Protein–RNA interactions for Protein: P29973

CNGA1, cGMP-gated cation channel alpha-1, humanhuman

Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1P29973 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC5.16□□□□□ -1.58
CNGA1P29973 HMGB3P26-201ENST00000560051 582 ntBASIC5.16□□□□□ -1.58
CNGA1P29973 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC5.16□□□□□ -1.58
CNGA1P29973 AC107954.1-201ENST00000565906 727 ntBASIC5.16□□□□□ -1.58
CNGA1P29973 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC5.16□□□□□ -1.58
CNGA1P29973 MIR4429-201ENST00000580105 73 ntBASIC5.16□□□□□ -1.58
CNGA1P29973 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC5.16□□□□□ -1.58
CNGA1P29973 AL157938.2-204ENST00000589667 826 ntTSL 5 BASIC5.16□□□□□ -1.58
CNGA1P29973 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC5.16□□□□□ -1.58
CNGA1P29973 AC087683.1-201ENST00000591187 441 ntBASIC5.16□□□□□ -1.58
CNGA1P29973 TPMTP1-201ENST00000592307 737 ntBASIC5.16□□□□□ -1.58
CNGA1P29973 AC004160.1-202ENST00000599917 578 ntTSL 5 BASIC5.16□□□□□ -1.58
CNGA1P29973 AC078795.2-201ENST00000602835 1252 ntBASIC5.16□□□□□ -1.58
CNGA1P29973 AC004853.1-201ENST00000604902 698 ntBASIC5.16□□□□□ -1.58
CNGA1P29973 AL365503.1-201ENST00000605247 905 ntBASIC5.16□□□□□ -1.58
CNGA1P29973 AL591034.3-201ENST00000605511 685 ntBASIC5.16□□□□□ -1.58
CNGA1P29973 AL451086.1-201ENST00000605596 223 ntBASIC5.16□□□□□ -1.58
CNGA1P29973 RNA5SP108-201ENST00000605921 117 ntBASIC5.16□□□□□ -1.58
CNGA1P29973 AL139286.2-201ENST00000606838 396 ntBASIC5.16□□□□□ -1.58
CNGA1P29973 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC5.16□□□□□ -1.58
CNGA1P29973 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC5.16□□□□□ -1.58
CNGA1P29973 RNA5SP196-201ENST00000625967 102 ntBASIC5.16□□□□□ -1.58
CNGA1P29973 EVI2A-202ENST00000461237 1540 ntAPPRIS ALT2 TSL 4 BASIC5.16□□□□□ -1.58
CNGA1P29973 AC107068.1-201ENST00000563286 4218 ntBASIC5.15□□□□□ -1.58
CNGA1P29973 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
CNGA1P29973 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC5.15□□□□□ -1.58
CNGA1P29973 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC5.15□□□□□ -1.58
CNGA1P29973 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
CNGA1P29973 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
CNGA1P29973 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
CNGA1P29973 AP000580.1-201ENST00000404439 358 ntBASIC5.15□□□□□ -1.59
CNGA1P29973 Y_RNA.598-201ENST00000410480 95 ntBASIC5.15□□□□□ -1.59
CNGA1P29973 SNRPFP1-201ENST00000414761 252 ntBASIC5.15□□□□□ -1.59
CNGA1P29973 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC5.15□□□□□ -1.59
CNGA1P29973 NMNAT1P2-201ENST00000435192 860 ntBASIC5.15□□□□□ -1.59
CNGA1P29973 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC5.15□□□□□ -1.59
CNGA1P29973 AC092641.1-201ENST00000440229 772 ntBASIC5.15□□□□□ -1.59
CNGA1P29973 AL590365.1-201ENST00000450788 243 ntBASIC5.15□□□□□ -1.59
CNGA1P29973 IMMP2L-205ENST00000450877 761 ntTSL 2 BASIC5.15□□□□□ -1.59
CNGA1P29973 AL353691.1-201ENST00000451332 387 ntBASIC5.15□□□□□ -1.59
CNGA1P29973 HMGB1P25-201ENST00000468402 607 ntBASIC5.15□□□□□ -1.59
CNGA1P29973 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
CNGA1P29973 SAP18P1-201ENST00000512058 390 ntBASIC5.15□□□□□ -1.59
CNGA1P29973 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC5.15□□□□□ -1.59
CNGA1P29973 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC5.15□□□□□ -1.59
CNGA1P29973 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
CNGA1P29973 AP000827.1-201ENST00000527814 258 ntBASIC5.15□□□□□ -1.59
CNGA1P29973 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC5.15□□□□□ -1.59
CNGA1P29973 AL358333.1-201ENST00000555115 467 ntTSL 3 BASIC5.15□□□□□ -1.59
CNGA1P29973 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC5.15□□□□□ -1.59
CNGA1P29973 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC5.15□□□□□ -1.59
CNGA1P29973 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC5.15□□□□□ -1.59
CNGA1P29973 AC079089.3-201ENST00000603094 673 ntBASIC5.15□□□□□ -1.59
CNGA1P29973 AC112191.3-201ENST00000604371 277 ntBASIC5.15□□□□□ -1.59
CNGA1P29973 AC138749.5-201ENST00000611461 208 ntBASIC5.15□□□□□ -1.59
CNGA1P29973 AC116165.2-201ENST00000616705 206 ntBASIC5.15□□□□□ -1.59
CNGA1P29973 MIR3653-201ENST00000625572 110 ntBASIC5.15□□□□□ -1.59
CNGA1P29973 DHX9P1-201ENST00000436565 3076 ntBASIC5.15□□□□□ -1.59
CNGA1P29973 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
CNGA1P29973 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC5.15□□□□□ -1.59
CNGA1P29973 ACTR3BP2-202ENST00000623630 1338 ntBASIC5.15□□□□□ -1.59
CNGA1P29973 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
CNGA1P29973 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC5.15□□□□□ -1.59
CNGA1P29973 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC5.15□□□□□ -1.59
CNGA1P29973 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC5.15□□□□□ -1.59
CNGA1P29973 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC5.14□□□□□ -1.59
CNGA1P29973 LDHAL6CP-202ENST00000550738 3224 ntBASIC5.14□□□□□ -1.59
CNGA1P29973 MFSD8-242ENST00000641690 4199 ntBASIC5.14□□□□□ -1.59
CNGA1P29973 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
CNGA1P29973 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
CNGA1P29973 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
CNGA1P29973 SPRR2C-201ENST00000290702 219 ntBASIC5.14□□□□□ -1.59
CNGA1P29973 RNU6-263P-201ENST00000363811 107 ntBASIC5.14□□□□□ -1.59
CNGA1P29973 RNA5SP366-201ENST00000365454 123 ntBASIC5.14□□□□□ -1.59
CNGA1P29973 RNU6-359P-201ENST00000365466 108 ntBASIC5.14□□□□□ -1.59
CNGA1P29973 RNU6-348P-201ENST00000384386 107 ntBASIC5.14□□□□□ -1.59
CNGA1P29973 Y_RNA.505-201ENST00000384489 102 ntBASIC5.14□□□□□ -1.59
CNGA1P29973 RNU1-13P-201ENST00000384499 162 ntBASIC5.14□□□□□ -1.59
CNGA1P29973 AL022722.2-201ENST00000402519 180 ntBASIC5.14□□□□□ -1.59
CNGA1P29973 AC245052.5-201ENST00000416320 649 ntBASIC5.14□□□□□ -1.59
CNGA1P29973 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC5.14□□□□□ -1.59
CNGA1P29973 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC5.14□□□□□ -1.59
CNGA1P29973 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC5.14□□□□□ -1.59
CNGA1P29973 MRPS18BP2-201ENST00000434310 759 ntBASIC5.14□□□□□ -1.59
CNGA1P29973 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC5.14□□□□□ -1.59
CNGA1P29973 SKP1P1-201ENST00000438081 489 ntBASIC5.14□□□□□ -1.59
CNGA1P29973 AL031667.1-201ENST00000440222 725 ntBASIC5.14□□□□□ -1.59
CNGA1P29973 Z82190.1-201ENST00000454534 490 ntBASIC5.14□□□□□ -1.59
CNGA1P29973 OR9M1P-201ENST00000459641 921 ntBASIC5.14□□□□□ -1.59
CNGA1P29973 AC112204.1-201ENST00000502591 103 ntBASIC5.14□□□□□ -1.59
CNGA1P29973 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
CNGA1P29973 AC023632.4-201ENST00000517783 191 ntBASIC5.14□□□□□ -1.59
CNGA1P29973 AP003730.1-201ENST00000524605 285 ntBASIC5.14□□□□□ -1.59
CNGA1P29973 AC022878.1-201ENST00000530684 149 ntBASIC5.14□□□□□ -1.59
CNGA1P29973 OR8R1P-201ENST00000543943 764 ntBASIC5.14□□□□□ -1.59
CNGA1P29973 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC5.14□□□□□ -1.59
CNGA1P29973 IGKV1OR2-118-201ENST00000603238 347 ntBASIC5.14□□□□□ -1.59
CNGA1P29973 AL451044.1-201ENST00000604867 238 ntBASIC5.14□□□□□ -1.59
CNGA1P29973 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC5.14□□□□□ -1.59
CNGA1P29973 U73479.1-201ENST00000618062 168 ntBASIC5.14□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 142.9 ms