Protein–RNA interactions for Protein: P17096

HMGA1, High mobility group protein HMG-I/HMG-Y, humanhuman

Known RBP Predictions only

Length 107 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P17096 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
HMGA1P17096 Z82195.2-201ENST00000612348 18351 ntBASIC2.44□□□□□ -2.02
HMGA1P17096 ANKRD62P1-201ENST00000434304 1623 ntBASIC2.44□□□□□ -2.02
HMGA1P17096 RNU1-73P-201ENST00000383971 164 ntBASIC2.44□□□□□ -2.02
HMGA1P17096 RNU6ATAC37P-201ENST00000408328 131 ntBASIC2.44□□□□□ -2.02
HMGA1P17096 RPS12P2-201ENST00000439728 269 ntBASIC2.44□□□□□ -2.02
HMGA1P17096 HMGN1P5-201ENST00000448591 263 ntBASIC2.44□□□□□ -2.02
HMGA1P17096 AC233982.1-201ENST00000451247 436 ntBASIC2.44□□□□□ -2.02
HMGA1P17096 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC2.44□□□□□ -2.02
HMGA1P17096 AC239798.3-201ENST00000454459 408 ntBASIC2.44□□□□□ -2.02
HMGA1P17096 RPL23AP49-201ENST00000492925 468 ntBASIC2.44□□□□□ -2.02
HMGA1P17096 ACTR6P1-201ENST00000514311 1104 ntBASIC2.44□□□□□ -2.02
HMGA1P17096 LINC01481-201ENST00000552998 629 ntTSL 2 BASIC2.44□□□□□ -2.02
HMGA1P17096 AC025281.1-201ENST00000567026 265 ntBASIC2.44□□□□□ -2.02
HMGA1P17096 AC016493.1-201ENST00000586106 688 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
HMGA1P17096 AC083899.3-201ENST00000603413 594 ntBASIC2.44□□□□□ -2.02
HMGA1P17096 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC2.44□□□□□ -2.02
HMGA1P17096 AL138828.1-203ENST00000419926 1570 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
HMGA1P17096 RMST-202ENST00000541282 2099 ntTSL 2 BASIC2.43□□□□□ -2.02
HMGA1P17096 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.43□□□□□ -2.02
HMGA1P17096 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
HMGA1P17096 AC009313.2-201ENST00000417893 1941 ntBASIC2.43□□□□□ -2.02
HMGA1P17096 MIR21-201ENST00000362134 72 ntBASIC2.43□□□□□ -2.02
HMGA1P17096 CYCSP45-201ENST00000402289 315 ntBASIC2.43□□□□□ -2.02
HMGA1P17096 AL024474.1-201ENST00000404655 591 ntBASIC2.43□□□□□ -2.02
HMGA1P17096 FAT1P1-201ENST00000406588 507 ntBASIC2.43□□□□□ -2.02
HMGA1P17096 AC107081.1-201ENST00000414975 361 ntBASIC2.43□□□□□ -2.02
HMGA1P17096 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC2.43□□□□□ -2.02
HMGA1P17096 RPL36AP6-201ENST00000435770 321 ntBASIC2.43□□□□□ -2.02
HMGA1P17096 RN7SL499P-201ENST00000481141 276 ntBASIC2.43□□□□□ -2.02
HMGA1P17096 THAP6-203ENST00000502620 582 ntTSL 3 BASIC2.43□□□□□ -2.02
HMGA1P17096 AC112695.1-201ENST00000504213 592 ntTSL 2 BASIC2.43□□□□□ -2.02
HMGA1P17096 YWHAEP4-201ENST00000505390 198 ntBASIC2.43□□□□□ -2.02
HMGA1P17096 HIGD1AP10-201ENST00000527837 282 ntBASIC2.43□□□□□ -2.02
HMGA1P17096 LINC02399-201ENST00000547094 400 ntTSL 2 BASIC2.43□□□□□ -2.02
HMGA1P17096 MIR1273D-201ENST00000577266 86 ntBASIC2.43□□□□□ -2.02
HMGA1P17096 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC2.43□□□□□ -2.02
HMGA1P17096 HSPE1-MOB4-201ENST00000604458 890 ntAPPRIS P1 TSL 3 BASIC2.43□□□□□ -2.02
HMGA1P17096 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC2.43□□□□□ -2.02
HMGA1P17096 LINC02098-202ENST00000609260 554 ntTSL 3 BASIC2.43□□□□□ -2.02
HMGA1P17096 5S_rRNA.12-201ENST00000617631 107 ntBASIC2.43□□□□□ -2.02
HMGA1P17096 AC000123.2-201ENST00000623124 461 ntBASIC2.43□□□□□ -2.02
HMGA1P17096 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
HMGA1P17096 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC2.43□□□□□ -2.02
HMGA1P17096 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC2.43□□□□□ -2.02
HMGA1P17096 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC2.43□□□□□ -2.02
HMGA1P17096 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
HMGA1P17096 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
HMGA1P17096 OR11H4-202ENST00000641082 1585 ntAPPRIS P1 BASIC2.42□□□□□ -2.02
HMGA1P17096 OR51F1-201ENST00000380383 960 ntAPPRIS P5 BASIC2.42□□□□□ -2.02
HMGA1P17096 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC2.42□□□□□ -2.02
HMGA1P17096 AL591416.1-201ENST00000404015 867 ntBASIC2.42□□□□□ -2.02
HMGA1P17096 TRAPPC2P10-201ENST00000415662 323 ntBASIC2.42□□□□□ -2.02
HMGA1P17096 AC007390.1-201ENST00000415722 356 ntBASIC2.42□□□□□ -2.02
HMGA1P17096 LINC01688-201ENST00000435492 259 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
HMGA1P17096 CBX1P4-201ENST00000439415 457 ntBASIC2.42□□□□□ -2.02
HMGA1P17096 AC010095.1-201ENST00000443543 144 ntBASIC2.42□□□□□ -2.02
HMGA1P17096 RPL39P40-201ENST00000445481 146 ntBASIC2.42□□□□□ -2.02
HMGA1P17096 BX276092.4-201ENST00000452056 248 ntBASIC2.42□□□□□ -2.02
HMGA1P17096 HSPE1P22-201ENST00000456856 327 ntBASIC2.42□□□□□ -2.02
HMGA1P17096 ATG10-AS1-201ENST00000504846 648 ntBASIC2.42□□□□□ -2.02
HMGA1P17096 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC2.42□□□□□ -2.02
HMGA1P17096 ERP27-202ENST00000540097 993 ntTSL 2 BASIC2.42□□□□□ -2.02
HMGA1P17096 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC2.42□□□□□ -2.02
HMGA1P17096 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC2.42□□□□□ -2.02
HMGA1P17096 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC2.42□□□□□ -2.02
HMGA1P17096 MIR4648-201ENST00000580107 72 ntBASIC2.42□□□□□ -2.02
HMGA1P17096 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.42□□□□□ -2.02
HMGA1P17096 OR51F1-202ENST00000624103 939 ntAPPRIS ALT1 BASIC2.42□□□□□ -2.02
HMGA1P17096 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC2.42□□□□□ -2.02
HMGA1P17096 AC063923.1-201ENST00000478982 1619 ntBASIC2.42□□□□□ -2.02
HMGA1P17096 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
HMGA1P17096 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC2.41□□□□□ -2.02
HMGA1P17096 PHKBP1-201ENST00000450951 1951 ntBASIC2.41□□□□□ -2.02
HMGA1P17096 AC000367.1-201ENST00000452711 1766 ntBASIC2.41□□□□□ -2.02
HMGA1P17096 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC2.41□□□□□ -2.02
HMGA1P17096 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
HMGA1P17096 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.41□□□□□ -2.02
HMGA1P17096 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
HMGA1P17096 CYP3A43-205ENST00000415413 990 ntTSL 5 BASIC2.41□□□□□ -2.02
HMGA1P17096 RPS15AP28-201ENST00000435088 386 ntBASIC2.41□□□□□ -2.02
HMGA1P17096 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC2.41□□□□□ -2.02
HMGA1P17096 AL353705.4-201ENST00000449661 238 ntBASIC2.41□□□□□ -2.02
HMGA1P17096 AC022431.1-201ENST00000450941 438 ntBASIC2.41□□□□□ -2.02
HMGA1P17096 AC243772.1-201ENST00000451620 410 ntBASIC2.41□□□□□ -2.02
HMGA1P17096 MRPL35P4-201ENST00000453682 566 ntBASIC2.41□□□□□ -2.02
HMGA1P17096 LINC00888-204ENST00000487386 421 ntBASIC2.41□□□□□ -2.02
HMGA1P17096 RNU6-826P-201ENST00000516827 104 ntBASIC2.41□□□□□ -2.02
HMGA1P17096 AP000916.1-201ENST00000533869 835 ntBASIC2.41□□□□□ -2.02
HMGA1P17096 AC087897.2-201ENST00000552639 678 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
HMGA1P17096 AC009163.5-201ENST00000575421 637 ntBASIC2.41□□□□□ -2.02
HMGA1P17096 MIR3124-201ENST00000582636 67 ntBASIC2.41□□□□□ -2.02
HMGA1P17096 AC097717.1-230ENST00000597051 738 ntTSL 3 BASIC2.41□□□□□ -2.02
HMGA1P17096 AC136601.2-201ENST00000604356 474 ntBASIC2.41□□□□□ -2.02
HMGA1P17096 AC004943.3-201ENST00000624116 600 ntBASIC2.41□□□□□ -2.02
HMGA1P17096 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
HMGA1P17096 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.41□□□□□ -2.02
HMGA1P17096 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC2.4□□□□□ -2.03
HMGA1P17096 OR6C76-201ENST00000328314 939 ntAPPRIS P1 BASIC2.4□□□□□ -2.03
HMGA1P17096 LSM5-206ENST00000409987 504 ntTSL 5 BASIC2.4□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 104.2 ms