBASIC4.1□□□□□ -1.75
HOXA13P31271 AL732618.1-201ENST00000623251 301 ntBASIC4.1□□□□□ -1.75
HOXA13P31271 AC006065.5-201ENST00000623427 349 ntBASIC4.1□□□□□ -1.75
HOXA13P31271 AP003485.2-201ENST00000623636 610 ntBASIC4.1□□□□□ -1.75
HOXA13P31271 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
HOXA13P31271 MIR4278-201ENST00000636094 69 ntBASIC4.1□□□□□ -1.75
HOXA13P31271 AC244258.1-201ENST00000637553 1071 ntBASIC4.1□□□□□ -1.75
HOXA13P31271 NF1-214ENST00000490416 1329 ntTSL 3 BASIC4.1□□□□□ -1.75
HOXA13P31271 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 116.1 ms