Protein–RNA interactions for Protein: P20036

HLA-DPA1, HLA class II histocompatibility antigen, DP alpha 1 chain, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1P20036 AC245389.1-201ENST00000605141 529 ntBASIC3.66□□□□□ -1.82
HLA-DPA1P20036 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC3.66□□□□□ -1.82
HLA-DPA1P20036 AC010975.3-201ENST00000618727 978 ntBASIC3.66□□□□□ -1.82
HLA-DPA1P20036 U6.101-201ENST00000637707 76 ntBASIC3.66□□□□□ -1.82
HLA-DPA1P20036 MKKS-204ENST00000639674 192 ntBASIC3.66□□□□□ -1.82
HLA-DPA1P20036 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
HLA-DPA1P20036 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
HLA-DPA1P20036 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC3.66□□□□□ -1.82
HLA-DPA1P20036 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
HLA-DPA1P20036 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC3.66□□□□□ -1.82
HLA-DPA1P20036 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
HLA-DPA1P20036 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
HLA-DPA1P20036 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC3.65□□□□□ -1.82
HLA-DPA1P20036 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
HLA-DPA1P20036 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
HLA-DPA1P20036 Y_RNA.25-201ENST00000362528 102 ntBASIC3.65□□□□□ -1.83
HLA-DPA1P20036 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.83
HLA-DPA1P20036 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
HLA-DPA1P20036 AL391417.1-201ENST00000404100 426 ntBASIC3.65□□□□□ -1.83
HLA-DPA1P20036 ATP5A1P2-201ENST00000412323 255 ntBASIC3.65□□□□□ -1.83
HLA-DPA1P20036 MTND4P3-201ENST00000417829 541 ntBASIC3.65□□□□□ -1.83
HLA-DPA1P20036 AC011242.1-201ENST00000433596 1158 ntBASIC3.65□□□□□ -1.83
HLA-DPA1P20036 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
HLA-DPA1P20036 CASP12-207ENST00000447913 819 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
HLA-DPA1P20036 RPS3AP46-201ENST00000448352 682 ntBASIC3.65□□□□□ -1.83
HLA-DPA1P20036 AC112492.1-201ENST00000449607 712 ntBASIC3.65□□□□□ -1.83
HLA-DPA1P20036 RPL7P15-201ENST00000461190 712 ntBASIC3.65□□□□□ -1.83
HLA-DPA1P20036 AC005699.1-201ENST00000510095 555 ntTSL 3 BASIC3.65□□□□□ -1.83
HLA-DPA1P20036 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC3.65□□□□□ -1.83
HLA-DPA1P20036 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC3.65□□□□□ -1.83
HLA-DPA1P20036 CHCHD7-209ENST00000519367 442 ntTSL 3 BASIC3.65□□□□□ -1.83
HLA-DPA1P20036 LINC01932-201ENST00000520323 573 ntTSL 5 BASIC3.65□□□□□ -1.83
HLA-DPA1P20036 AP003386.1-201ENST00000526509 504 ntTSL 3 BASIC3.65□□□□□ -1.83
HLA-DPA1P20036 AC012170.3-201ENST00000560159 297 ntTSL 2 BASIC3.65□□□□□ -1.83
HLA-DPA1P20036 GTF2IP8-201ENST00000560687 584 ntBASIC3.65□□□□□ -1.83
HLA-DPA1P20036 AC135050.5-201ENST00000576336 543 ntTSL 4 BASIC3.65□□□□□ -1.83
HLA-DPA1P20036 MIR5047-201ENST00000579212 100 ntBASIC3.65□□□□□ -1.83
HLA-DPA1P20036 COX6CP3-201ENST00000580869 223 ntBASIC3.65□□□□□ -1.83
HLA-DPA1P20036 BNIP3P24-201ENST00000593398 557 ntBASIC3.65□□□□□ -1.83
HLA-DPA1P20036 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC3.65□□□□□ -1.83
HLA-DPA1P20036 AF230666.1-202ENST00000608375 870 ntTSL 5 BASIC3.65□□□□□ -1.83
HLA-DPA1P20036 AC093673.2-201ENST00000609674 331 ntBASIC3.65□□□□□ -1.83
HLA-DPA1P20036 AL121772.2-201ENST00000614331 297 ntBASIC3.65□□□□□ -1.83
HLA-DPA1P20036 AC039056.2-201ENST00000622261 511 ntBASIC3.65□□□□□ -1.83
HLA-DPA1P20036 AC134980.1-211ENST00000638243 1094 ntTSL 2 BASIC3.65□□□□□ -1.83
HLA-DPA1P20036 OR5H6-202ENST00000641416 1032 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
HLA-DPA1P20036 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
HLA-DPA1P20036 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
HLA-DPA1P20036 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC3.65□□□□□ -1.83
HLA-DPA1P20036 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC3.65□□□□□ -1.83
HLA-DPA1P20036 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC3.65□□□□□ -1.83
HLA-DPA1P20036 AL161912.2-201ENST00000565707 3007 ntBASIC3.65□□□□□ -1.83
HLA-DPA1P20036 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC3.64□□□□□ -1.83
HLA-DPA1P20036 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
HLA-DPA1P20036 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC3.64□□□□□ -1.83
HLA-DPA1P20036 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
HLA-DPA1P20036 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
HLA-DPA1P20036 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
HLA-DPA1P20036 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3.64□□□□□ -1.83
HLA-DPA1P20036 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
HLA-DPA1P20036 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC3.64□□□□□ -1.83
HLA-DPA1P20036 RNA5SP124-201ENST00000362739 110 ntBASIC3.64□□□□□ -1.83
HLA-DPA1P20036 MIR506-201ENST00000384998 124 ntBASIC3.64□□□□□ -1.83
HLA-DPA1P20036 SNORA48.7-201ENST00000391302 135 ntBASIC3.64□□□□□ -1.83
HLA-DPA1P20036 PTMAP2-201ENST00000397627 327 ntBASIC3.64□□□□□ -1.83
HLA-DPA1P20036 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC3.64□□□□□ -1.83
HLA-DPA1P20036 AC011891.1-201ENST00000437088 432 ntTSL 3 BASIC3.64□□□□□ -1.83
HLA-DPA1P20036 AL157359.2-201ENST00000440372 784 ntTSL 3 BASIC3.64□□□□□ -1.83
HLA-DPA1P20036 RFC5P1-201ENST00000454419 874 ntBASIC3.64□□□□□ -1.83
HLA-DPA1P20036 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC3.64□□□□□ -1.83
HLA-DPA1P20036 ARPC3P2-201ENST00000457786 533 ntBASIC3.64□□□□□ -1.83
HLA-DPA1P20036 PNPLA4P1-201ENST00000458328 305 ntBASIC3.64□□□□□ -1.83
HLA-DPA1P20036 RPL6P9-201ENST00000466502 859 ntBASIC3.64□□□□□ -1.83
HLA-DPA1P20036 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC3.64□□□□□ -1.83
HLA-DPA1P20036 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC3.64□□□□□ -1.83
HLA-DPA1P20036 TRMT10BP1-201ENST00000519377 943 ntBASIC3.64□□□□□ -1.83
HLA-DPA1P20036 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
HLA-DPA1P20036 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC3.64□□□□□ -1.83
HLA-DPA1P20036 AL391156.1-201ENST00000554965 554 ntBASIC3.64□□□□□ -1.83
HLA-DPA1P20036 AL121576.1-201ENST00000556055 276 ntBASIC3.64□□□□□ -1.83
HLA-DPA1P20036 AC078909.1-201ENST00000559509 464 ntTSL 2 BASIC3.64□□□□□ -1.83
HLA-DPA1P20036 AC009019.1-202ENST00000568410 405 ntTSL 3 BASIC3.64□□□□□ -1.83
HLA-DPA1P20036 AP005230.1-201ENST00000585072 675 ntTSL 5 BASIC3.64□□□□□ -1.83
HLA-DPA1P20036 STARD13-AS-208ENST00000589472 859 ntTSL 5 BASIC3.64□□□□□ -1.83
HLA-DPA1P20036 AC006254.3-201ENST00000603353 884 ntBASIC3.64□□□□□ -1.83
HLA-DPA1P20036 AC006077.1-201ENST00000604746 343 ntBASIC3.64□□□□□ -1.83
HLA-DPA1P20036 AC068831.7-201ENST00000616954 363 ntBASIC3.64□□□□□ -1.83
HLA-DPA1P20036 AC006133.1-201ENST00000617106 264 ntBASIC3.64□□□□□ -1.83
HLA-DPA1P20036 AC069209.1-201ENST00000619282 651 ntBASIC3.64□□□□□ -1.83
HLA-DPA1P20036 AL353748.2-201ENST00000622148 471 ntBASIC3.64□□□□□ -1.83
HLA-DPA1P20036 C7orf66-201ENST00000624695 435 ntTSL 2 BASIC3.64□□□□□ -1.83
HLA-DPA1P20036 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC3.64□□□□□ -1.83
HLA-DPA1P20036 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.64□□□□□ -1.83
HLA-DPA1P20036 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
HLA-DPA1P20036 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
HLA-DPA1P20036 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.63□□□□□ -1.83
HLA-DPA1P20036 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC3.63□□□□□ -1.83
HLA-DPA1P20036 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
HLA-DPA1P20036 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
HLA-DPA1P20036 ARPP19-211ENST00000568196 1489 ntTSL 2 BASIC3.63□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 99.2 ms