Protein–RNA interactions for Protein: P16234

PDGFRA, Platelet-derived growth factor receptor alpha, humanhuman

Predictions only

Length 1,089 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRAP16234 AC134050.1-201ENST00000495088 933 ntBASIC3.83□□□□□ -1.8
PDGFRAP16234 TPT1P8-201ENST00000510120 555 ntBASIC3.83□□□□□ -1.8
PDGFRAP16234 RN7SKP157-201ENST00000516174 282 ntBASIC3.83□□□□□ -1.8
PDGFRAP16234 CA1-215ENST00000522389 551 ntTSL 3 BASIC3.83□□□□□ -1.8
PDGFRAP16234 AC008489.1-201ENST00000524271 483 ntBASIC3.83□□□□□ -1.8
PDGFRAP16234 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC3.83□□□□□ -1.8
PDGFRAP16234 AC005832.3-201ENST00000537929 631 ntBASIC3.83□□□□□ -1.8
PDGFRAP16234 AC023161.2-201ENST00000551218 780 ntBASIC3.83□□□□□ -1.8
PDGFRAP16234 MTND1P8-201ENST00000571424 950 ntBASIC3.83□□□□□ -1.8
PDGFRAP16234 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC3.83□□□□□ -1.8
PDGFRAP16234 BNIP3P40-201ENST00000596017 556 ntBASIC3.83□□□□□ -1.8
PDGFRAP16234 DUXAP10-204ENST00000612052 616 ntBASIC3.83□□□□□ -1.8
PDGFRAP16234 AC022509.4-201ENST00000621404 572 ntBASIC3.83□□□□□ -1.8
PDGFRAP16234 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
PDGFRAP16234 C7orf66-201ENST00000624695 435 ntTSL 2 BASIC3.83□□□□□ -1.8
PDGFRAP16234 AC092184.1-201ENST00000625042 715 ntBASIC3.83□□□□□ -1.8
PDGFRAP16234 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC3.83□□□□□ -1.8
PDGFRAP16234 OR6C3-203ENST00000641740 1093 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
PDGFRAP16234 AL732372.2-225ENST00000642124 456 ntBASIC3.83□□□□□ -1.8
PDGFRAP16234 AC138915.3-201ENST00000562908 1389 ntBASIC3.83□□□□□ -1.8
PDGFRAP16234 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
PDGFRAP16234 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC3.83□□□□□ -1.8
PDGFRAP16234 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
PDGFRAP16234 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC3.83□□□□□ -1.8
PDGFRAP16234 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
PDGFRAP16234 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
PDGFRAP16234 MFSD8-236ENST00000641509 4050 ntBASIC3.82□□□□□ -1.8
PDGFRAP16234 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
PDGFRAP16234 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
PDGFRAP16234 AC091152.2-201ENST00000591628 2569 ntBASIC3.82□□□□□ -1.8
PDGFRAP16234 AL353746.1-201ENST00000566293 6881 ntBASIC3.82□□□□□ -1.8
PDGFRAP16234 MTCO1P23-201ENST00000415223 1526 ntBASIC3.82□□□□□ -1.8
PDGFRAP16234 CDR1-202ENST00000625883 1485 ntBASIC3.82□□□□□ -1.8
PDGFRAP16234 NACA3P-201ENST00000359690 648 ntBASIC3.82□□□□□ -1.8
PDGFRAP16234 RNU6-560P-201ENST00000364007 108 ntBASIC3.82□□□□□ -1.8
PDGFRAP16234 SNORA73.2-201ENST00000364946 201 ntBASIC3.82□□□□□ -1.8
PDGFRAP16234 SNORA5A-201ENST00000384111 134 ntBASIC3.82□□□□□ -1.8
PDGFRAP16234 MIR200C-201ENST00000384980 68 ntBASIC3.82□□□□□ -1.8
PDGFRAP16234 AL138880.1-201ENST00000405824 642 ntBASIC3.82□□□□□ -1.8
PDGFRAP16234 AL450338.1-201ENST00000407987 512 ntBASIC3.82□□□□□ -1.8
PDGFRAP16234 RNU6-584P-201ENST00000410350 95 ntBASIC3.82□□□□□ -1.8
PDGFRAP16234 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC3.82□□□□□ -1.8
PDGFRAP16234 AC245054.1-201ENST00000420944 258 ntBASIC3.82□□□□□ -1.8
PDGFRAP16234 AL513175.2-201ENST00000422071 443 ntBASIC3.82□□□□□ -1.8
PDGFRAP16234 ZDHHC20P2-201ENST00000424108 429 ntBASIC3.82□□□□□ -1.8
PDGFRAP16234 NANOGP5-201ENST00000424456 877 ntBASIC3.82□□□□□ -1.8
PDGFRAP16234 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC3.82□□□□□ -1.8
PDGFRAP16234 USP9YP24-201ENST00000434374 697 ntBASIC3.82□□□□□ -1.8
PDGFRAP16234 LINC01923-201ENST00000443261 592 ntTSL 5 BASIC3.82□□□□□ -1.8
PDGFRAP16234 USP9YP17-201ENST00000444617 696 ntBASIC3.82□□□□□ -1.8
PDGFRAP16234 PTGES3P5-201ENST00000455109 434 ntBASIC3.82□□□□□ -1.8
PDGFRAP16234 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
PDGFRAP16234 RPS20P24-201ENST00000457473 361 ntBASIC3.82□□□□□ -1.8
PDGFRAP16234 RPS4XP13-201ENST00000483219 789 ntBASIC3.82□□□□□ -1.8
PDGFRAP16234 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC3.82□□□□□ -1.8
PDGFRAP16234 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC3.82□□□□□ -1.8
PDGFRAP16234 PAICSP4-201ENST00000517543 1253 ntBASIC3.82□□□□□ -1.8
PDGFRAP16234 LINC02143-201ENST00000519929 520 ntTSL 3 BASIC3.82□□□□□ -1.8
PDGFRAP16234 AP001636.2-201ENST00000525517 696 ntBASIC3.82□□□□□ -1.8
PDGFRAP16234 AC011853.2-201ENST00000526901 774 ntTSL 5 BASIC3.82□□□□□ -1.8
PDGFRAP16234 MTCYBP41-201ENST00000528913 1123 ntBASIC3.82□□□□□ -1.8
PDGFRAP16234 HIGD1AP17-201ENST00000554576 276 ntBASIC3.82□□□□□ -1.8
PDGFRAP16234 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC3.82□□□□□ -1.8
PDGFRAP16234 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC3.82□□□□□ -1.8
PDGFRAP16234 LINC01255-206ENST00000591431 441 ntTSL 5 BASIC3.82□□□□□ -1.8
PDGFRAP16234 BNIP3P26-201ENST00000600827 554 ntBASIC3.82□□□□□ -1.8
PDGFRAP16234 AC103881.1-201ENST00000603476 538 ntBASIC3.82□□□□□ -1.8
PDGFRAP16234 AC011468.4-201ENST00000603942 409 ntBASIC3.82□□□□□ -1.8
PDGFRAP16234 OR5H6-201ENST00000615035 1113 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
PDGFRAP16234 OR8H2-202ENST00000618136 1038 ntAPPRIS ALT1 BASIC3.82□□□□□ -1.8
PDGFRAP16234 AL732618.1-201ENST00000623251 301 ntBASIC3.82□□□□□ -1.8
PDGFRAP16234 CGA-204ENST00000627148 1010 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
PDGFRAP16234 TEX41-300ENST00000631048 69 ntTSL 5 BASIC3.82□□□□□ -1.8
PDGFRAP16234 AC244205.2-202ENST00000635781 342 ntBASIC3.82□□□□□ -1.8
PDGFRAP16234 OR5H6-202ENST00000641416 1032 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
PDGFRAP16234 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC3.82□□□□□ -1.8
PDGFRAP16234 ST7-221ENST00000465133 2155 ntTSL 5 BASIC3.82□□□□□ -1.8
PDGFRAP16234 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
PDGFRAP16234 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC3.81□□□□□ -1.8
PDGFRAP16234 AC007256.1-201ENST00000392253 2765 ntBASIC3.81□□□□□ -1.8
PDGFRAP16234 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
PDGFRAP16234 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC3.81□□□□□ -1.8
PDGFRAP16234 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
PDGFRAP16234 ARF4-206ENST00000489843 1360 ntTSL 3 BASIC3.81□□□□□ -1.8
PDGFRAP16234 SNRPEP3-201ENST00000338402 276 ntBASIC3.81□□□□□ -1.8
PDGFRAP16234 RNU6-600P-201ENST00000362524 99 ntBASIC3.81□□□□□ -1.8
PDGFRAP16234 RNU4-68P-201ENST00000364314 141 ntBASIC3.81□□□□□ -1.8
PDGFRAP16234 RNU6-629P-201ENST00000384061 103 ntBASIC3.81□□□□□ -1.8
PDGFRAP16234 MIR670-201ENST00000390142 98 ntBASIC3.81□□□□□ -1.8
PDGFRAP16234 TAS2R19-201ENST00000390673 1002 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
PDGFRAP16234 ERHP2-201ENST00000402323 299 ntBASIC3.81□□□□□ -1.8
PDGFRAP16234 AL391417.1-201ENST00000404100 426 ntBASIC3.81□□□□□ -1.8
PDGFRAP16234 HNMT-204ENST00000410115 1150 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
PDGFRAP16234 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC3.81□□□□□ -1.8
PDGFRAP16234 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC3.81□□□□□ -1.8
PDGFRAP16234 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
PDGFRAP16234 HSFY1P1-201ENST00000423928 1178 ntBASIC3.81□□□□□ -1.8
PDGFRAP16234 ARF4P2-201ENST00000430209 526 ntBASIC3.81□□□□□ -1.8
PDGFRAP16234 SETP5-201ENST00000437270 562 ntBASIC3.81□□□□□ -1.8
PDGFRAP16234 MTCO2P25-201ENST00000447065 681 ntBASIC3.81□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 83.2 ms